RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
LSM2-210ENST00000470086 SRP68Q9UHB9 627 aaKnown RBP11.75□□□□□ -0.53
LSM2-210ENST00000470086 CGNL1Q0VF96 1302 aa11.75□□□□□ -0.53
LSM2-210ENST00000470086 ATP6V1AP38606 617 aa11.74□□□□□ -0.53
LSM2-210ENST00000470086 ATG3Q9NT62 314 aa11.74□□□□□ -0.53
LSM2-210ENST00000470086 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
LSM2-210ENST00000470086 INSRP06213 1382 aa11.74□□□□□ -0.53
LSM2-210ENST00000470086 CNTNAP1P78357 1384 aa11.74□□□□□ -0.53
LSM2-210ENST00000470086 HDGFL2Q7Z4V5 671 aaPredicted RBP11.73□□□□□ -0.53
LSM2-210ENST00000470086 UBR2Q8IWV8 1755 aa11.73□□□□□ -0.53
LSM2-210ENST00000470086 SMARCC1Q92922 1105 aaPredicted RBP11.73□□□□□ -0.53
LSM2-210ENST00000470086 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
LSM2-210ENST00000470086 NFKBIEO00221 500 aa11.72□□□□□ -0.53
LSM2-210ENST00000470086 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
LSM2-210ENST00000470086 NKX1-1Q15270 411 aaPredicted RBP11.72□□□□□ -0.53
LSM2-210ENST00000470086 TRPM7Q96QT4 1865 aa11.72□□□□□ -0.53
LSM2-210ENST00000470086 BCORQ6W2J9 1755 aa11.72□□□□□ -0.53
LSM2-210ENST00000470086 FLT4P35916 1363 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 CASP8AP2Q9UKL3 1982 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 GLTPD2A6NH11 291 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 C19orf67A6NJJ6 358 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 HAX1O00165 279 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 TMF1P82094 1093 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 DALRD3Q5D0E6 543 aaKnown RBP11.71□□□□□ -0.53
LSM2-210ENST00000470086 ABHD8Q96I13 439 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 COG3Q96JB2 828 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 SIN3AQ96ST3 1273 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 GGNBP2Q9H3C7 697 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 PIM2Q9P1W9 311 aa11.71□□□□□ -0.53
LSM2-210ENST00000470086 CNTNAP4Q9C0A0 1308 aa11.7□□□□□ -0.54
LSM2-210ENST00000470086 LBX1P52954 281 aa11.7□□□□□ -0.54
LSM2-210ENST00000470086 EMILIN1Q9Y6C2 1016 aa11.7□□□□□ -0.54
LSM2-210ENST00000470086 USP42Q9H9J4 1324 aaKnown RBP11.69□□□□□ -0.54
LSM2-210ENST00000470086 POLRMTO00411 1230 aaKnown RBP11.69□□□□□ -0.54
LSM2-210ENST00000470086 HSPA8P11142 646 aaKnown RBP11.69□□□□□ -0.54
LSM2-210ENST00000470086 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
LSM2-210ENST00000470086 TMOD3Q9NYL9 352 aa11.69□□□□□ -0.54
LSM2-210ENST00000470086 RTCBQ9Y3I0 505 aaKnown RBP11.69□□□□□ -0.54
LSM2-210ENST00000470086 PARP3Q9Y6F1 533 aa11.69□□□□□ -0.54
LSM2-210ENST00000470086 PASKQ96RG2 1323 aa11.68□□□□□ -0.54
LSM2-210ENST00000470086 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
LSM2-210ENST00000470086 VEGFAP15692 232 aaPredicted RBP11.68□□□□□ -0.54
LSM2-210ENST00000470086 PHKG2P15735 406 aa11.68□□□□□ -0.54
LSM2-210ENST00000470086 NLGN1Q8N2Q7 840 aa11.68□□□□□ -0.54
LSM2-210ENST00000470086 FYB1O15117 783 aa11.67□□□□□ -0.54
LSM2-210ENST00000470086 VEGFBP49765 207 aa11.67□□□□□ -0.54
LSM2-210ENST00000470086 TRAPPC3LQ5T215 181 aa11.67□□□□□ -0.54
LSM2-210ENST00000470086 TERF2IPQ9NYB0 399 aa11.67□□□□□ -0.54
LSM2-210ENST00000470086 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
LSM2-210ENST00000470086 TONSLQ96HA7 1378 aa11.67□□□□□ -0.54
LSM2-210ENST00000470086 PDE4DIPQ5VU43 2346 aa11.66□□□□□ -0.54
LSM2-210ENST00000470086 LMNB1P20700 586 aa11.66□□□□□ -0.54
LSM2-210ENST00000470086 TESK2Q96S53 571 aa11.66□□□□□ -0.54
LSM2-210ENST00000470086 RPS6KA4O75676 772 aa11.65□□□□□ -0.54
LSM2-210ENST00000470086 WBP1LQ9NX94 342 aa11.65□□□□□ -0.54
LSM2-210ENST00000470086 COL4A5P29400 1685 aa11.65□□□□□ -0.55
LSM2-210ENST00000470086 SIPA1L3O60292 1781 aaPredicted RBP11.64□□□□□ -0.55
LSM2-210ENST00000470086 RFC4P35249 363 aa11.64□□□□□ -0.55
LSM2-210ENST00000470086 CTCFP49711 727 aaPredicted RBP11.64□□□□□ -0.55
LSM2-210ENST00000470086 MIER1Q8N108 512 aa11.64□□□□□ -0.55
LSM2-210ENST00000470086 TM4SF1P30408 202 aa11.63□□□□□ -0.55
LSM2-210ENST00000470086 CRKLP46109 303 aaKnown RBP11.63□□□□□ -0.55
LSM2-210ENST00000470086 EVX2Q03828 476 aa11.63□□□□□ -0.55
LSM2-210ENST00000470086 RC3H1Q5TC82 1133 aaKnown RBP11.62□□□□□ -0.55
LSM2-210ENST00000470086 EYA1Q99502 592 aa11.62□□□□□ -0.55
LSM2-210ENST00000470086 BCL2L12Q9HB09 334 aa11.62□□□□□ -0.55
LSM2-210ENST00000470086 KIF24Q5T7B8 1368 aa11.62□□□□□ -0.55
LSM2-210ENST00000470086 MRC1P22897 1456 aa11.62□□□□□ -0.55
LSM2-210ENST00000470086 DDNO94850 711 aaPredicted RBP11.61□□□□□ -0.55
LSM2-210ENST00000470086 RGS19P49795 217 aa11.61□□□□□ -0.55
LSM2-210ENST00000470086 MLLT1Q03111 559 aaPredicted RBP11.61□□□□□ -0.55
LSM2-210ENST00000470086 SP7Q8TDD2 431 aaPredicted RBP11.61□□□□□ -0.55
LSM2-210ENST00000470086 CARD11Q9BXL7 1154 aa11.61□□□□□ -0.55
LSM2-210ENST00000470086 CCDC85CA6NKD9 419 aa11.6□□□□□ -0.55
LSM2-210ENST00000470086 ITGBL1O95965 494 aaPredicted RBP11.6□□□□□ -0.55
LSM2-210ENST00000470086 FMR1Q06787 632 aaKnown RBP eCLIP11.6□□□□□ -0.55
LSM2-210ENST00000470086 USPL1Q5W0Q7 1092 aa11.6□□□□□ -0.55
LSM2-210ENST00000470086 INTS5Q6P9B9 1019 aaKnown RBP11.6□□□□□ -0.55
LSM2-210ENST00000470086 TSKSQ9UJT2 592 aa11.6□□□□□ -0.55
LSM2-210ENST00000470086 COL15A1P39059 1388 aa11.59□□□□□ -0.55
LSM2-210ENST00000470086 PTCD1O75127 700 aaKnown RBP11.59□□□□□ -0.55
LSM2-210ENST00000470086 NFIXQ14938 502 aa11.59□□□□□ -0.55
LSM2-210ENST00000470086 IFNL2Q8IZJ0 200 aa11.59□□□□□ -0.55
LSM2-210ENST00000470086 PLCD3Q8N3E9 789 aa11.59□□□□□ -0.55
LSM2-210ENST00000470086 SPG7Q9UQ90 795 aa11.59□□□□□ -0.55
LSM2-210ENST00000470086 SOS1Q07889 1333 aaPredicted RBP11.59□□□□□ -0.55
LSM2-210ENST00000470086 ZNF541Q9H0D2 1346 aa11.59□□□□□ -0.55
LSM2-210ENST00000470086 CCDC24Q8N4L8 307 aa11.58□□□□□ -0.56
LSM2-210ENST00000470086 MKI67P46013 3256 aaKnown RBP11.58□□□□□ -0.56
LSM2-210ENST00000470086 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
LSM2-210ENST00000470086 VASPP50552 380 aaPredicted RBP11.57□□□□□ -0.56
LSM2-210ENST00000470086 NEUROD1Q13562 356 aa11.57□□□□□ -0.56
LSM2-210ENST00000470086 AIDAQ96BJ3 306 aa11.57□□□□□ -0.56
LSM2-210ENST00000470086 RASSF10A6NK89 507 aa11.56□□□□□ -0.56
LSM2-210ENST00000470086 C21orf2O43822 256 aa11.56□□□□□ -0.56
LSM2-210ENST00000470086 C2CD5Q86YS7 1000 aa11.56□□□□□ -0.56
LSM2-210ENST00000470086 CARD14Q9BXL6 1004 aa11.56□□□□□ -0.56
LSM2-210ENST00000470086 BRCA2P51587 3418 aa11.55□□□□□ -0.56
LSM2-210ENST00000470086 SNED1Q8TER0 1413 aa11.55□□□□□ -0.56
LSM2-210ENST00000470086 ST20-MTHFSA0A0A6YYL1 179 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms