RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 AKAP4Q5JQC9 854 aa11□□□□□ -0.65
GAPVD1-213ENST00000469498 MCM10Q7L590 875 aa11□□□□□ -0.65
GAPVD1-213ENST00000469498 IFNL2Q8IZJ0 200 aa11□□□□□ -0.65
GAPVD1-213ENST00000469498 MPRIPQ6WCQ1 1025 aa10.99□□□□□ -0.65
GAPVD1-213ENST00000469498 WWC1Q8IX03 1113 aa10.99□□□□□ -0.65
GAPVD1-213ENST00000469498 SEPT12Q8IYM1 358 aa10.99□□□□□ -0.65
GAPVD1-213ENST00000469498 RTF1Q92541 710 aaKnown RBP10.99□□□□□ -0.65
GAPVD1-213ENST00000469498 PCDHB8Q9UN66 801 aa10.99□□□□□ -0.65
GAPVD1-213ENST00000469498 RXRBP28702 533 aa10.98□□□□□ -0.65
GAPVD1-213ENST00000469498 CCDC27Q2M243 656 aa10.98□□□□□ -0.65
GAPVD1-213ENST00000469498 TMEM106CQ9BVX2 250 aa10.98□□□□□ -0.65
GAPVD1-213ENST00000469498 ZNF521Q96K83 1311 aa10.98□□□□□ -0.65
GAPVD1-213ENST00000469498 LY75O60449 1722 aa10.98□□□□□ -0.65
GAPVD1-213ENST00000469498 TAF1LQ8IZX4 1826 aa10.98□□□□□ -0.65
GAPVD1-213ENST00000469498 CACNA1FO60840 1977 aa10.97□□□□□ -0.65
GAPVD1-213ENST00000469498 RNMTO43148 476 aaKnown RBP10.97□□□□□ -0.65
GAPVD1-213ENST00000469498 EMP3P54852 163 aa10.97□□□□□ -0.65
GAPVD1-213ENST00000469498 NGEFQ8N5V2 710 aa10.97□□□□□ -0.65
GAPVD1-213ENST00000469498 MARCH10Q8NA82 808 aaPredicted RBP10.97□□□□□ -0.65
GAPVD1-213ENST00000469498 IL17REQ8NFR9 667 aa10.97□□□□□ -0.65
GAPVD1-213ENST00000469498 LGR6Q9HBX8 967 aa10.97□□□□□ -0.65
GAPVD1-213ENST00000469498 CEMIPQ8WUJ3 1361 aa10.97□□□□□ -0.65
GAPVD1-213ENST00000469498 TJP1Q07157 1748 aa10.97□□□□□ -0.65
GAPVD1-213ENST00000469498 HTATSF1O43719 755 aaKnown RBP10.96□□□□□ -0.65
GAPVD1-213ENST00000469498 ONECUT3O60422 494 aaPredicted RBP10.96□□□□□ -0.65
GAPVD1-213ENST00000469498 HSP90AB1P08238 724 aaKnown RBP10.96□□□□□ -0.65
GAPVD1-213ENST00000469498 PDE3BQ13370 1112 aa10.96□□□□□ -0.65
GAPVD1-213ENST00000469498 FAM182BQ5T319 152 aa10.96□□□□□ -0.65
GAPVD1-213ENST00000469498 ZNF467Q7Z7K2 595 aaPredicted RBP10.96□□□□□ -0.65
GAPVD1-213ENST00000469498 LAS1LQ9Y4W2 734 aaKnown RBP10.96□□□□□ -0.65
GAPVD1-213ENST00000469498 IRX5P78411 483 aaPredicted RBP10.95□□□□□ -0.66
GAPVD1-213ENST00000469498 TEFQ10587 303 aa10.95□□□□□ -0.66
GAPVD1-213ENST00000469498 IFNL1Q8IU54 200 aa10.95□□□□□ -0.66
GAPVD1-213ENST00000469498 HS6ST3Q8IZP7 471 aa10.95□□□□□ -0.66
GAPVD1-213ENST00000469498 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
GAPVD1-213ENST00000469498 DCAF5Q96JK2 942 aa10.95□□□□□ -0.66
GAPVD1-213ENST00000469498 COL5A3P25940 1745 aaPredicted RBP10.95□□□□□ -0.66
GAPVD1-213ENST00000469498 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.94□□□□□ -0.66
GAPVD1-213ENST00000469498 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
GAPVD1-213ENST00000469498 NKX1-1Q15270 411 aaPredicted RBP10.94□□□□□ -0.66
GAPVD1-213ENST00000469498 KRT27Q7Z3Y8 459 aa10.94□□□□□ -0.66
GAPVD1-213ENST00000469498 BBXQ8WY36 941 aaPredicted RBP10.94□□□□□ -0.66
GAPVD1-213ENST00000469498 ACSBG1Q96GR2 724 aa10.94□□□□□ -0.66
GAPVD1-213ENST00000469498 ZFP91Q96JP5 570 aaPredicted RBP10.94□□□□□ -0.66
GAPVD1-213ENST00000469498 OCEL1Q9H607 264 aa10.94□□□□□ -0.66
GAPVD1-213ENST00000469498 TAOK2Q9UL54 1235 aa10.94□□□□□ -0.66
GAPVD1-213ENST00000469498 RGPD3A6NKT7 1758 aaPredicted RBP10.93□□□□□ -0.66
GAPVD1-213ENST00000469498 RGPD4Q7Z3J3 1758 aa10.93□□□□□ -0.66
GAPVD1-213ENST00000469498 CALD1Q05682 793 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-213ENST00000469498 WDR63Q8IWG1 891 aa10.93□□□□□ -0.66
GAPVD1-213ENST00000469498 TSR2Q969E8 191 aaKnown RBP10.93□□□□□ -0.66
GAPVD1-213ENST00000469498 SLC52A2Q9HAB3 445 aa10.93□□□□□ -0.66
GAPVD1-213ENST00000469498 CICQ96RK0 1608 aaPredicted RBP10.93□□□□□ -0.66
GAPVD1-213ENST00000469498 KCPQ6ZWJ8 1503 aa10.93□□□□□ -0.66
GAPVD1-213ENST00000469498 ZNF831Q5JPB2 1677 aa10.92□□□□□ -0.66
GAPVD1-213ENST00000469498 IL16Q14005 1332 aa10.92□□□□□ -0.66
GAPVD1-213ENST00000469498 FANCIQ9NVI1 1328 aa10.92□□□□□ -0.66
GAPVD1-213ENST00000469498 CABP4P57796 275 aa10.92□□□□□ -0.66
GAPVD1-213ENST00000469498 SYTL4Q96C24 671 aaPredicted RBP10.92□□□□□ -0.66
GAPVD1-213ENST00000469498 IFT57Q9NWB7 429 aa10.92□□□□□ -0.66
GAPVD1-213ENST00000469498 MIS18AQ9NYP9 233 aa10.92□□□□□ -0.66
GAPVD1-213ENST00000469498 BCL9O00512 1426 aa10.92□□□□□ -0.66
GAPVD1-213ENST00000469498 ERVV-2B6SEH9 535 aa10.91□□□□□ -0.66
GAPVD1-213ENST00000469498 GNAI1P63096 354 aa10.91□□□□□ -0.66
GAPVD1-213ENST00000469498 SLFN5Q08AF3 891 aa10.91□□□□□ -0.66
GAPVD1-213ENST00000469498 NFATC2IPQ8NCF5 419 aa10.91□□□□□ -0.66
GAPVD1-213ENST00000469498 MBIPQ9NS73 344 aa10.91□□□□□ -0.66
GAPVD1-213ENST00000469498 TMOD3Q9NYL9 352 aa10.91□□□□□ -0.66
GAPVD1-213ENST00000469498 TSPYL4Q9UJ04 414 aa10.91□□□□□ -0.66
GAPVD1-213ENST00000469498 TUBGCP6Q96RT7 1819 aa10.91□□□□□ -0.66
GAPVD1-213ENST00000469498 BTBD11A6QL63 1104 aa10.9□□□□□ -0.66
GAPVD1-213ENST00000469498 E9PSI1 815 aa10.9□□□□□ -0.66
GAPVD1-213ENST00000469498 ZNF853P0CG23 659 aa10.9□□□□□ -0.66
GAPVD1-213ENST00000469498 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
GAPVD1-213ENST00000469498 TAF7Q15545 349 aaPredicted RBP10.9□□□□□ -0.66
GAPVD1-213ENST00000469498 CFAP44Q96MT7 982 aa10.9□□□□□ -0.66
GAPVD1-213ENST00000469498 MYH16Q9H6N6 1097 aa10.9□□□□□ -0.66
GAPVD1-213ENST00000469498 MYH14Q7Z406 1995 aaKnown RBP10.89□□□□□ -0.67
GAPVD1-213ENST00000469498 STK25O00506 426 aa10.89□□□□□ -0.67
GAPVD1-213ENST00000469498 KCNQ2O43526 872 aa10.89□□□□□ -0.67
GAPVD1-213ENST00000469498 SLC39A6Q13433 755 aa10.89□□□□□ -0.67
GAPVD1-213ENST00000469498 PDAP1Q13442 181 aaKnown RBP10.89□□□□□ -0.67
GAPVD1-213ENST00000469498 RREB1Q92766 1687 aa10.89□□□□□ -0.67
GAPVD1-213ENST00000469498 CHL1O00533 1208 aa10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 KCNQ3O43525 872 aa10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 PSEN1P49768 467 aa10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 NUP188Q5SRE5 1749 aa10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 DUSP27Q5VZP5 1158 aa10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 FAM196AQ6ZSG2 479 aa10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 PTF1AQ7RTS3 328 aa10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 PIGBQ92521 554 aa10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 HS3ST6Q96QI5 342 aa10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 BCL11BQ9C0K0 894 aaPredicted RBP10.88□□□□□ -0.67
GAPVD1-213ENST00000469498 EXOSC9Q06265 439 aaKnown RBP10.87□□□□□ -0.67
GAPVD1-213ENST00000469498 KRT24Q2M2I5 525 aa10.87□□□□□ -0.67
GAPVD1-213ENST00000469498 TRMT2AQ8IZ69 625 aaKnown RBP10.87□□□□□ -0.67
GAPVD1-213ENST00000469498 TTC5Q8N0Z6 440 aa10.87□□□□□ -0.67
GAPVD1-213ENST00000469498 KRTAP3-3Q9BYR6 98 aa10.87□□□□□ -0.67
GAPVD1-213ENST00000469498 KRTAP3-2Q9BYR7 98 aa10.87□□□□□ -0.67
GAPVD1-213ENST00000469498 N4BP2Q86UW6 1770 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms