RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 GIGYF1O75420 1035 aaPredicted RBP22.94■■□□□ 1.26
COL20A1-205ENST00000471582 BEND3Q5T5X7 828 aa22.94■■□□□ 1.26
COL20A1-205ENST00000471582 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.94■■□□□ 1.26
COL20A1-205ENST00000471582 SPG7Q9UQ90 795 aa22.92■■□□□ 1.26
COL20A1-205ENST00000471582 SCN11AQ9UI33 1791 aa22.92■■□□□ 1.26
COL20A1-205ENST00000471582 ADCY9O60503 1353 aa22.92■■□□□ 1.26
COL20A1-205ENST00000471582 TOM1O60784 492 aa22.92■■□□□ 1.26
COL20A1-205ENST00000471582 DDIT3P35638 169 aa22.92■■□□□ 1.26
COL20A1-205ENST00000471582 USP26Q9BXU7 913 aa22.92■■□□□ 1.26
COL20A1-205ENST00000471582 COL22A1Q8NFW1 1626 aaPredicted RBP22.91■■□□□ 1.26
COL20A1-205ENST00000471582 PI4KAP2A4QPH2 592 aa22.91■■□□□ 1.26
COL20A1-205ENST00000471582 POLA2Q14181 598 aa22.91■■□□□ 1.26
COL20A1-205ENST00000471582 PI4KAP1Q8N8J0 262 aa22.91■■□□□ 1.26
COL20A1-205ENST00000471582 AOX1Q06278 1338 aa22.91■■□□□ 1.26
COL20A1-205ENST00000471582 REC8O95072 547 aa22.9■■□□□ 1.26
COL20A1-205ENST00000471582 STAP2Q9UGK3 403 aa22.9■■□□□ 1.26
COL20A1-205ENST00000471582 RAB11FIP3O75154 756 aa22.9■■□□□ 1.26
COL20A1-205ENST00000471582 MX1P20591 662 aa22.9■■□□□ 1.26
COL20A1-205ENST00000471582 RABEP1Q15276 862 aa22.9■■□□□ 1.26
COL20A1-205ENST00000471582 BCL11AQ9H165 835 aa22.9■■□□□ 1.26
COL20A1-205ENST00000471582 CIZ1Q9ULV3 898 aaPredicted RBP22.9■■□□□ 1.26
COL20A1-205ENST00000471582 HSP90AB1P08238 724 aaKnown RBP22.89■■□□□ 1.25
COL20A1-205ENST00000471582 SPRYD3Q8NCJ5 442 aa22.89■■□□□ 1.25
COL20A1-205ENST00000471582 K7ELQ4 463 aaPredicted RBP22.88■■□□□ 1.25
COL20A1-205ENST00000471582 MEGF6O75095 1541 aa22.88■■□□□ 1.25
COL20A1-205ENST00000471582 CERKQ8TCT0 537 aa22.88■■□□□ 1.25
COL20A1-205ENST00000471582 HYPKQ9NX55 129 aa22.88■■□□□ 1.25
COL20A1-205ENST00000471582 PHLPP1O60346 1717 aa22.88■■□□□ 1.25
COL20A1-205ENST00000471582 KDM6AO15550 1401 aaPredicted RBP22.88■■□□□ 1.25
COL20A1-205ENST00000471582 ALDH1L1O75891 902 aa22.87■■□□□ 1.25
COL20A1-205ENST00000471582 PPP1R42Q7Z4L9 355 aa22.87■■□□□ 1.25
COL20A1-205ENST00000471582 PKD1L3Q7Z443 1732 aa22.87■■□□□ 1.25
COL20A1-205ENST00000471582 COL5A2P05997 1499 aaPredicted RBP22.87■■□□□ 1.25
COL20A1-205ENST00000471582 MRC1P22897 1456 aa22.87■■□□□ 1.25
COL20A1-205ENST00000471582 COL16A1Q07092 1604 aaPredicted RBP22.87■■□□□ 1.25
COL20A1-205ENST00000471582 ERC2O15083 957 aa22.86■■□□□ 1.25
COL20A1-205ENST00000471582 KSR2Q6VAB6 950 aa22.86■■□□□ 1.25
COL20A1-205ENST00000471582 HDAC5Q9UQL6 1122 aa22.86■■□□□ 1.25
COL20A1-205ENST00000471582 WDR17Q8IZU2 1322 aa22.86■■□□□ 1.25
COL20A1-205ENST00000471582 UBAP1LF5GYI3 381 aa22.85■■□□□ 1.25
COL20A1-205ENST00000471582 NBPF7P0C2Y1 421 aaPredicted RBP22.85■■□□□ 1.25
COL20A1-205ENST00000471582 PHKG2P15735 406 aa22.85■■□□□ 1.25
COL20A1-205ENST00000471582 MTX1Q13505 466 aa22.85■■□□□ 1.25
COL20A1-205ENST00000471582 IFNL2Q8IZJ0 200 aa22.85■■□□□ 1.25
COL20A1-205ENST00000471582 SLC52A2Q9HAB3 445 aa22.85■■□□□ 1.25
COL20A1-205ENST00000471582 PIP4K2BP78356 416 aa22.84■■□□□ 1.25
COL20A1-205ENST00000471582 PARP4Q9UKK3 1724 aaKnown RBP22.84■■□□□ 1.25
COL20A1-205ENST00000471582 CD2BP2O95400 341 aaKnown RBP22.84■■□□□ 1.25
COL20A1-205ENST00000471582 ANXA1P04083 346 aa22.84■■□□□ 1.25
COL20A1-205ENST00000471582 HSP90AB4PQ58FF6 505 aa22.84■■□□□ 1.25
COL20A1-205ENST00000471582 DDX21Q9NR30 783 aaKnown RBP eCLIP22.84■■□□□ 1.25
COL20A1-205ENST00000471582 MCM4P33991 863 aa22.83■■□□□ 1.25
COL20A1-205ENST00000471582 ZNF790Q6PG37 636 aa22.83■■□□□ 1.25
COL20A1-205ENST00000471582 RBM42Q9BTD8 480 aaKnown RBP22.83■■□□□ 1.25
COL20A1-205ENST00000471582 SRGAP3O43295 1099 aa22.82■■□□□ 1.24
COL20A1-205ENST00000471582 TOM1L2Q6ZVM7 507 aa22.82■■□□□ 1.24
COL20A1-205ENST00000471582 MAP3K2Q9Y2U5 619 aa22.82■■□□□ 1.24
COL20A1-205ENST00000471582 SURF6O75683 361 aaKnown RBP22.82■■□□□ 1.24
COL20A1-205ENST00000471582 DDX58O95786 925 aaKnown RBP22.82■■□□□ 1.24
COL20A1-205ENST00000471582 PROSER3Q2NL68 480 aa22.82■■□□□ 1.24
COL20A1-205ENST00000471582 KIF1BPQ96EK5 621 aa22.82■■□□□ 1.24
COL20A1-205ENST00000471582 C5P01031 1676 aa22.81■■□□□ 1.24
COL20A1-205ENST00000471582 RHPN1Q8TCX5 695 aa22.8■■□□□ 1.24
COL20A1-205ENST00000471582 DCAF5Q96JK2 942 aa22.8■■□□□ 1.24
COL20A1-205ENST00000471582 COL14A1Q05707 1796 aaKnown RBP22.8■■□□□ 1.24
COL20A1-205ENST00000471582 LINS1Q8NG48 757 aa22.8■■□□□ 1.24
COL20A1-205ENST00000471582 PRAMEF22A3QJZ6 481 aa22.79■■□□□ 1.24
COL20A1-205ENST00000471582 UTYO14607 1347 aa22.79■■□□□ 1.24
COL20A1-205ENST00000471582 HSP90AA1P07900 732 aaKnown RBP22.78■■□□□ 1.24
COL20A1-205ENST00000471582 PDIA6Q15084 440 aa22.78■■□□□ 1.24
COL20A1-205ENST00000471582 TSHZ3Q63HK5 1081 aa22.78■■□□□ 1.24
COL20A1-205ENST00000471582 ESYT1Q9BSJ8 1104 aa22.78■■□□□ 1.24
COL20A1-205ENST00000471582 C9orf78Q9NZ63 289 aaPredicted RBP22.77■■□□□ 1.24
COL20A1-205ENST00000471582 EPB41L2O43491 1005 aaKnown RBP22.76■■□□□ 1.23
COL20A1-205ENST00000471582 CHMLP26374 656 aa22.76■■□□□ 1.23
COL20A1-205ENST00000471582 EVA1CP58658 441 aa22.76■■□□□ 1.23
COL20A1-205ENST00000471582 RAB3GAP1Q15042 981 aa22.76■■□□□ 1.23
COL20A1-205ENST00000471582 CARD10Q9BWT7 1032 aa22.76■■□□□ 1.23
COL20A1-205ENST00000471582 IL1RAPL2Q9NP60 686 aa22.76■■□□□ 1.23
COL20A1-205ENST00000471582 DDX11L8A8MPP1 907 aa22.76■■□□□ 1.23
COL20A1-205ENST00000471582 ST18O60284 1047 aa22.76■■□□□ 1.23
COL20A1-205ENST00000471582 NFATC2IPQ8NCF5 419 aa22.76■■□□□ 1.23
COL20A1-205ENST00000471582 USP42Q9H9J4 1324 aaKnown RBP22.75■■□□□ 1.23
COL20A1-205ENST00000471582 CYP27B1O15528 508 aa22.75■■□□□ 1.23
COL20A1-205ENST00000471582 PCDH11XQ9BZA7 1347 aa22.75■■□□□ 1.23
COL20A1-205ENST00000471582 PCDH11YQ9BZA8 1340 aa22.75■■□□□ 1.23
COL20A1-205ENST00000471582 TRIM6-TRIM34B2RNG4 842 aa22.74■■□□□ 1.23
COL20A1-205ENST00000471582 SLC39A6Q13433 755 aa22.74■■□□□ 1.23
COL20A1-205ENST00000471582 STRN4Q9NRL3 753 aa22.74■■□□□ 1.23
COL20A1-205ENST00000471582 GRM8O00222 908 aa22.73■■□□□ 1.23
COL20A1-205ENST00000471582 ERC1Q8IUD2 1116 aa22.73■■□□□ 1.23
COL20A1-205ENST00000471582 PI4K2BQ8TCG2 481 aa22.73■■□□□ 1.23
COL20A1-205ENST00000471582 RILPL2Q969X0 211 aa22.73■■□□□ 1.23
COL20A1-205ENST00000471582 BTG4Q9NY30 223 aa22.73■■□□□ 1.23
COL20A1-205ENST00000471582 IL2RBP14784 551 aa22.72■■□□□ 1.23
COL20A1-205ENST00000471582 ANAPC15P60006 121 aa22.72■■□□□ 1.23
COL20A1-205ENST00000471582 LARP1Q6PKG0 1096 aaKnown RBP22.72■■□□□ 1.23
COL20A1-205ENST00000471582 ZCRB1Q8TBF4 217 aaKnown RBP22.72■■□□□ 1.23
COL20A1-205ENST00000471582 IL17RAQ96F46 866 aa22.72■■□□□ 1.23
COL20A1-205ENST00000471582 TTC41PQ6P2S7 1318 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms