RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 GGCXP38435 758 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 SMTNP53814 917 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 EHHADHQ08426 723 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 MTFR1Q15390 333 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 ALKBH2Q6NS38 261 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 STAG2Q8N3U4 1231 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 PARP2Q9UGN5 583 aa10.36□□□□□ -0.75
SMC5-202ENST00000471372 SCAMP3O14828 347 aaKnown RBP10.35□□□□□ -0.75
SMC5-202ENST00000471372 MYT1Q01538 1121 aa10.35□□□□□ -0.75
SMC5-202ENST00000471372 PPP1R26Q5T8A7 1209 aaPredicted RBP10.35□□□□□ -0.75
SMC5-202ENST00000471372 RC3H1Q5TC82 1133 aaKnown RBP10.35□□□□□ -0.75
SMC5-202ENST00000471372 ATCAYQ86WG3 371 aa10.35□□□□□ -0.75
SMC5-202ENST00000471372 ANKLE1Q8NAG6 615 aa10.35□□□□□ -0.75
SMC5-202ENST00000471372 DMRTB1Q96MA1 342 aa10.35□□□□□ -0.75
SMC5-202ENST00000471372 FAM129BQ96TA1 746 aa10.35□□□□□ -0.75
SMC5-202ENST00000471372 DUSP9Q99956 384 aaKnown RBP10.35□□□□□ -0.75
SMC5-202ENST00000471372 WWC3Q9ULE0 1092 aa10.35□□□□□ -0.75
SMC5-202ENST00000471372 PSMA6P60900 246 aaKnown RBP10.34□□□□□ -0.75
SMC5-202ENST00000471372 XPCQ01831 940 aaPredicted RBP10.34□□□□□ -0.75
SMC5-202ENST00000471372 ESCO1Q5FWF5 840 aa10.34□□□□□ -0.75
SMC5-202ENST00000471372 SETDB2Q96T68 719 aa10.34□□□□□ -0.75
SMC5-202ENST00000471372 ARHGEF10LQ9HCE6 1279 aa10.34□□□□□ -0.75
SMC5-202ENST00000471372 NRG2O14511 850 aaPredicted RBP10.33□□□□□ -0.76
SMC5-202ENST00000471372 PRPF40AO75400 957 aaKnown RBP10.33□□□□□ -0.76
SMC5-202ENST00000471372 CCDC116Q8IYX3 515 aa10.33□□□□□ -0.76
SMC5-202ENST00000471372 IL2RAP01589 272 aa10.32□□□□□ -0.76
SMC5-202ENST00000471372 SH3PXD2AQ5TCZ1 1133 aa10.32□□□□□ -0.76
SMC5-202ENST00000471372 MYO19Q96H55 970 aa10.32□□□□□ -0.76
SMC5-202ENST00000471372 NGLY1Q96IV0 654 aa10.32□□□□□ -0.76
SMC5-202ENST00000471372 IQSEC3Q9UPP2 1182 aaPredicted RBP10.32□□□□□ -0.76
SMC5-202ENST00000471372 LCE2BO14633 110 aa10.31□□□□□ -0.76
SMC5-202ENST00000471372 TMEM87AQ8NBN3 555 aa10.31□□□□□ -0.76
SMC5-202ENST00000471372 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
SMC5-202ENST00000471372 MRS2Q9HD23 443 aa10.31□□□□□ -0.76
SMC5-202ENST00000471372 PPP1R1BQ9UD71 204 aaPredicted RBP10.31□□□□□ -0.76
SMC5-202ENST00000471372 SIAH2O43255 324 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 ADH1CP00326 375 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 NR3C2P08235 984 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 RAD51AP2Q09MP3 1159 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 PDE3BQ13370 1112 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 TMC4Q7Z404 712 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 MPNDQ8N594 471 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 ABTB2Q8N961 1025 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 ALKBH8Q96BT7 664 aaKnown RBP10.3□□□□□ -0.76
SMC5-202ENST00000471372 XAGE2Q96GT9 111 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 NIF3L1Q9GZT8 377 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 POLIQ9UNA4 740 aa10.3□□□□□ -0.76
SMC5-202ENST00000471372 CDK2AP1O14519 115 aa10.29□□□□□ -0.76
SMC5-202ENST00000471372 RPIAP49247 311 aa10.29□□□□□ -0.76
SMC5-202ENST00000471372 DAB2P98082 770 aa10.29□□□□□ -0.76
SMC5-202ENST00000471372 TLR1Q15399 786 aa10.29□□□□□ -0.76
SMC5-202ENST00000471372 POTEAQ6S8J7 498 aa10.29□□□□□ -0.76
SMC5-202ENST00000471372 FAM177A1Q8N128 213 aaPredicted RBP10.29□□□□□ -0.76
SMC5-202ENST00000471372 EML1O00423 815 aa10.28□□□□□ -0.76
SMC5-202ENST00000471372 SORBS3O60504 671 aa10.28□□□□□ -0.76
SMC5-202ENST00000471372 BRD2P25440 801 aaKnown RBP10.28□□□□□ -0.76
SMC5-202ENST00000471372 FGD1P98174 961 aa10.28□□□□□ -0.76
SMC5-202ENST00000471372 NR5A1Q13285 461 aa10.28□□□□□ -0.76
SMC5-202ENST00000471372 METTL16Q86W50 562 aaKnown RBP10.28□□□□□ -0.76
SMC5-202ENST00000471372 ETFBKMTQ8IXQ9 262 aa10.28□□□□□ -0.76
SMC5-202ENST00000471372 PIK3R5Q8WYR1 880 aa10.28□□□□□ -0.76
SMC5-202ENST00000471372 CNKSR1Q969H4 720 aa10.28□□□□□ -0.76
SMC5-202ENST00000471372 PDZRN3Q9UPQ7 1066 aa10.28□□□□□ -0.76
SMC5-202ENST00000471372 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
SMC5-202ENST00000471372 DNM1Q05193 864 aaKnown RBP10.27□□□□□ -0.77
SMC5-202ENST00000471372 PSMD2Q13200 908 aa10.27□□□□□ -0.77
SMC5-202ENST00000471372 ENOX2Q16206 610 aaKnown RBP10.27□□□□□ -0.77
SMC5-202ENST00000471372 NT5DC4Q86YG4 428 aa10.27□□□□□ -0.77
SMC5-202ENST00000471372 GJD3Q8N144 294 aa10.27□□□□□ -0.77
SMC5-202ENST00000471372 ZDHHC1Q8WTX9 485 aa10.27□□□□□ -0.77
SMC5-202ENST00000471372 VTI1BQ9UEU0 232 aa10.27□□□□□ -0.77
SMC5-202ENST00000471372 HCN4Q9Y3Q4 1203 aa10.27□□□□□ -0.77
SMC5-202ENST00000471372 HRH3Q9Y5N1 445 aa10.27□□□□□ -0.77
SMC5-202ENST00000471372 PNMA6FA0A0J9YX94 578 aa10.26□□□□□ -0.77
SMC5-202ENST00000471372 ATP2B2Q01814 1243 aa10.26□□□□□ -0.77
SMC5-202ENST00000471372 DGKZQ13574 1117 aa10.26□□□□□ -0.77
SMC5-202ENST00000471372 SF3A1Q15459 793 aaKnown RBP10.26□□□□□ -0.77
SMC5-202ENST00000471372 UBXN4Q92575 508 aa10.26□□□□□ -0.77
SMC5-202ENST00000471372 EDEM1Q92611 657 aa10.26□□□□□ -0.77
SMC5-202ENST00000471372 ESYT1Q9BSJ8 1104 aa10.26□□□□□ -0.77
SMC5-202ENST00000471372 SERTM1A2A2V5 107 aa10.25□□□□□ -0.77
SMC5-202ENST00000471372 CD2BP2O95400 341 aaKnown RBP10.25□□□□□ -0.77
SMC5-202ENST00000471372 FANCCQ00597 558 aa10.25□□□□□ -0.77
SMC5-202ENST00000471372 ALDH16A1Q8IZ83 802 aa10.25□□□□□ -0.77
SMC5-202ENST00000471372 KDF1Q8NAX2 398 aaPredicted RBP10.25□□□□□ -0.77
SMC5-202ENST00000471372 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
SMC5-202ENST00000471372 KLK14Q9P0G3 267 aa10.25□□□□□ -0.77
SMC5-202ENST00000471372 ZNF232Q9UNY5 417 aa10.25□□□□□ -0.77
SMC5-202ENST00000471372 PDGFAP04085 211 aa10.24□□□□□ -0.77
SMC5-202ENST00000471372 MZF1P28698 734 aaPredicted RBP10.24□□□□□ -0.77
SMC5-202ENST00000471372 NOS2P35228 1153 aa10.24□□□□□ -0.77
SMC5-202ENST00000471372 HIRAP54198 1017 aaPredicted RBP10.24□□□□□ -0.77
SMC5-202ENST00000471372 TEAD4Q15561 434 aa10.24□□□□□ -0.77
SMC5-202ENST00000471372 ZNF295-AS1Q8N0V1 137 aa10.24□□□□□ -0.77
SMC5-202ENST00000471372 EMILIN1Q9Y6C2 1016 aa10.24□□□□□ -0.77
SMC5-202ENST00000471372 PARP3Q9Y6F1 533 aa10.24□□□□□ -0.77
SMC5-202ENST00000471372 ADH1AP07327 375 aa10.23□□□□□ -0.77
SMC5-202ENST00000471372 ZAP70P43403 619 aa10.23□□□□□ -0.77
SMC5-202ENST00000471372 RTN1Q16799 776 aa10.23□□□□□ -0.77
SMC5-202ENST00000471372 C11orf91Q3C1V1 193 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms