RNA–Protein interactions for RNA: ENST00000471471.1

GTF2B-205, Transcript of general transcription factor IIB, humanhuman

TSL 3

Gene GTF2B, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-205ENST00000471471 PIM2Q9P1W9 311 aa9.35□□□□□ -0.91
GTF2B-205ENST00000471471 LOC102724428A0A0B4J2F2 783 aa9.34□□□□□ -0.91
GTF2B-205ENST00000471471 HSPA8P11142 646 aaKnown RBP9.34□□□□□ -0.91
GTF2B-205ENST00000471471 SIK1P57059 783 aa9.34□□□□□ -0.91
GTF2B-205ENST00000471471 TMF1P82094 1093 aa9.34□□□□□ -0.91
GTF2B-205ENST00000471471 RASSF7Q02833 373 aa9.34□□□□□ -0.91
GTF2B-205ENST00000471471 NLGN1Q8N2Q7 840 aa9.34□□□□□ -0.91
GTF2B-205ENST00000471471 PIGBQ92521 554 aa9.34□□□□□ -0.91
GTF2B-205ENST00000471471 AIDAQ96BJ3 306 aa9.34□□□□□ -0.91
GTF2B-205ENST00000471471 ITGB4P16144 1822 aa9.33□□□□□ -0.92
GTF2B-205ENST00000471471 PDE4DIPQ5VU43 2346 aa9.33□□□□□ -0.92
GTF2B-205ENST00000471471 CCDC85CA6NKD9 419 aa9.33□□□□□ -0.92
GTF2B-205ENST00000471471 HOXC9P31274 260 aa9.33□□□□□ -0.92
GTF2B-205ENST00000471471 VEGFBP49765 207 aa9.33□□□□□ -0.92
GTF2B-205ENST00000471471 NBPF6Q5VWK0 638 aa9.33□□□□□ -0.92
GTF2B-205ENST00000471471 IFNL1Q8IU54 200 aa9.33□□□□□ -0.92
GTF2B-205ENST00000471471 NBPF4Q96M43 638 aa9.33□□□□□ -0.92
GTF2B-205ENST00000471471 CGNL1Q0VF96 1302 aa9.32□□□□□ -0.92
GTF2B-205ENST00000471471 CYP27B1O15528 508 aa9.32□□□□□ -0.92
GTF2B-205ENST00000471471 GYS1P13807 737 aa9.32□□□□□ -0.92
GTF2B-205ENST00000471471 FAM212AQ96EL1 285 aa9.32□□□□□ -0.92
GTF2B-205ENST00000471471 VIRMAQ69YN4 1812 aaKnown RBP9.32□□□□□ -0.92
GTF2B-205ENST00000471471 MAP3K19Q56UN5 1328 aa9.31□□□□□ -0.92
GTF2B-205ENST00000471471 LMNB1P20700 586 aa9.31□□□□□ -0.92
GTF2B-205ENST00000471471 FBLN1P23142 703 aa9.31□□□□□ -0.92
GTF2B-205ENST00000471471 CHRNA5P30532 468 aa9.31□□□□□ -0.92
GTF2B-205ENST00000471471 USHBP1Q8N6Y0 703 aa9.31□□□□□ -0.92
GTF2B-205ENST00000471471 PASKQ96RG2 1323 aa9.31□□□□□ -0.92
GTF2B-205ENST00000471471 PCDH11XQ9BZA7 1347 aa9.31□□□□□ -0.92
GTF2B-205ENST00000471471 PCDH11YQ9BZA8 1340 aa9.31□□□□□ -0.92
GTF2B-205ENST00000471471 TRAPPC3LQ5T215 181 aa9.3□□□□□ -0.92
GTF2B-205ENST00000471471 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
GTF2B-205ENST00000471471 PARP3Q9Y6F1 533 aa9.3□□□□□ -0.92
GTF2B-205ENST00000471471 TIAM2Q8IVF5 1701 aa9.3□□□□□ -0.92
GTF2B-205ENST00000471471 ATP6V1AP38606 617 aa9.29□□□□□ -0.92
GTF2B-205ENST00000471471 DDR1Q08345 913 aa9.29□□□□□ -0.92
GTF2B-205ENST00000471471 RAPGEF4Q8WZA2 1011 aa9.29□□□□□ -0.92
GTF2B-205ENST00000471471 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
GTF2B-205ENST00000471471 ASAP1Q9ULH1 1129 aa9.29□□□□□ -0.92
GTF2B-205ENST00000471471 EDC4Q6P2E9 1401 aaKnown RBP9.29□□□□□ -0.92
GTF2B-205ENST00000471471 TATP17735 454 aaPredicted RBP9.28□□□□□ -0.92
GTF2B-205ENST00000471471 IRX5P78411 483 aaPredicted RBP9.28□□□□□ -0.92
GTF2B-205ENST00000471471 NKX1-1Q15270 411 aaPredicted RBP9.28□□□□□ -0.92
GTF2B-205ENST00000471471 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
GTF2B-205ENST00000471471 RTCBQ9Y3I0 505 aaKnown RBP9.28□□□□□ -0.92
GTF2B-205ENST00000471471 KDRP35968 1356 aa9.27□□□□□ -0.93
GTF2B-205ENST00000471471 NFKBIEO00221 500 aa9.27□□□□□ -0.93
GTF2B-205ENST00000471471 PLCG2P16885 1265 aa9.27□□□□□ -0.93
GTF2B-205ENST00000471471 AMPHP49418 695 aa9.27□□□□□ -0.93
GTF2B-205ENST00000471471 CDAN1Q8IWY9 1227 aa9.27□□□□□ -0.93
GTF2B-205ENST00000471471 SLAIN1Q8ND83 568 aa9.27□□□□□ -0.93
GTF2B-205ENST00000471471 TMEM88BA6NKF7 163 aa9.26□□□□□ -0.93
GTF2B-205ENST00000471471 SLC12A5Q9H2X9 1139 aa9.26□□□□□ -0.93
GTF2B-205ENST00000471471 ATG3Q9NT62 314 aa9.26□□□□□ -0.93
GTF2B-205ENST00000471471 A0A1W2PP64 1363 aa9.25□□□□□ -0.93
GTF2B-205ENST00000471471 RASSF10A6NK89 507 aa9.25□□□□□ -0.93
GTF2B-205ENST00000471471 ITGBL1O95965 494 aaPredicted RBP9.25□□□□□ -0.93
GTF2B-205ENST00000471471 RFC4P35249 363 aa9.25□□□□□ -0.93
GTF2B-205ENST00000471471 MAP2K1Q02750 393 aaPredicted RBP9.25□□□□□ -0.93
GTF2B-205ENST00000471471 FKBP8Q14318 412 aa9.25□□□□□ -0.93
GTF2B-205ENST00000471471 RC3H1Q5TC82 1133 aaKnown RBP9.25□□□□□ -0.93
GTF2B-205ENST00000471471 CCDC88AQ3V6T2 1871 aa9.25□□□□□ -0.93
GTF2B-205ENST00000471471 RTL1A6NKG5 1358 aa9.24□□□□□ -0.93
GTF2B-205ENST00000471471 POLRMTO00411 1230 aaKnown RBP9.24□□□□□ -0.93
GTF2B-205ENST00000471471 ST18O60284 1047 aa9.24□□□□□ -0.93
GTF2B-205ENST00000471471 RPS6KA4O75676 772 aa9.24□□□□□ -0.93
GTF2B-205ENST00000471471 DPY19L2Q6NUT2 758 aa9.24□□□□□ -0.93
GTF2B-205ENST00000471471 TMOD3Q9NYL9 352 aa9.24□□□□□ -0.93
GTF2B-205ENST00000471471 SRP68Q9UHB9 627 aaKnown RBP9.24□□□□□ -0.93
GTF2B-205ENST00000471471 COL5A3P25940 1745 aaPredicted RBP9.24□□□□□ -0.93
GTF2B-205ENST00000471471 CNTNAP4Q9C0A0 1308 aa9.24□□□□□ -0.93
GTF2B-205ENST00000471471 WDR33Q9C0J8 1336 aaKnown RBP9.24□□□□□ -0.93
GTF2B-205ENST00000471471 MYH14Q7Z406 1995 aaKnown RBP9.23□□□□□ -0.93
GTF2B-205ENST00000471471 TM4SF1P30408 202 aa9.23□□□□□ -0.93
GTF2B-205ENST00000471471 RRS1Q15050 365 aaKnown RBP9.23□□□□□ -0.93
GTF2B-205ENST00000471471 HDGFL2Q7Z4V5 671 aaPredicted RBP9.23□□□□□ -0.93
GTF2B-205ENST00000471471 MCOLN1Q9GZU1 580 aa9.23□□□□□ -0.93
GTF2B-205ENST00000471471 USP42Q9H9J4 1324 aaKnown RBP9.23□□□□□ -0.93
GTF2B-205ENST00000471471 THSD7BQ9C0I4 1608 aa9.23□□□□□ -0.93
GTF2B-205ENST00000471471 ZNF831Q5JPB2 1677 aa9.23□□□□□ -0.93
GTF2B-205ENST00000471471 DDNO94850 711 aaPredicted RBP9.22□□□□□ -0.93
GTF2B-205ENST00000471471 DEFB115Q30KQ5 88 aa9.22□□□□□ -0.93
GTF2B-205ENST00000471471 LDHDQ86WU2 507 aa9.22□□□□□ -0.93
GTF2B-205ENST00000471471 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
GTF2B-205ENST00000471471 CFAP44Q96MT7 982 aa9.22□□□□□ -0.93
GTF2B-205ENST00000471471 OCEL1Q9H607 264 aa9.22□□□□□ -0.93
GTF2B-205ENST00000471471 DLEC1Q9Y238 1755 aa9.22□□□□□ -0.93
GTF2B-205ENST00000471471 ERFEQ4G0M1 354 aa9.21□□□□□ -0.94
GTF2B-205ENST00000471471 HSP90AB2PQ58FF8 381 aa9.21□□□□□ -0.94
GTF2B-205ENST00000471471 PRPF38BQ5VTL8 546 aaKnown RBP9.21□□□□□ -0.94
GTF2B-205ENST00000471471 COG3Q96JB2 828 aa9.21□□□□□ -0.94
GTF2B-205ENST00000471471 INSRP06213 1382 aa9.21□□□□□ -0.94
GTF2B-205ENST00000471471 NCAPD2Q15021 1401 aa9.21□□□□□ -0.94
GTF2B-205ENST00000471471 SMG6Q86US8 1419 aaKnown RBP9.21□□□□□ -0.94
GTF2B-205ENST00000471471 DICER1Q9UPY3 1922 aaKnown RBP9.21□□□□□ -0.94
GTF2B-205ENST00000471471 ADAMTS7Q9UKP4 1686 aa9.2□□□□□ -0.94
GTF2B-205ENST00000471471 LTBP1Q14766 1721 aa9.2□□□□□ -0.94
GTF2B-205ENST00000471471 ADAMTSL1Q8N6G6 1762 aa9.2□□□□□ -0.94
GTF2B-205ENST00000471471 TTLL6Q8N841 843 aa9.2□□□□□ -0.94
GTF2B-205ENST00000471471 TMEM121BQ9BXQ6 578 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms