RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CCNL1Q9UK58 526 aaPredicted RBP24.62■■□□□ 1.53
PSPC1-203ENST00000471658 TJP1Q07157 1748 aa24.62■■□□□ 1.53
PSPC1-203ENST00000471658 STK31Q9BXU1 1019 aa24.61■■□□□ 1.53
PSPC1-203ENST00000471658 NBPF26B4DH59 902 aa24.6■■□□□ 1.53
PSPC1-203ENST00000471658 STARD3NLO95772 234 aa24.6■■□□□ 1.53
PSPC1-203ENST00000471658 NBPF14Q5TI25 921 aa24.6■■□□□ 1.53
PSPC1-203ENST00000471658 NBPF10Q6P3W6 841 aaKnown RBP24.6■■□□□ 1.53
PSPC1-203ENST00000471658 PROM2Q8N271 834 aa24.6■■□□□ 1.53
PSPC1-203ENST00000471658 NBPF15Q8N660 670 aa24.6■■□□□ 1.53
PSPC1-203ENST00000471658 LINC00116Q8NCU8 138 aa24.6■■□□□ 1.53
PSPC1-203ENST00000471658 FRAT1Q92837 279 aaPredicted RBP24.6■■□□□ 1.53
PSPC1-203ENST00000471658 PHAXQ9H814 394 aaKnown RBP24.6■■□□□ 1.53
PSPC1-203ENST00000471658 LRRC4BQ9NT99 713 aa24.6■■□□□ 1.53
PSPC1-203ENST00000471658 NOB1Q9ULX3 412 aaKnown RBP24.6■■□□□ 1.53
PSPC1-203ENST00000471658 TNS1Q9HBL0 1735 aaKnown RBP24.6■■□□□ 1.53
PSPC1-203ENST00000471658 MYL6BP14649 208 aa24.59■■□□□ 1.53
PSPC1-203ENST00000471658 DBF4Q9UBU7 674 aaPredicted RBP24.59■■□□□ 1.53
PSPC1-203ENST00000471658 LY75O60449 1722 aa24.59■■□□□ 1.53
PSPC1-203ENST00000471658 LAMB4A4D0S4 1761 aa24.58■■□□□ 1.53
PSPC1-203ENST00000471658 PLSCR1O15162 318 aa24.58■■□□□ 1.53
PSPC1-203ENST00000471658 DDX21Q9NR30 783 aaKnown RBP eCLIP24.58■■□□□ 1.53
PSPC1-203ENST00000471658 TNNQ9UQP3 1299 aa24.58■■□□□ 1.53
PSPC1-203ENST00000471658 BRPF1P55201 1214 aaPredicted RBP24.57■■□□□ 1.52
PSPC1-203ENST00000471658 CHMP4AQ9BY43 222 aa24.57■■□□□ 1.52
PSPC1-203ENST00000471658 RNF123Q5XPI4 1314 aa24.57■■□□□ 1.52
PSPC1-203ENST00000471658 RRP1P56182 461 aaKnown RBP24.57■■□□□ 1.52
PSPC1-203ENST00000471658 TXNRD1Q16881 649 aa24.57■■□□□ 1.52
PSPC1-203ENST00000471658 CANXP27824 592 aaKnown RBP24.56■■□□□ 1.52
PSPC1-203ENST00000471658 CRKLP46109 303 aaKnown RBP24.56■■□□□ 1.52
PSPC1-203ENST00000471658 INTS5Q6P9B9 1019 aaKnown RBP24.56■■□□□ 1.52
PSPC1-203ENST00000471658 LRP10Q7Z4F1 713 aa24.56■■□□□ 1.52
PSPC1-203ENST00000471658 ZBTB1Q9Y2K1 713 aa24.56■■□□□ 1.52
PSPC1-203ENST00000471658 EN1Q05925 392 aaPredicted RBP24.54■■□□□ 1.52
PSPC1-203ENST00000471658 ZNF831Q5JPB2 1677 aa24.54■■□□□ 1.52
PSPC1-203ENST00000471658 CCDC87Q9NVE4 849 aa24.53■■□□□ 1.52
PSPC1-203ENST00000471658 ERBB4Q15303 1308 aa24.53■■□□□ 1.52
PSPC1-203ENST00000471658 AIMP1Q12904 312 aaKnown RBP24.53■■□□□ 1.52
PSPC1-203ENST00000471658 FLIIQ13045 1269 aa24.53■■□□□ 1.52
PSPC1-203ENST00000471658 SLC27A3Q5K4L6 730 aa24.53■■□□□ 1.52
PSPC1-203ENST00000471658 DEFB132Q7Z7B7 95 aa24.53■■□□□ 1.52
PSPC1-203ENST00000471658 HYPKQ9NX55 129 aa24.53■■□□□ 1.52
PSPC1-203ENST00000471658 CICQ96RK0 1608 aaPredicted RBP24.53■■□□□ 1.52
PSPC1-203ENST00000471658 EZH2Q15910 746 aaKnown RBP24.52■■□□□ 1.52
PSPC1-203ENST00000471658 C20orf194Q5TEA3 1177 aa24.52■■□□□ 1.52
PSPC1-203ENST00000471658 ILDR2Q71H61 639 aa24.52■■□□□ 1.52
PSPC1-203ENST00000471658 KIF16BQ96L93 1317 aa24.52■■□□□ 1.52
PSPC1-203ENST00000471658 SF3B2Q13435 895 aaKnown RBP24.51■■□□□ 1.51
PSPC1-203ENST00000471658 SMIM5Q71RC9 77 aa24.51■■□□□ 1.51
PSPC1-203ENST00000471658 XAGE3Q8WTP9 111 aa24.51■■□□□ 1.51
PSPC1-203ENST00000471658 CAMKK2Q96RR4 588 aa24.51■■□□□ 1.51
PSPC1-203ENST00000471658 ZNF330Q9Y3S2 320 aaPredicted RBP24.51■■□□□ 1.51
PSPC1-203ENST00000471658 COL5A3P25940 1745 aaPredicted RBP24.51■■□□□ 1.51
PSPC1-203ENST00000471658 IRX6P78412 446 aaPredicted RBP24.5■■□□□ 1.51
PSPC1-203ENST00000471658 ZKSCAN2Q63HK3 967 aa24.5■■□□□ 1.51
PSPC1-203ENST00000471658 COPS6Q7L5N1 327 aa24.5■■□□□ 1.51
PSPC1-203ENST00000471658 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.5■■□□□ 1.51
PSPC1-203ENST00000471658 CLUAP1Q96AJ1 413 aa24.5■■□□□ 1.51
PSPC1-203ENST00000471658 MYH14Q7Z406 1995 aaKnown RBP24.5■■□□□ 1.51
PSPC1-203ENST00000471658 TRIM27P14373 513 aa24.49■■□□□ 1.51
PSPC1-203ENST00000471658 FKBP5Q13451 457 aaPredicted RBP24.49■■□□□ 1.51
PSPC1-203ENST00000471658 ATF7IPQ6VMQ6 1270 aa24.49■■□□□ 1.51
PSPC1-203ENST00000471658 CNTNAP4Q9C0A0 1308 aa24.48■■□□□ 1.51
PSPC1-203ENST00000471658 IPO8O15397 1037 aaKnown RBP24.48■■□□□ 1.51
PSPC1-203ENST00000471658 TTLL7Q6ZT98 887 aa24.48■■□□□ 1.51
PSPC1-203ENST00000471658 TAF1LQ8IZX4 1826 aa24.48■■□□□ 1.51
PSPC1-203ENST00000471658 F6X3S4 739 aa24.47■■□□□ 1.51
PSPC1-203ENST00000471658 BAG6P46379 1132 aa24.47■■□□□ 1.51
PSPC1-203ENST00000471658 RC3H1Q5TC82 1133 aaKnown RBP24.47■■□□□ 1.51
PSPC1-203ENST00000471658 ARHGAP45Q92619 1136 aa24.47■■□□□ 1.51
PSPC1-203ENST00000471658 RLBP1P12271 317 aa24.46■■□□□ 1.51
PSPC1-203ENST00000471658 EIF5P55010 431 aaKnown RBP24.46■■□□□ 1.51
PSPC1-203ENST00000471658 AMIGO3Q86WK7 504 aa24.46■■□□□ 1.51
PSPC1-203ENST00000471658 PANK1Q8TE04 598 aa24.46■■□□□ 1.51
PSPC1-203ENST00000471658 PTPRCP08575 1304 aa24.46■■□□□ 1.51
PSPC1-203ENST00000471658 IL6STP40189 918 aaPredicted RBP24.46■■□□□ 1.51
PSPC1-203ENST00000471658 RREB1Q92766 1687 aa24.45■■□□□ 1.5
PSPC1-203ENST00000471658 CACNA1FO60840 1977 aa24.45■■□□□ 1.5
PSPC1-203ENST00000471658 GNPATO15228 680 aa24.45■■□□□ 1.5
PSPC1-203ENST00000471658 CCDC125Q86Z20 511 aa24.45■■□□□ 1.5
PSPC1-203ENST00000471658 UPF1Q92900 1129 aaKnown RBP eCLIP24.45■■□□□ 1.5
PSPC1-203ENST00000471658 API5Q9BZZ5 524 aaKnown RBP24.45■■□□□ 1.5
PSPC1-203ENST00000471658 C4BP0C0L5 1744 aa24.44■■□□□ 1.5
PSPC1-203ENST00000471658 PI4KAP2A4QPH2 592 aa24.44■■□□□ 1.5
PSPC1-203ENST00000471658 PI4KAP1Q8N8J0 262 aa24.44■■□□□ 1.5
PSPC1-203ENST00000471658 ARXQ96QS3 562 aa24.44■■□□□ 1.5
PSPC1-203ENST00000471658 RPS6KA4O75676 772 aa24.43■■□□□ 1.5
PSPC1-203ENST00000471658 DZIP1LQ8IYY4 767 aaKnown RBP24.43■■□□□ 1.5
PSPC1-203ENST00000471658 AK7Q96M32 723 aa24.43■■□□□ 1.5
PSPC1-203ENST00000471658 TBC1D2BQ9UPU7 963 aa24.43■■□□□ 1.5
PSPC1-203ENST00000471658 ADCY9O60503 1353 aa24.42■■□□□ 1.5
PSPC1-203ENST00000471658 KSR2Q6VAB6 950 aa24.42■■□□□ 1.5
PSPC1-203ENST00000471658 ANKRD13DQ6ZTN6 518 aa24.42■■□□□ 1.5
PSPC1-203ENST00000471658 RGPD3A6NKT7 1758 aaPredicted RBP24.42■■□□□ 1.5
PSPC1-203ENST00000471658 RGPD4Q7Z3J3 1758 aa24.42■■□□□ 1.5
PSPC1-203ENST00000471658 ZNF827Q17R98 1081 aa24.41■■□□□ 1.5
PSPC1-203ENST00000471658 ZBTB3Q9H5J0 574 aa24.41■■□□□ 1.5
PSPC1-203ENST00000471658 MAP3K2Q9Y2U5 619 aa24.41■■□□□ 1.5
PSPC1-203ENST00000471658 DDX58O95786 925 aaKnown RBP24.4■■□□□ 1.5
PSPC1-203ENST00000471658 PDE3AQ14432 1141 aa24.4■■□□□ 1.5
PSPC1-203ENST00000471658 SLC4A10Q6U841 1118 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms