RNA–Protein interactions for RNA: ENST00000470880.6

CHL1-211, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 3

Gene CHL1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-211ENST00000470880 BARGINQ6ZT62 677 aa8.67□□□□□ -1.02
CHL1-211ENST00000470880 NBPF4Q96M43 638 aa8.67□□□□□ -1.02
CHL1-211ENST00000470880 PNNQ9H307 717 aaKnown RBP8.67□□□□□ -1.02
CHL1-211ENST00000470880 ANO8Q9HCE9 1232 aaPredicted RBP8.67□□□□□ -1.02
CHL1-211ENST00000470880 MAPK8IP3Q9UPT6 1336 aa8.67□□□□□ -1.02
CHL1-211ENST00000470880 GTF3C3Q9Y5Q9 886 aa8.67□□□□□ -1.02
CHL1-211ENST00000470880 COL18A1P39060 1754 aa8.66□□□□□ -1.02
CHL1-211ENST00000470880 CICQ96RK0 1608 aaPredicted RBP8.66□□□□□ -1.02
CHL1-211ENST00000470880 IGSF1Q8N6C5 1336 aa8.66□□□□□ -1.02
CHL1-211ENST00000470880 EXOC5O00471 708 aa8.66□□□□□ -1.02
CHL1-211ENST00000470880 HMOX1P09601 288 aa8.66□□□□□ -1.02
CHL1-211ENST00000470880 IL13P35225 146 aa8.66□□□□□ -1.02
CHL1-211ENST00000470880 PHF12Q96QT6 1004 aa8.66□□□□□ -1.02
CHL1-211ENST00000470880 EYA1Q99502 592 aa8.66□□□□□ -1.02
CHL1-211ENST00000470880 SPG7Q9UQ90 795 aa8.66□□□□□ -1.02
CHL1-211ENST00000470880 MAP2P11137 1827 aaKnown RBP8.66□□□□□ -1.02
CHL1-211ENST00000470880 CLCN6P51797 869 aa8.65□□□□□ -1.02
CHL1-211ENST00000470880 NMRK2Q9NPI5 230 aa8.65□□□□□ -1.02
CHL1-211ENST00000470880 PCDH11XQ9BZA7 1347 aa8.64□□□□□ -1.03
CHL1-211ENST00000470880 PCDH11YQ9BZA8 1340 aa8.64□□□□□ -1.03
CHL1-211ENST00000470880 PYGBP11216 843 aa8.64□□□□□ -1.03
CHL1-211ENST00000470880 PLEKHO1Q53GL0 409 aaPredicted RBP8.64□□□□□ -1.03
CHL1-211ENST00000470880 C1orf141Q5JVX7 400 aa8.64□□□□□ -1.03
CHL1-211ENST00000470880 NLGN2Q8NFZ4 835 aa8.64□□□□□ -1.03
CHL1-211ENST00000470880 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
CHL1-211ENST00000470880 COL3A1P02461 1466 aaPredicted RBP8.64□□□□□ -1.03
CHL1-211ENST00000470880 RGPD5Q99666 1765 aa8.63□□□□□ -1.03
CHL1-211ENST00000470880 AMOTQ4VCS5 1084 aa8.63□□□□□ -1.03
CHL1-211ENST00000470880 AEBP1Q8IUX7 1158 aa8.63□□□□□ -1.03
CHL1-211ENST00000470880 C16orf71Q8IYS4 520 aaPredicted RBP8.63□□□□□ -1.03
CHL1-211ENST00000470880 ZCRB1Q8TBF4 217 aaKnown RBP8.63□□□□□ -1.03
CHL1-211ENST00000470880 PARP4Q9UKK3 1724 aaKnown RBP8.63□□□□□ -1.03
CHL1-211ENST00000470880 OVOS2A0A0G2JMS6 1433 aa8.63□□□□□ -1.03
CHL1-211ENST00000470880 HSPA8P11142 646 aaKnown RBP8.62□□□□□ -1.03
CHL1-211ENST00000470880 PRKAR2BP31323 418 aa8.62□□□□□ -1.03
CHL1-211ENST00000470880 SOX10P56693 466 aa8.62□□□□□ -1.03
CHL1-211ENST00000470880 ZNF530Q6P9A1 599 aaPredicted RBP8.62□□□□□ -1.03
CHL1-211ENST00000470880 GAS2L2Q8NHY3 880 aa8.62□□□□□ -1.03
CHL1-211ENST00000470880 MTFR1LQ9H019 292 aa8.62□□□□□ -1.03
CHL1-211ENST00000470880 CACNA1GO43497 2377 aa8.62□□□□□ -1.03
CHL1-211ENST00000470880 PLEKHG2Q9H7P9 1386 aa8.61□□□□□ -1.03
CHL1-211ENST00000470880 FCHSD2O94868 740 aa8.61□□□□□ -1.03
CHL1-211ENST00000470880 HSP90AB1P08238 724 aaKnown RBP8.61□□□□□ -1.03
CHL1-211ENST00000470880 IFNL2Q8IZJ0 200 aa8.61□□□□□ -1.03
CHL1-211ENST00000470880 FAM9BQ8IZU0 186 aa8.61□□□□□ -1.03
CHL1-211ENST00000470880 SYTL4Q96C24 671 aaPredicted RBP8.61□□□□□ -1.03
CHL1-211ENST00000470880 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
CHL1-211ENST00000470880 THSD7AQ9UPZ6 1657 aa8.61□□□□□ -1.03
CHL1-211ENST00000470880 LRRC37A3O60309 1634 aa8.61□□□□□ -1.03
CHL1-211ENST00000470880 KDRP35968 1356 aa8.61□□□□□ -1.03
CHL1-211ENST00000470880 CCER2I3L3R5 266 aa8.6□□□□□ -1.03
CHL1-211ENST00000470880 FAM196AQ6ZSG2 479 aa8.6□□□□□ -1.03
CHL1-211ENST00000470880 RTF1Q92541 710 aaKnown RBP8.6□□□□□ -1.03
CHL1-211ENST00000470880 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHL1-211ENST00000470880 WNK3Q9BYP7 1800 aa8.59□□□□□ -1.03
CHL1-211ENST00000470880 GABBR2O75899 941 aa8.59□□□□□ -1.03
CHL1-211ENST00000470880 TMEM132AQ24JP5 1023 aa8.59□□□□□ -1.03
CHL1-211ENST00000470880 CCDC146Q8IYE0 955 aa8.59□□□□□ -1.03
CHL1-211ENST00000470880 RSPH6AQ9H0K4 717 aa8.59□□□□□ -1.03
CHL1-211ENST00000470880 NCAPD2Q15021 1401 aa8.59□□□□□ -1.03
CHL1-211ENST00000470880 LMOD3Q0VAK6 560 aa8.58□□□□□ -1.04
CHL1-211ENST00000470880 AKAP4Q5JQC9 854 aa8.58□□□□□ -1.04
CHL1-211ENST00000470880 RUNDC1Q96C34 613 aa8.58□□□□□ -1.04
CHL1-211ENST00000470880 KIF12Q96FN5 646 aa8.58□□□□□ -1.04
CHL1-211ENST00000470880 MKRN1Q9UHC7 482 aaKnown RBP8.58□□□□□ -1.04
CHL1-211ENST00000470880 PCDHB13Q9Y5F0 798 aa8.58□□□□□ -1.04
CHL1-211ENST00000470880 RGPD2P0DJD1 1756 aa8.58□□□□□ -1.04
CHL1-211ENST00000470880 MAP3K13O43283 966 aa8.57□□□□□ -1.04
CHL1-211ENST00000470880 PHKG2P15735 406 aa8.57□□□□□ -1.04
CHL1-211ENST00000470880 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
CHL1-211ENST00000470880 MTHFSDQ2M296 383 aaKnown RBP8.57□□□□□ -1.04
CHL1-211ENST00000470880 MARCH10Q8NA82 808 aaPredicted RBP8.57□□□□□ -1.04
CHL1-211ENST00000470880 KCNV2Q8TDN2 545 aa8.57□□□□□ -1.04
CHL1-211ENST00000470880 ACSBG1Q96GR2 724 aa8.57□□□□□ -1.04
CHL1-211ENST00000470880 ADAMTS8Q9UP79 889 aa8.57□□□□□ -1.04
CHL1-211ENST00000470880 BAHCC1Q9P281 2608 aa8.57□□□□□ -1.04
CHL1-211ENST00000470880 UNC80Q8N2C7 3258 aa8.56□□□□□ -1.04
CHL1-211ENST00000470880 GNAT3A8MTJ3 354 aa8.56□□□□□ -1.04
CHL1-211ENST00000470880 TEFQ10587 303 aa8.56□□□□□ -1.04
CHL1-211ENST00000470880 CCDC184Q52MB2 194 aa8.56□□□□□ -1.04
CHL1-211ENST00000470880 DCAF5Q96JK2 942 aa8.56□□□□□ -1.04
CHL1-211ENST00000470880 MCOLN1Q9GZU1 580 aa8.56□□□□□ -1.04
CHL1-211ENST00000470880 TMOD3Q9NYL9 352 aa8.56□□□□□ -1.04
CHL1-211ENST00000470880 CYP27B1O15528 508 aa8.55□□□□□ -1.04
CHL1-211ENST00000470880 RIPK4P57078 832 aa8.55□□□□□ -1.04
CHL1-211ENST00000470880 CABP4P57796 275 aa8.55□□□□□ -1.04
CHL1-211ENST00000470880 NFE2L2Q16236 605 aa8.55□□□□□ -1.04
CHL1-211ENST00000470880 MPRIPQ6WCQ1 1025 aa8.55□□□□□ -1.04
CHL1-211ENST00000470880 PNISRQ8TF01 805 aaKnown RBP8.55□□□□□ -1.04
CHL1-211ENST00000470880 MS4A3Q96HJ5 214 aa8.55□□□□□ -1.04
CHL1-211ENST00000470880 WDR70Q9NW82 654 aa8.55□□□□□ -1.04
CHL1-211ENST00000470880 PKD1L3Q7Z443 1732 aa8.54□□□□□ -1.04
CHL1-211ENST00000470880 PPEF1O14829 653 aaPredicted RBP8.54□□□□□ -1.04
CHL1-211ENST00000470880 GALR2O43603 387 aaPredicted RBP8.54□□□□□ -1.04
CHL1-211ENST00000470880 ERICH6Q7L0X2 663 aa8.54□□□□□ -1.04
CHL1-211ENST00000470880 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.54□□□□□ -1.04
CHL1-211ENST00000470880 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
CHL1-211ENST00000470880 PHACTR3Q96KR7 559 aa8.54□□□□□ -1.04
CHL1-211ENST00000470880 RRP7AQ9Y3A4 280 aaKnown RBP8.54□□□□□ -1.04
CHL1-211ENST00000470880 PRIM1P49642 420 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms