RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 C10orf71Q711Q0 1435 aa18.7■□□□□ 0.58
COMMD3-208ENST00000470045 MCM10Q7L590 875 aa18.7■□□□□ 0.58
COMMD3-208ENST00000470045 RTF1Q92541 710 aaKnown RBP18.7■□□□□ 0.58
COMMD3-208ENST00000470045 ZBTB1Q9Y2K1 713 aa18.7■□□□□ 0.58
COMMD3-208ENST00000470045 SCN7AQ01118 1682 aa18.69■□□□□ 0.58
COMMD3-208ENST00000470045 COL15A1P39059 1388 aa18.69■□□□□ 0.58
COMMD3-208ENST00000470045 YY1P25490 414 aa18.69■□□□□ 0.58
COMMD3-208ENST00000470045 SRP68Q9UHB9 627 aaKnown RBP18.69■□□□□ 0.58
COMMD3-208ENST00000470045 BTBD11A6QL63 1104 aa18.68■□□□□ 0.58
COMMD3-208ENST00000470045 FMNL2Q96PY5 1086 aa18.68■□□□□ 0.58
COMMD3-208ENST00000470045 LAMB4A4D0S4 1761 aa18.68■□□□□ 0.58
COMMD3-208ENST00000470045 BRCA1P38398 1863 aaKnown RBP18.67■□□□□ 0.58
COMMD3-208ENST00000470045 UTRNP46939 3433 aa18.67■□□□□ 0.58
COMMD3-208ENST00000470045 NRXN2Q9P2S2 1712 aa18.67■□□□□ 0.58
COMMD3-208ENST00000470045 KCNQ3O43525 872 aa18.67■□□□□ 0.58
COMMD3-208ENST00000470045 NEFMP07197 916 aa18.67■□□□□ 0.58
COMMD3-208ENST00000470045 DCTN1Q14203 1278 aa18.67■□□□□ 0.58
COMMD3-208ENST00000470045 GPR162Q16538 588 aa18.67■□□□□ 0.58
COMMD3-208ENST00000470045 TEX13AQ9BXU3 409 aaPredicted RBP18.67■□□□□ 0.58
COMMD3-208ENST00000470045 N4BP2Q86UW6 1770 aaPredicted RBP18.67■□□□□ 0.58
COMMD3-208ENST00000470045 PXDNLA1KZ92 1463 aa18.66■□□□□ 0.58
COMMD3-208ENST00000470045 STARD3NLO95772 234 aa18.66■□□□□ 0.58
COMMD3-208ENST00000470045 YBX3P16989 372 aaKnown RBP eCLIP18.66■□□□□ 0.58
COMMD3-208ENST00000470045 NFE2L2Q16236 605 aa18.66■□□□□ 0.58
COMMD3-208ENST00000470045 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
COMMD3-208ENST00000470045 GOLGB1Q14789 3259 aaKnown RBP18.66■□□□□ 0.58
COMMD3-208ENST00000470045 BCORQ6W2J9 1755 aa18.65■□□□□ 0.58
COMMD3-208ENST00000470045 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
COMMD3-208ENST00000470045 FKBP8Q14318 412 aa18.65■□□□□ 0.58
COMMD3-208ENST00000470045 PRKRIP1Q9H875 184 aaPredicted RBP18.65■□□□□ 0.58
COMMD3-208ENST00000470045 NARFQ9UHQ1 456 aa18.65■□□□□ 0.58
COMMD3-208ENST00000470045 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.57
COMMD3-208ENST00000470045 MAPK8IP3Q9UPT6 1336 aa18.64■□□□□ 0.57
COMMD3-208ENST00000470045 DDR1Q08345 913 aa18.63■□□□□ 0.57
COMMD3-208ENST00000470045 USPL1Q5W0Q7 1092 aa18.63■□□□□ 0.57
COMMD3-208ENST00000470045 PARP3Q9Y6F1 533 aa18.63■□□□□ 0.57
COMMD3-208ENST00000470045 ZPR1O75312 459 aa18.62■□□□□ 0.57
COMMD3-208ENST00000470045 CANXP27824 592 aaKnown RBP18.62■□□□□ 0.57
COMMD3-208ENST00000470045 TM4SF1P30408 202 aa18.62■□□□□ 0.57
COMMD3-208ENST00000470045 TAF7Q15545 349 aaPredicted RBP18.62■□□□□ 0.57
COMMD3-208ENST00000470045 PELP1Q8IZL8 1130 aaKnown RBP18.62■□□□□ 0.57
COMMD3-208ENST00000470045 BCL2L12Q9HB09 334 aa18.62■□□□□ 0.57
COMMD3-208ENST00000470045 GRIN3BO60391 1043 aa18.61■□□□□ 0.57
COMMD3-208ENST00000470045 IL6STP40189 918 aaPredicted RBP18.61■□□□□ 0.57
COMMD3-208ENST00000470045 POLRMTO00411 1230 aaKnown RBP18.6■□□□□ 0.57
COMMD3-208ENST00000470045 TGFB2P61812 414 aa18.6■□□□□ 0.57
COMMD3-208ENST00000470045 ARFGEF1Q9Y6D6 1849 aa18.59■□□□□ 0.57
COMMD3-208ENST00000470045 A0A087WZG4 1122 aa18.59■□□□□ 0.57
COMMD3-208ENST00000470045 PRAMEF22A3QJZ6 481 aa18.59■□□□□ 0.57
COMMD3-208ENST00000470045 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
COMMD3-208ENST00000470045 PNISRQ8TF01 805 aaKnown RBP18.59■□□□□ 0.57
COMMD3-208ENST00000470045 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
COMMD3-208ENST00000470045 DLEC1Q9Y238 1755 aa18.59■□□□□ 0.57
COMMD3-208ENST00000470045 A1BGP04217 495 aa18.58■□□□□ 0.56
COMMD3-208ENST00000470045 NFIXQ14938 502 aa18.58■□□□□ 0.56
COMMD3-208ENST00000470045 THUMPD2Q9BTF0 503 aaKnown RBP18.58■□□□□ 0.56
COMMD3-208ENST00000470045 TMPOP42166 694 aaKnown RBP18.56■□□□□ 0.56
COMMD3-208ENST00000470045 MIS18AQ9NYP9 233 aa18.56■□□□□ 0.56
COMMD3-208ENST00000470045 ANKRD31Q8N7Z5 1873 aa18.55■□□□□ 0.56
COMMD3-208ENST00000470045 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
COMMD3-208ENST00000470045 A0A0G2JLW4 131 aa18.54■□□□□ 0.56
COMMD3-208ENST00000470045 DPEP1P16444 411 aa18.54■□□□□ 0.56
COMMD3-208ENST00000470045 KCNA3P22001 575 aa18.54■□□□□ 0.56
COMMD3-208ENST00000470045 RIPK4P57078 832 aa18.54■□□□□ 0.56
COMMD3-208ENST00000470045 EIF4A1P60842 406 aaKnown RBP18.54■□□□□ 0.56
COMMD3-208ENST00000470045 ZNF784Q8NCA9 323 aaPredicted RBP18.54■□□□□ 0.56
COMMD3-208ENST00000470045 CAMTA2O94983 1202 aa18.53■□□□□ 0.56
COMMD3-208ENST00000470045 LMOD3Q0VAK6 560 aa18.53■□□□□ 0.56
COMMD3-208ENST00000470045 RUNDC1Q96C34 613 aa18.53■□□□□ 0.56
COMMD3-208ENST00000470045 ADAMTS8Q9UP79 889 aa18.53■□□□□ 0.56
COMMD3-208ENST00000470045 TBC1D2BQ9UPU7 963 aa18.53■□□□□ 0.56
COMMD3-208ENST00000470045 NBPF26B4DH59 902 aa18.52■□□□□ 0.56
COMMD3-208ENST00000470045 GIGYF1O75420 1035 aaPredicted RBP18.52■□□□□ 0.56
COMMD3-208ENST00000470045 NBPF10Q6P3W6 841 aaKnown RBP18.52■□□□□ 0.56
COMMD3-208ENST00000470045 CCDC146Q8IYE0 955 aa18.52■□□□□ 0.56
COMMD3-208ENST00000470045 NBPF15Q8N660 670 aa18.52■□□□□ 0.56
COMMD3-208ENST00000470045 WWC3Q9ULE0 1092 aa18.52■□□□□ 0.56
COMMD3-208ENST00000470045 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.56
COMMD3-208ENST00000470045 ADCY9O60503 1353 aa18.52■□□□□ 0.55
COMMD3-208ENST00000470045 ZNF316A6NFI3 1004 aaPredicted RBP18.51■□□□□ 0.55
COMMD3-208ENST00000470045 SERPINB2P05120 415 aa18.51■□□□□ 0.55
COMMD3-208ENST00000470045 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
COMMD3-208ENST00000470045 TBC1D9BQ66K14 1250 aa18.51■□□□□ 0.55
COMMD3-208ENST00000470045 DZIP3Q86Y13 1208 aaKnown RBP18.51■□□□□ 0.55
COMMD3-208ENST00000470045 BABAM1Q9NWV8 329 aa18.51■□□□□ 0.55
COMMD3-208ENST00000470045 CARMIL3Q8ND23 1372 aa18.51■□□□□ 0.55
COMMD3-208ENST00000470045 COL11A2P13942 1736 aaPredicted RBP18.5■□□□□ 0.55
COMMD3-208ENST00000470045 RGL2O15211 777 aa18.5■□□□□ 0.55
COMMD3-208ENST00000470045 NPM2Q86SE8 214 aaKnown RBP18.49■□□□□ 0.55
COMMD3-208ENST00000470045 TRIM35Q9UPQ4 493 aa18.49■□□□□ 0.55
COMMD3-208ENST00000470045 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
COMMD3-208ENST00000470045 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
COMMD3-208ENST00000470045 TSPYL4Q9UJ04 414 aa18.48■□□□□ 0.55
COMMD3-208ENST00000470045 BCS1LQ9Y276 419 aa18.48■□□□□ 0.55
COMMD3-208ENST00000470045 NUP98P52948 1817 aa18.48■□□□□ 0.55
COMMD3-208ENST00000470045 CHRNA5P30532 468 aa18.47■□□□□ 0.55
COMMD3-208ENST00000470045 BICDL1Q6ZP65 573 aa18.47■□□□□ 0.55
COMMD3-208ENST00000470045 PIM2Q9P1W9 311 aa18.47■□□□□ 0.55
COMMD3-208ENST00000470045 ERBB4Q15303 1308 aa18.46■□□□□ 0.55
COMMD3-208ENST00000470045 DSG3P32926 999 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms