RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 ANO8Q9HCE9 1232 aaPredicted RBP19.79■□□□□ 0.76
COMMD6-208ENST00000471682 SPINK5Q9NQ38 1064 aaPredicted RBP19.79■□□□□ 0.76
COMMD6-208ENST00000471682 CCDC87Q9NVE4 849 aa19.79■□□□□ 0.76
COMMD6-208ENST00000471682 USP16Q9Y5T5 823 aa19.79■□□□□ 0.76
COMMD6-208ENST00000471682 ERBB4Q15303 1308 aa19.78■□□□□ 0.76
COMMD6-208ENST00000471682 ZNF827Q17R98 1081 aa19.78■□□□□ 0.76
COMMD6-208ENST00000471682 INTS5Q6P9B9 1019 aaKnown RBP19.78■□□□□ 0.76
COMMD6-208ENST00000471682 LAMB4A4D0S4 1761 aa19.78■□□□□ 0.76
COMMD6-208ENST00000471682 QSER1Q2KHR3 1735 aa19.77■□□□□ 0.76
COMMD6-208ENST00000471682 RPS6KA4O75676 772 aa19.77■□□□□ 0.76
COMMD6-208ENST00000471682 ADRA2BP18089 450 aa19.77■□□□□ 0.76
COMMD6-208ENST00000471682 SSFA2P28290 1259 aa19.77■□□□□ 0.76
COMMD6-208ENST00000471682 TRMT2AQ8IZ69 625 aaKnown RBP19.77■□□□□ 0.76
COMMD6-208ENST00000471682 TSR2Q969E8 191 aaKnown RBP19.77■□□□□ 0.76
COMMD6-208ENST00000471682 TFCP2L1Q9NZI6 479 aa19.77■□□□□ 0.76
COMMD6-208ENST00000471682 MYH14Q7Z406 1995 aaKnown RBP19.76■□□□□ 0.75
COMMD6-208ENST00000471682 PRAMEF22A3QJZ6 481 aa19.76■□□□□ 0.75
COMMD6-208ENST00000471682 DUSP27Q5VZP5 1158 aa19.76■□□□□ 0.75
COMMD6-208ENST00000471682 RTCBQ9Y3I0 505 aaKnown RBP19.76■□□□□ 0.75
COMMD6-208ENST00000471682 GNPATO15228 680 aa19.75■□□□□ 0.75
COMMD6-208ENST00000471682 IL6STP40189 918 aaPredicted RBP19.75■□□□□ 0.75
COMMD6-208ENST00000471682 UBR3Q6ZT12 1888 aa19.74■□□□□ 0.75
COMMD6-208ENST00000471682 C8orf58Q8NAV2 365 aa19.74■□□□□ 0.75
COMMD6-208ENST00000471682 KRT24Q2M2I5 525 aa19.73■□□□□ 0.75
COMMD6-208ENST00000471682 ZBTB1Q9Y2K1 713 aa19.73■□□□□ 0.75
COMMD6-208ENST00000471682 PNPLA7Q6ZV29 1317 aa19.73■□□□□ 0.75
COMMD6-208ENST00000471682 A1BGP04217 495 aa19.72■□□□□ 0.75
COMMD6-208ENST00000471682 EIF5P55010 431 aaKnown RBP19.72■□□□□ 0.75
COMMD6-208ENST00000471682 TWISTNBQ3B726 338 aaPredicted RBP19.72■□□□□ 0.75
COMMD6-208ENST00000471682 TRAPPC3LQ5T215 181 aa19.72■□□□□ 0.75
COMMD6-208ENST00000471682 CDCA7LQ96GN5 454 aa19.72■□□□□ 0.75
COMMD6-208ENST00000471682 A0A087WZG4 1122 aa19.71■□□□□ 0.75
COMMD6-208ENST00000471682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.71■□□□□ 0.75
COMMD6-208ENST00000471682 CT47B1P0C2W7 299 aaPredicted RBP19.71■□□□□ 0.75
COMMD6-208ENST00000471682 EXOSC9Q06265 439 aaKnown RBP19.71■□□□□ 0.75
COMMD6-208ENST00000471682 R3HDM1Q15032 1099 aaKnown RBP19.71■□□□□ 0.75
COMMD6-208ENST00000471682 HDGFL1Q5TGJ6 251 aa19.71■□□□□ 0.75
COMMD6-208ENST00000471682 SLC16A10Q8TF71 515 aa19.71■□□□□ 0.75
COMMD6-208ENST00000471682 NBPF26B4DH59 902 aa19.7■□□□□ 0.74
COMMD6-208ENST00000471682 EIF2S2P20042 333 aaKnown RBP19.7■□□□□ 0.74
COMMD6-208ENST00000471682 NBPF10Q6P3W6 841 aaKnown RBP19.7■□□□□ 0.74
COMMD6-208ENST00000471682 NBPF15Q8N660 670 aa19.7■□□□□ 0.74
COMMD6-208ENST00000471682 TSPYL6Q8N831 410 aa19.7■□□□□ 0.74
COMMD6-208ENST00000471682 ZNF428Q96B54 188 aa19.7■□□□□ 0.74
COMMD6-208ENST00000471682 TUBGCP6Q96RT7 1819 aa19.69■□□□□ 0.74
COMMD6-208ENST00000471682 RGL2O15211 777 aa19.69■□□□□ 0.74
COMMD6-208ENST00000471682 VAMP4O75379 141 aa19.69■□□□□ 0.74
COMMD6-208ENST00000471682 CANXP27824 592 aaKnown RBP19.69■□□□□ 0.74
COMMD6-208ENST00000471682 CCDC30Q5VVM6 783 aa19.69■□□□□ 0.74
COMMD6-208ENST00000471682 NPM2Q86SE8 214 aaKnown RBP19.69■□□□□ 0.74
COMMD6-208ENST00000471682 COL23A1Q86Y22 540 aaPredicted RBP19.69■□□□□ 0.74
COMMD6-208ENST00000471682 DDX21Q9NR30 783 aaKnown RBP eCLIP19.69■□□□□ 0.74
COMMD6-208ENST00000471682 DBF4Q9UBU7 674 aaPredicted RBP19.69■□□□□ 0.74
COMMD6-208ENST00000471682 COL15A1P39059 1388 aa19.69■□□□□ 0.74
COMMD6-208ENST00000471682 ELL2O00472 640 aaPredicted RBP19.68■□□□□ 0.74
COMMD6-208ENST00000471682 PDIA6Q15084 440 aa19.68■□□□□ 0.74
COMMD6-208ENST00000471682 AMIGO3Q86WK7 504 aa19.68■□□□□ 0.74
COMMD6-208ENST00000471682 ARHGEF1Q92888 912 aaKnown RBP19.67■□□□□ 0.74
COMMD6-208ENST00000471682 CASZ1Q86V15 1759 aa19.66■□□□□ 0.74
COMMD6-208ENST00000471682 PHF14O94880 888 aa19.66■□□□□ 0.74
COMMD6-208ENST00000471682 RFC4P35249 363 aa19.66■□□□□ 0.74
COMMD6-208ENST00000471682 LRP10Q7Z4F1 713 aa19.66■□□□□ 0.74
COMMD6-208ENST00000471682 HYPKQ9NX55 129 aa19.66■□□□□ 0.74
COMMD6-208ENST00000471682 NARFQ9UHQ1 456 aa19.66■□□□□ 0.74
COMMD6-208ENST00000471682 PSDA5PKW4 1024 aaPredicted RBP19.65■□□□□ 0.74
COMMD6-208ENST00000471682 CHPF2Q9P2E5 772 aa19.65■□□□□ 0.74
COMMD6-208ENST00000471682 STK31Q9BXU1 1019 aa19.64■□□□□ 0.73
COMMD6-208ENST00000471682 USP42Q9H9J4 1324 aaKnown RBP19.64■□□□□ 0.73
COMMD6-208ENST00000471682 CACNA1FO60840 1977 aa19.63■□□□□ 0.73
COMMD6-208ENST00000471682 ZPR1O75312 459 aa19.63■□□□□ 0.73
COMMD6-208ENST00000471682 MTFR1LQ9H019 292 aa19.63■□□□□ 0.73
COMMD6-208ENST00000471682 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
COMMD6-208ENST00000471682 MYL6BP14649 208 aa19.62■□□□□ 0.73
COMMD6-208ENST00000471682 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
COMMD6-208ENST00000471682 DZIP3Q86Y13 1208 aaKnown RBP19.62■□□□□ 0.73
COMMD6-208ENST00000471682 NECTIN2Q92692 538 aa19.62■□□□□ 0.73
COMMD6-208ENST00000471682 ERVV-1B6SEH8 477 aa19.61■□□□□ 0.73
COMMD6-208ENST00000471682 MSH5O43196 834 aa19.61■□□□□ 0.73
COMMD6-208ENST00000471682 PROSER3Q2NL68 480 aa19.61■□□□□ 0.73
COMMD6-208ENST00000471682 CLEC4GQ6UXB4 293 aa19.61■□□□□ 0.73
COMMD6-208ENST00000471682 NLGN1Q8N2Q7 840 aa19.61■□□□□ 0.73
COMMD6-208ENST00000471682 ZNF330Q9Y3S2 320 aaPredicted RBP19.61■□□□□ 0.73
COMMD6-208ENST00000471682 ALDH1L2Q3SY69 923 aa19.6■□□□□ 0.73
COMMD6-208ENST00000471682 SMIM5Q71RC9 77 aa19.6■□□□□ 0.73
COMMD6-208ENST00000471682 PDGFDQ9GZP0 370 aaPredicted RBP19.6■□□□□ 0.73
COMMD6-208ENST00000471682 CAMTA2O94983 1202 aa19.59■□□□□ 0.73
COMMD6-208ENST00000471682 GYS1P13807 737 aa19.59■□□□□ 0.73
COMMD6-208ENST00000471682 KIF6Q6ZMV9 814 aa19.59■□□□□ 0.73
COMMD6-208ENST00000471682 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
COMMD6-208ENST00000471682 MAP3K15Q6ZN16 1313 aa19.58■□□□□ 0.73
COMMD6-208ENST00000471682 ANXA1P04083 346 aa19.58■□□□□ 0.72
COMMD6-208ENST00000471682 SLC4A2P04920 1241 aa19.58■□□□□ 0.72
COMMD6-208ENST00000471682 USPL1Q5W0Q7 1092 aa19.58■□□□□ 0.72
COMMD6-208ENST00000471682 COPS6Q7L5N1 327 aa19.58■□□□□ 0.72
COMMD6-208ENST00000471682 XAGE3Q8WTP9 111 aa19.58■□□□□ 0.72
COMMD6-208ENST00000471682 ZNF652Q9Y2D9 606 aa19.58■□□□□ 0.72
COMMD6-208ENST00000471682 COL24A1Q17RW2 1714 aa19.58■□□□□ 0.72
COMMD6-208ENST00000471682 SCN7AQ01118 1682 aa19.57■□□□□ 0.72
COMMD6-208ENST00000471682 BRPF1P55201 1214 aaPredicted RBP19.57■□□□□ 0.72
COMMD6-208ENST00000471682 SRP68Q9UHB9 627 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms