RNA–Protein interactions for RNA: ENST00000471681.5

CCDC66-213, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 3,120 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-213ENST00000471681 ATF3P18847 181 aa4.67□□□□□ -1.66
CCDC66-213ENST00000471681 PDAP1Q13442 181 aaKnown RBP4.67□□□□□ -1.66
CCDC66-213ENST00000471681 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.67□□□□□ -1.66
CCDC66-213ENST00000471681 STK24Q9Y6E0 443 aa4.67□□□□□ -1.66
CCDC66-213ENST00000471681 DICER1Q9UPY3 1922 aaKnown RBP4.67□□□□□ -1.66
CCDC66-213ENST00000471681 ERBB4Q15303 1308 aa4.67□□□□□ -1.66
CCDC66-213ENST00000471681 MKRN3Q13064 507 aaKnown RBP4.67□□□□□ -1.66
CCDC66-213ENST00000471681 SLC26A8Q96RN1 970 aa4.67□□□□□ -1.66
CCDC66-213ENST00000471681 CHMP4BQ9H444 224 aaKnown RBP4.67□□□□□ -1.66
CCDC66-213ENST00000471681 TRAK1Q9UPV9 953 aa4.67□□□□□ -1.66
CCDC66-213ENST00000471681 MAST2Q6P0Q8 1798 aa4.67□□□□□ -1.66
CCDC66-213ENST00000471681 ST18O60284 1047 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 HMGB1P09429 215 aaKnown RBP4.66□□□□□ -1.66
CCDC66-213ENST00000471681 HOXC9P31274 260 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 KRT28Q7Z3Y7 464 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 WDR63Q8IWG1 891 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 PANK3Q9H999 370 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 CABP1Q9NZU7 370 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 AFDNP55196 1824 aaKnown RBP4.66□□□□□ -1.66
CCDC66-213ENST00000471681 DOCK2Q92608 1830 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 PTGER2P43116 358 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 TICAM2Q86XR7 235 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 PAPPA2Q9BXP8 1791 aa4.66□□□□□ -1.66
CCDC66-213ENST00000471681 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.66□□□□□ -1.66
CCDC66-213ENST00000471681 TESPA1A2RU30 521 aaPredicted RBP4.66□□□□□ -1.66
CCDC66-213ENST00000471681 FOCADQ5VW36 1801 aa4.65□□□□□ -1.66
CCDC66-213ENST00000471681 ANKRD31Q8N7Z5 1873 aa4.65□□□□□ -1.66
CCDC66-213ENST00000471681 ECM29Q5VYK3 1845 aa4.65□□□□□ -1.66
CCDC66-213ENST00000471681 SECISBP2LQ93073 1101 aaKnown RBP4.65□□□□□ -1.66
CCDC66-213ENST00000471681 PDCD7Q8N8D1 485 aaKnown RBP4.65□□□□□ -1.67
CCDC66-213ENST00000471681 POGKQ9P215 609 aa4.65□□□□□ -1.67
CCDC66-213ENST00000471681 ZBED9Q6R2W3 1325 aa4.64□□□□□ -1.67
CCDC66-213ENST00000471681 AMOTQ4VCS5 1084 aa4.64□□□□□ -1.67
CCDC66-213ENST00000471681 NCLP19338 710 aaKnown RBP4.64□□□□□ -1.67
CCDC66-213ENST00000471681 HSPA2P54652 639 aa4.64□□□□□ -1.67
CCDC66-213ENST00000471681 CCDC125Q86Z20 511 aa4.64□□□□□ -1.67
CCDC66-213ENST00000471681 SLC12A5Q9H2X9 1139 aa4.64□□□□□ -1.67
CCDC66-213ENST00000471681 ERVV-2B6SEH9 535 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 GCP02774 474 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 PSEN1P49768 467 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 ARHGEF1Q92888 912 aaKnown RBP4.63□□□□□ -1.67
CCDC66-213ENST00000471681 CABP2Q9NPB3 220 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 RYDENQ9NUL5 291 aaKnown RBP4.63□□□□□ -1.67
CCDC66-213ENST00000471681 TEX2Q8IWB9 1127 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 MYH14Q7Z406 1995 aaKnown RBP4.63□□□□□ -1.67
CCDC66-213ENST00000471681 COL4A1P02462 1669 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 SOX12O15370 315 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 GOLGA2Q08379 1002 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 IPO4Q8TEX9 1081 aaKnown RBP4.63□□□□□ -1.67
CCDC66-213ENST00000471681 KDM4CQ9H3R0 1056 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 KCNG1Q9UIX4 513 aa4.63□□□□□ -1.67
CCDC66-213ENST00000471681 UNC5CLQ8IV45 518 aa4.62□□□□□ -1.67
CCDC66-213ENST00000471681 COG3Q96JB2 828 aa4.62□□□□□ -1.67
CCDC66-213ENST00000471681 ORAI2Q96SN7 254 aa4.62□□□□□ -1.67
CCDC66-213ENST00000471681 TNRC6CQ9HCJ0 1690 aaKnown RBP4.62□□□□□ -1.67
CCDC66-213ENST00000471681 SNED1Q8TER0 1413 aa4.62□□□□□ -1.67
CCDC66-213ENST00000471681 MINK1Q8N4C8 1332 aaPredicted RBP4.62□□□□□ -1.67
CCDC66-213ENST00000471681 DDX60LQ5H9U9 1706 aaKnown RBP4.62□□□□□ -1.67
CCDC66-213ENST00000471681 KNSTRNQ9Y448 316 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 RTL9Q8NET4 1388 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 FER1L6Q2WGJ9 1857 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 COL11A2P13942 1736 aaPredicted RBP4.61□□□□□ -1.67
CCDC66-213ENST00000471681 ZNF772Q68DY9 489 aaPredicted RBP4.61□□□□□ -1.67
CCDC66-213ENST00000471681 C3orf67Q6ZVT6 689 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 CCDC82Q8N4S0 544 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 ADAMTSL1Q8N6G6 1762 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 EIF4A2Q14240 407 aaKnown RBP4.61□□□□□ -1.67
CCDC66-213ENST00000471681 DOK7Q18PE1 504 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 LRP10Q7Z4F1 713 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 WWC1Q8IX03 1113 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 UTYO14607 1347 aa4.61□□□□□ -1.67
CCDC66-213ENST00000471681 HSP90AB1P08238 724 aaKnown RBP4.6□□□□□ -1.67
CCDC66-213ENST00000471681 AKAP4Q5JQC9 854 aa4.6□□□□□ -1.67
CCDC66-213ENST00000471681 RC3H1Q5TC82 1133 aaKnown RBP4.6□□□□□ -1.67
CCDC66-213ENST00000471681 ARHGAP45Q92619 1136 aa4.6□□□□□ -1.67
CCDC66-213ENST00000471681 PCDH11XQ9BZA7 1347 aa4.6□□□□□ -1.67
CCDC66-213ENST00000471681 PCDH11YQ9BZA8 1340 aa4.6□□□□□ -1.67
CCDC66-213ENST00000471681 HOXB1P14653 301 aaPredicted RBP4.6□□□□□ -1.67
CCDC66-213ENST00000471681 CERS3Q8IU89 383 aa4.6□□□□□ -1.67
CCDC66-213ENST00000471681 SPNS2Q8IVW8 549 aa4.6□□□□□ -1.67
CCDC66-213ENST00000471681 RUNDC1Q96C34 613 aa4.6□□□□□ -1.67
CCDC66-213ENST00000471681 PLSCR1O15162 318 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 CLSTN1O94985 981 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 KCTD17Q8N5Z5 321 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 CWC22Q9HCG8 908 aaKnown RBP4.59□□□□□ -1.67
CCDC66-213ENST00000471681 IFT57Q9NWB7 429 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 RGS17Q9UGC6 210 aaPredicted RBP4.59□□□□□ -1.67
CCDC66-213ENST00000471681 THSD7BQ9C0I4 1608 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 CNTNAP4Q9C0A0 1308 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 FAM83GA6ND36 823 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 CHL1O00533 1208 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 LMOD3Q0VAK6 560 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 AK7Q96M32 723 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 PRDM16Q9HAZ2 1276 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 LAMA4Q16363 1823 aa4.59□□□□□ -1.67
CCDC66-213ENST00000471681 GTF2E1P29083 439 aaPredicted RBP4.59□□□□□ -1.68
CCDC66-213ENST00000471681 CALD1Q05682 793 aaKnown RBP4.59□□□□□ -1.68
CCDC66-213ENST00000471681 E2F4Q16254 413 aa4.59□□□□□ -1.68
CCDC66-213ENST00000471681 ALDH1L2Q3SY69 923 aa4.59□□□□□ -1.68
CCDC66-213ENST00000471681 FAM43BQ6ZT52 329 aaPredicted RBP4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 539 ms