RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	CYP2U1	Q7Z449	544 aa		5.77	□□□□□ -1.49
CSMD2-208	ENST00000471438	PNMA1	Q8ND90	353 aa		5.77	□□□□□ -1.49
CSMD2-208	ENST00000471438	ATP1B4	Q9UN42	357 aa	Predicted RBP	5.77	□□□□□ -1.49
CSMD2-208	ENST00000471438	ERVK-9	P63128	1117 aa		5.76	□□□□□ -1.49
CSMD2-208	ENST00000471438	TRIM26	Q12899	539 aa	Predicted RBP	5.76	□□□□□ -1.49
CSMD2-208	ENST00000471438	PCGF6	Q9BYE7	350 aa		5.76	□□□□□ -1.49
CSMD2-208	ENST00000471438	ARHGEF10L	Q9HCE6	1279 aa		5.76	□□□□□ -1.49
CSMD2-208	ENST00000471438	NDFIP2	Q9NV92	336 aa		5.76	□□□□□ -1.49
CSMD2-208	ENST00000471438	ADH6	P28332	368 aa		5.75	□□□□□ -1.49
CSMD2-208	ENST00000471438	GIGYF1	O75420	1035 aa	Predicted RBP	5.74	□□□□□ -1.49
CSMD2-208	ENST00000471438	MSX1	P28360	303 aa		5.74	□□□□□ -1.49
CSMD2-208	ENST00000471438	GTF2E1	P29083	439 aa	Predicted RBP	5.74	□□□□□ -1.49
CSMD2-208	ENST00000471438	CCDC125	Q86Z20	511 aa		5.74	□□□□□ -1.49
CSMD2-208	ENST00000471438	NACC1	Q96RE7	527 aa		5.74	□□□□□ -1.49
CSMD2-208	ENST00000471438	POLR3E	Q9NVU0	708 aa		5.74	□□□□□ -1.49
CSMD2-208	ENST00000471438	ATAD2B	Q9ULI0	1458 aa		5.74	□□□□□ -1.49
CSMD2-208	ENST00000471438	CEP164	Q9UPV0	1460 aa		5.74	□□□□□ -1.49
CSMD2-208	ENST00000471438	ARID1B	Q8NFD5	2236 aa	Predicted RBP	5.73	□□□□□ -1.49
CSMD2-208	ENST00000471438	H2AFB1	P0C5Y9	115 aa		5.73	□□□□□ -1.49
CSMD2-208	ENST00000471438	H2AFB2	P0C5Z0	115 aa		5.73	□□□□□ -1.49
CSMD2-208	ENST00000471438	ZEB1	P37275	1124 aa	Predicted RBP	5.73	□□□□□ -1.49
CSMD2-208	ENST00000471438	GNAS	Q5JWF2	1037 aa		5.73	□□□□□ -1.49
CSMD2-208	ENST00000471438	FCHSD1	Q86WN1	690 aa		5.73	□□□□□ -1.49
CSMD2-208	ENST00000471438	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	5.73	□□□□□ -1.49
CSMD2-208	ENST00000471438	GPBP1L1	Q9HC44	474 aa	Predicted RBP	5.73	□□□□□ -1.49
CSMD2-208	ENST00000471438	CENPC	Q03188	943 aa		5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	FBXO31	Q5XUX0	539 aa	Predicted RBP	5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	FIGNL1	Q6PIW4	674 aa		5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	CNKSR1	Q969H4	720 aa		5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	DDRGK1	Q96HY6	314 aa		5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	KDM4C	Q9H3R0	1056 aa		5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	ESF1	Q9H501	851 aa	Known RBP	5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	AVEN	Q9NQS1	362 aa	Predicted RBP	5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	RAB6B	Q9NRW1	208 aa		5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	KLF15	Q9UIH9	416 aa		5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	ZNF608	Q9ULD9	1512 aa	Predicted RBP	5.72	□□□□□ -1.49
CSMD2-208	ENST00000471438	COL17A1	Q9UMD9	1497 aa	Predicted RBP	5.71	□□□□□ -1.49
CSMD2-208	ENST00000471438	LOC105371045	A0A1W2PR82	267 aa		5.71	□□□□□ -1.5
CSMD2-208	ENST00000471438	TMEM214	Q6NUQ4	689 aa	Known RBP	5.71	□□□□□ -1.5
CSMD2-208	ENST00000471438	ESYT1	Q9BSJ8	1104 aa		5.71	□□□□□ -1.5
CSMD2-208	ENST00000471438	FAM117A	Q9C073	453 aa		5.71	□□□□□ -1.5
CSMD2-208	ENST00000471438	PCDHGC4	Q9Y5F7	938 aa		5.71	□□□□□ -1.5
CSMD2-208	ENST00000471438	GAPVD1	Q14C86	1478 aa		5.71	□□□□□ -1.5
CSMD2-208	ENST00000471438	FAM229A	H3BQW9	127 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	SCTR	P47872	440 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	SKIV2L	Q15477	1246 aa	Known RBP	5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	C4orf17	Q53FE4	359 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	RNF20	Q5VTR2	975 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	EPS8L1	Q8TE68	723 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	FMNL2	Q96PY5	1086 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	KRTAP4-9	Q9BYQ8	210 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	CRISPLD1	Q9H336	500 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	OSBPL3	Q9H4L5	887 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	PCDHB9	Q9Y5E1	797 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	SMARCA4	P51532	1647 aa		5.7	□□□□□ -1.5
CSMD2-208	ENST00000471438	CLASP1	Q7Z460	1538 aa		5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	EIF4G3	O43432	1585 aa	Known RBP	5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	TRAK2	O60296	914 aa		5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	IL2RA	P01589	272 aa		5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	ELN	P15502	786 aa		5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	TRIM28	Q13263	835 aa	Known RBP	5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	FZD5	Q13467	585 aa		5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	SH3D19	Q5HYK7	790 aa		5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	ZCCHC2	Q9C0B9	1178 aa	Known RBP	5.69	□□□□□ -1.5
CSMD2-208	ENST00000471438	GNRH1	P01148	92 aa		5.68	□□□□□ -1.5
CSMD2-208	ENST00000471438	PCBP4	P57723	403 aa	Known RBP	5.68	□□□□□ -1.5
CSMD2-208	ENST00000471438	FAM182B	Q5T319	152 aa		5.68	□□□□□ -1.5
CSMD2-208	ENST00000471438	BAZ1B	Q9UIG0	1483 aa	Known RBP	5.68	□□□□□ -1.5
CSMD2-208	ENST00000471438	ATXN7	O15265	892 aa	Predicted RBP	5.67	□□□□□ -1.5
CSMD2-208	ENST00000471438	CD33	P20138	364 aa		5.67	□□□□□ -1.5
CSMD2-208	ENST00000471438	ALAS2	P22557	587 aa		5.67	□□□□□ -1.5
CSMD2-208	ENST00000471438	GRIK4	Q16099	956 aa		5.67	□□□□□ -1.5
CSMD2-208	ENST00000471438	DNAAF2	Q9NVR5	837 aa	Known RBP	5.67	□□□□□ -1.5
CSMD2-208	ENST00000471438	PRR12	Q9ULL5	1215 aa		5.67	□□□□□ -1.5
CSMD2-208	ENST00000471438	DCDC2B	A2VCK2	349 aa		5.66	□□□□□ -1.5
CSMD2-208	ENST00000471438	C9orf172	C9J069	976 aa		5.66	□□□□□ -1.5
CSMD2-208	ENST00000471438	AP1G2	O75843	785 aa		5.66	□□□□□ -1.5
CSMD2-208	ENST00000471438	PROCA1	Q8NCQ7	364 aa	Predicted RBP	5.66	□□□□□ -1.5
CSMD2-208	ENST00000471438	PCDHB11	Q9Y5F2	797 aa		5.66	□□□□□ -1.5
CSMD2-208	ENST00000471438	TOP2B	Q02880	1626 aa		5.66	□□□□□ -1.5
CSMD2-208	ENST00000471438	ELOA3C	A0A087WX78	387 aa	Predicted RBP	5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	ELOA3D	A6NLF2	546 aa	Predicted RBP	5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	MAPT	P10636	758 aa	Known RBP	5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	ELOA3B	Q3SY89	546 aa		5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	ZNF468	Q5VIY5	522 aa	Predicted RBP	5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	NLRP8	Q86W28	1048 aa		5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	PPARGC1B	Q86YN6	1023 aa	Known RBP	5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	ELOA3	Q8NG57	546 aa		5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	RHBDD1	Q8TEB9	315 aa		5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	FHDC1	Q9C0D6	1143 aa	Predicted RBP	5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	HRH3	Q9Y5N1	445 aa		5.65	□□□□□ -1.5
CSMD2-208	ENST00000471438	TSPOAP1	O95153	1857 aa		5.64	□□□□□ -1.51
CSMD2-208	ENST00000471438	MROH2B	Q7Z745	1585 aa		5.64	□□□□□ -1.51
CSMD2-208	ENST00000471438	KHNYN	O15037	678 aa	Known RBP	5.64	□□□□□ -1.51
CSMD2-208	ENST00000471438	TNP2	Q05952	138 aa		5.64	□□□□□ -1.51
CSMD2-208	ENST00000471438	FAM69C	Q0P6D2	419 aa		5.64	□□□□□ -1.51
CSMD2-208	ENST00000471438	ADGRE1	Q14246	886 aa		5.64	□□□□□ -1.51
CSMD2-208	ENST00000471438	TBC1D9	Q6ZT07	1266 aa		5.64	□□□□□ -1.51
CSMD2-208	ENST00000471438	TP53INP1	Q96A56	240 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms