RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 KRT18P05783 430 aaKnown RBP15.16■□□□□ 0.02
PCCB-210ENST00000471595 USHBP1Q8N6Y0 703 aa15.16■□□□□ 0.02
PCCB-210ENST00000471595 HMG20BQ9P0W2 317 aa15.16■□□□□ 0.02
PCCB-210ENST00000471595 NEMFO60524 1076 aa15.16■□□□□ 0.02
PCCB-210ENST00000471595 SDSP20132 328 aa15.16■□□□□ 0.02
PCCB-210ENST00000471595 SFPQP23246 707 aaKnown RBP eCLIP15.16■□□□□ 0.02
PCCB-210ENST00000471595 PER1O15534 1290 aaPredicted RBP15.16■□□□□ 0.02
PCCB-210ENST00000471595 IGHMBP2P38935 993 aaKnown RBP15.16■□□□□ 0.02
PCCB-210ENST00000471595 UBE2HP62256 183 aa15.16■□□□□ 0.02
PCCB-210ENST00000471595 C8orf76Q96K31 380 aa15.16■□□□□ 0.02
PCCB-210ENST00000471595 NPC1L1Q9UHC9 1359 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 GJB2P29033 226 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 PTPN14Q15678 1187 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 LRP2BPQ9P2M1 347 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 CFAP100Q494V2 611 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 PPP1R42Q7Z4L9 355 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 CCDC196A0A1B0GTZ2 297 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 XPCQ01831 940 aaPredicted RBP15.15■□□□□ 0.02
PCCB-210ENST00000471595 MPRIPQ6WCQ1 1025 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 TTC21AQ8NDW8 1320 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 CAVIN2O95810 425 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 ACEP12821 1306 aa15.15■□□□□ 0.02
PCCB-210ENST00000471595 ODF2Q5BJF6 829 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 IQCEQ6IPM2 695 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 DEF6Q9H4E7 631 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 RAI14Q9P0K7 980 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 ZSCAN23Q3MJ62 389 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 USP25Q9UHP3 1055 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 ADGRL2O95490 1459 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 ZFYVE9O95405 1425 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 ZSCAN12O43309 604 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 TMX3Q96JJ7 454 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 MAP3K2Q9Y2U5 619 aa15.14■□□□□ 0.01
PCCB-210ENST00000471595 STK11IPQ8N1F8 1099 aa15.13■□□□□ 0.01
PCCB-210ENST00000471595 ZNF518AQ6AHZ1 1483 aa15.13■□□□□ 0.01
PCCB-210ENST00000471595 CLIP2Q9UDT6 1046 aa15.13■□□□□ 0.01
PCCB-210ENST00000471595 PDE1AP54750 535 aa15.13■□□□□ 0.01
PCCB-210ENST00000471595 LRSAM1Q6UWE0 723 aa15.13■□□□□ 0.01
PCCB-210ENST00000471595 UBXN4Q92575 508 aa15.13■□□□□ 0.01
PCCB-210ENST00000471595 HSP90AB2PQ58FF8 381 aa15.13■□□□□ 0.01
PCCB-210ENST00000471595 FAM177A1Q8N128 213 aaPredicted RBP15.13■□□□□ 0.01
PCCB-210ENST00000471595 KIF18AQ8NI77 898 aa15.13■□□□□ 0.01
PCCB-210ENST00000471595 EPB41L2O43491 1005 aaKnown RBP15.12■□□□□ 0.01
PCCB-210ENST00000471595 AXDND1Q5T1B0 1012 aaPredicted RBP15.12■□□□□ 0.01
PCCB-210ENST00000471595 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
PCCB-210ENST00000471595 CCDC181Q5TID7 509 aa15.12■□□□□ 0.01
PCCB-210ENST00000471595 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
PCCB-210ENST00000471595 MEIS3Q99687 375 aa15.12■□□□□ 0.01
PCCB-210ENST00000471595 PHAXQ9H814 394 aaKnown RBP15.12■□□□□ 0.01
PCCB-210ENST00000471595 TEX14Q8IWB6 1497 aa15.12■□□□□ 0.01
PCCB-210ENST00000471595 HSP90AB3PQ58FF7 597 aa15.12■□□□□ 0.01
PCCB-210ENST00000471595 SMC5Q8IY18 1101 aa15.12■□□□□ 0.01
PCCB-210ENST00000471595 RDXP35241 583 aaKnown RBP15.12■□□□□ 0.01
PCCB-210ENST00000471595 IFIT5Q13325 482 aaKnown RBP15.12■□□□□ 0.01
PCCB-210ENST00000471595 ESYT1Q9BSJ8 1104 aa15.12■□□□□ 0.01
PCCB-210ENST00000471595 ZNF213O14771 459 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 PPIP5K1Q6PFW1 1433 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 PI4KAP2A4QPH2 592 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 GSDMDP57764 484 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 PI4KAP1Q8N8J0 262 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 BMP2KQ9NSY1 1161 aaPredicted RBP15.11■□□□□ 0.01
PCCB-210ENST00000471595 H0YHG0 523 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 ZSCAN22P10073 491 aaPredicted RBP15.11■□□□□ 0.01
PCCB-210ENST00000471595 A0A087WZG4 1122 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 ERLIN2O94905 339 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 STX1AQ16623 288 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 ZBTB40Q9NUA8 1239 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 TMOD3Q9NYL9 352 aa15.11■□□□□ 0.01
PCCB-210ENST00000471595 ADCY5O95622 1261 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 NAPBQ9H115 298 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 TRAPPC8Q9Y2L5 1435 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 ARHGAP29Q52LW3 1261 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
PCCB-210ENST00000471595 ATP8B2P98198 1209 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 MAP3K12Q12852 859 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 SYCP1Q15431 976 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 C8orf58Q8NAV2 365 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 GDPD2Q9HCC8 539 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 RLBP1P12271 317 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 CCDC85AQ96PX6 553 aaPredicted RBP15.1■□□□□ 0.01
PCCB-210ENST00000471595 NEK1Q96PY6 1258 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 ZSCAN16Q9H4T2 348 aaPredicted RBP15.1■□□□□ 0.01
PCCB-210ENST00000471595 DCTPP1Q9H773 170 aa15.1■□□□□ 0.01
PCCB-210ENST00000471595 CKAP2LQ8IYA6 745 aa15.09■□□□□ 0.01
PCCB-210ENST00000471595 CARD14Q9BXL6 1004 aa15.09■□□□□ 0.01
PCCB-210ENST00000471595 TANGO6Q9C0B7 1094 aa15.09■□□□□ 0.01
PCCB-210ENST00000471595 GOLGA6L10A6NI86 522 aa15.09■□□□□ 0.01
PCCB-210ENST00000471595 FSIP1Q8NA03 581 aa15.09■□□□□ 0.01
PCCB-210ENST00000471595 RBM27Q9P2N5 1060 aaKnown RBP15.09■□□□□ 0.01
PCCB-210ENST00000471595 POLKQ9UBT6 870 aa15.09■□□□□ 0.01
PCCB-210ENST00000471595 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
PCCB-210ENST00000471595 GBP3Q9H0R5 595 aa15.09■□□□□ 0.01
PCCB-210ENST00000471595 VAMP4O75379 141 aa15.09■□□□□ 0.01
PCCB-210ENST00000471595 RNF41Q9H4P4 317 aaPredicted RBP15.09■□□□□ 0.01
PCCB-210ENST00000471595 PATL2C9JE40 543 aaKnown RBP15.08■□□□□ 0.01
PCCB-210ENST00000471595 TOP1P11387 765 aaKnown RBP15.08■□□□□ 0.01
PCCB-210ENST00000471595 CLCN1P35523 988 aa15.08■□□□□ 0.01
PCCB-210ENST00000471595 PDCL3Q9H2J4 239 aa15.08■□□□□ 0.01
PCCB-210ENST00000471595 GOLGA8BA8MQT2 603 aa15.08■□□□□ 0
PCCB-210ENST00000471595 XRCC6P12956 609 aaKnown RBP eCLIP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms