RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 STARD3NLO95772 234 aa24.25■■□□□ 1.47
PHGDH-204ENST00000469443 DCTN1Q14203 1278 aa24.25■■□□□ 1.47
PHGDH-204ENST00000469443 FMNL2Q96PY5 1086 aa24.25■■□□□ 1.47
PHGDH-204ENST00000469443 TEX13AQ9BXU3 409 aaPredicted RBP24.25■■□□□ 1.47
PHGDH-204ENST00000469443 COL15A1P39059 1388 aa24.25■■□□□ 1.47
PHGDH-204ENST00000469443 N4BP2Q86UW6 1770 aaPredicted RBP24.24■■□□□ 1.47
PHGDH-204ENST00000469443 KCNQ3O43525 872 aa24.23■■□□□ 1.47
PHGDH-204ENST00000469443 MAPK8IP3Q9UPT6 1336 aa24.22■■□□□ 1.47
PHGDH-204ENST00000469443 ZPR1O75312 459 aa24.22■■□□□ 1.47
PHGDH-204ENST00000469443 YBX3P16989 372 aaKnown RBP eCLIP24.22■■□□□ 1.47
PHGDH-204ENST00000469443 NFE2L2Q16236 605 aa24.22■■□□□ 1.47
PHGDH-204ENST00000469443 KDM3BQ7LBC6 1761 aa24.21■■□□□ 1.47
PHGDH-204ENST00000469443 CANXP27824 592 aaKnown RBP24.21■■□□□ 1.47
PHGDH-204ENST00000469443 FKBP8Q14318 412 aa24.21■■□□□ 1.47
PHGDH-204ENST00000469443 PARP3Q9Y6F1 533 aa24.21■■□□□ 1.47
PHGDH-204ENST00000469443 AFDNP55196 1824 aaKnown RBP24.21■■□□□ 1.47
PHGDH-204ENST00000469443 C10orf71Q711Q0 1435 aa24.2■■□□□ 1.46
PHGDH-204ENST00000469443 USPL1Q5W0Q7 1092 aa24.2■■□□□ 1.46
PHGDH-204ENST00000469443 NARFQ9UHQ1 456 aa24.2■■□□□ 1.46
PHGDH-204ENST00000469443 GRIN3BO60391 1043 aa24.19■■□□□ 1.46
PHGDH-204ENST00000469443 TAF7Q15545 349 aaPredicted RBP24.19■■□□□ 1.46
PHGDH-204ENST00000469443 BRCA1P38398 1863 aaKnown RBP24.19■■□□□ 1.46
PHGDH-204ENST00000469443 EIF5P55010 431 aaKnown RBP24.18■■□□□ 1.46
PHGDH-204ENST00000469443 PRKRIP1Q9H875 184 aaPredicted RBP24.18■■□□□ 1.46
PHGDH-204ENST00000469443 SCN7AQ01118 1682 aa24.18■■□□□ 1.46
PHGDH-204ENST00000469443 LAMB4A4D0S4 1761 aa24.17■■□□□ 1.46
PHGDH-204ENST00000469443 PXDNLA1KZ92 1463 aa24.17■■□□□ 1.46
PHGDH-204ENST00000469443 A0A087WZG4 1122 aa24.16■■□□□ 1.46
PHGDH-204ENST00000469443 TM4SF1P30408 202 aa24.16■■□□□ 1.46
PHGDH-204ENST00000469443 DDR1Q08345 913 aa24.16■■□□□ 1.46
PHGDH-204ENST00000469443 NRXN2Q9P2S2 1712 aa24.15■■□□□ 1.46
PHGDH-204ENST00000469443 TGFB2P61812 414 aa24.15■■□□□ 1.46
PHGDH-204ENST00000469443 BCORQ6W2J9 1755 aa24.14■■□□□ 1.46
PHGDH-204ENST00000469443 A1BGP04217 495 aa24.14■■□□□ 1.45
PHGDH-204ENST00000469443 SNRPA1P09661 255 aaKnown RBP24.14■■□□□ 1.45
PHGDH-204ENST00000469443 IL6STP40189 918 aaPredicted RBP24.14■■□□□ 1.45
PHGDH-204ENST00000469443 USP16Q9Y5T5 823 aa24.14■■□□□ 1.45
PHGDH-204ENST00000469443 POLRMTO00411 1230 aaKnown RBP24.13■■□□□ 1.45
PHGDH-204ENST00000469443 PNISRQ8TF01 805 aaKnown RBP24.13■■□□□ 1.45
PHGDH-204ENST00000469443 BCL2L12Q9HB09 334 aa24.13■■□□□ 1.45
PHGDH-204ENST00000469443 MIS18AQ9NYP9 233 aa24.12■■□□□ 1.45
PHGDH-204ENST00000469443 WWC3Q9ULE0 1092 aa24.12■■□□□ 1.45
PHGDH-204ENST00000469443 PRAMEF22A3QJZ6 481 aa24.11■■□□□ 1.45
PHGDH-204ENST00000469443 NFIXQ14938 502 aa24.11■■□□□ 1.45
PHGDH-204ENST00000469443 WDR43Q15061 677 aaKnown RBP eCLIP24.11■■□□□ 1.45
PHGDH-204ENST00000469443 THUMPD2Q9BTF0 503 aaKnown RBP24.11■■□□□ 1.45
PHGDH-204ENST00000469443 ZNF330Q9Y3S2 320 aaPredicted RBP24.11■■□□□ 1.45
PHGDH-204ENST00000469443 ARFGEF1Q9Y6D6 1849 aa24.1■■□□□ 1.45
PHGDH-204ENST00000469443 A0A0G2JLW4 131 aa24.1■■□□□ 1.45
PHGDH-204ENST00000469443 RIPK4P57078 832 aa24.1■■□□□ 1.45
PHGDH-204ENST00000469443 NPM2Q86SE8 214 aaKnown RBP24.1■■□□□ 1.45
PHGDH-204ENST00000469443 DPEP1P16444 411 aa24.08■■□□□ 1.45
PHGDH-204ENST00000469443 TMPOP42166 694 aaKnown RBP24.08■■□□□ 1.45
PHGDH-204ENST00000469443 TBC1D2BQ9UPU7 963 aa24.08■■□□□ 1.45
PHGDH-204ENST00000469443 CCDC146Q8IYE0 955 aa24.07■■□□□ 1.44
PHGDH-204ENST00000469443 ZNF784Q8NCA9 323 aaPredicted RBP24.07■■□□□ 1.44
PHGDH-204ENST00000469443 DLEC1Q9Y238 1755 aa24.06■■□□□ 1.44
PHGDH-204ENST00000469443 LMOD3Q0VAK6 560 aa24.06■■□□□ 1.44
PHGDH-204ENST00000469443 RUNDC1Q96C34 613 aa24.06■■□□□ 1.44
PHGDH-204ENST00000469443 SERPINB2P05120 415 aa24.05■■□□□ 1.44
PHGDH-204ENST00000469443 PIP4K2AP48426 406 aaPredicted RBP24.05■■□□□ 1.44
PHGDH-204ENST00000469443 EIF4A1P60842 406 aaKnown RBP24.05■■□□□ 1.44
PHGDH-204ENST00000469443 ADAMTS8Q9UP79 889 aa24.05■■□□□ 1.44
PHGDH-204ENST00000469443 CAMTA2O94983 1202 aa24.04■■□□□ 1.44
PHGDH-204ENST00000469443 KCNA3P22001 575 aa24.04■■□□□ 1.44
PHGDH-204ENST00000469443 DZIP3Q86Y13 1208 aaKnown RBP24.04■■□□□ 1.44
PHGDH-204ENST00000469443 ANKRD31Q8N7Z5 1873 aa24.04■■□□□ 1.44
PHGDH-204ENST00000469443 ZNF316A6NFI3 1004 aaPredicted RBP24.03■■□□□ 1.44
PHGDH-204ENST00000469443 GIGYF1O75420 1035 aaPredicted RBP24.03■■□□□ 1.44
PHGDH-204ENST00000469443 TBC1D9BQ66K14 1250 aa24.03■■□□□ 1.44
PHGDH-204ENST00000469443 BICDL1Q6ZP65 573 aa24.03■■□□□ 1.44
PHGDH-204ENST00000469443 BCS1LQ9Y276 419 aa24.03■■□□□ 1.44
PHGDH-204ENST00000469443 RRP7AQ9Y3A4 280 aaKnown RBP24.03■■□□□ 1.44
PHGDH-204ENST00000469443 NBPF26B4DH59 902 aa24.02■■□□□ 1.44
PHGDH-204ENST00000469443 NBPF10Q6P3W6 841 aaKnown RBP24.02■■□□□ 1.44
PHGDH-204ENST00000469443 NBPF15Q8N660 670 aa24.02■■□□□ 1.44
PHGDH-204ENST00000469443 NEUROD2Q15784 382 aa24.01■■□□□ 1.43
PHGDH-204ENST00000469443 BABAM1Q9NWV8 329 aa24.01■■□□□ 1.43
PHGDH-204ENST00000469443 PIM2Q9P1W9 311 aa24.01■■□□□ 1.43
PHGDH-204ENST00000469443 TSPYL4Q9UJ04 414 aa24.01■■□□□ 1.43
PHGDH-204ENST00000469443 CARMIL3Q8ND23 1372 aa24■■□□□ 1.43
PHGDH-204ENST00000469443 NUP98P52948 1817 aa23.99■■□□□ 1.43
PHGDH-204ENST00000469443 CHRNA5P30532 468 aa23.99■■□□□ 1.43
PHGDH-204ENST00000469443 CLEC4GQ6UXB4 293 aa23.98■■□□□ 1.43
PHGDH-204ENST00000469443 SETDB2Q96T68 719 aa23.97■■□□□ 1.43
PHGDH-204ENST00000469443 TRIM35Q9UPQ4 493 aa23.97■■□□□ 1.43
PHGDH-204ENST00000469443 DALRD3Q5D0E6 543 aaKnown RBP23.96■■□□□ 1.43
PHGDH-204ENST00000469443 ZNF652Q9Y2D9 606 aa23.96■■□□□ 1.43
PHGDH-204ENST00000469443 RGL2O15211 777 aa23.95■■□□□ 1.42
PHGDH-204ENST00000469443 COL11A2P13942 1736 aaPredicted RBP23.95■■□□□ 1.42
PHGDH-204ENST00000469443 ADCY9O60503 1353 aa23.94■■□□□ 1.42
PHGDH-204ENST00000469443 PRR5LQ6MZQ0 368 aa23.94■■□□□ 1.42
PHGDH-204ENST00000469443 SBF1O95248 1867 aa23.94■■□□□ 1.42
PHGDH-204ENST00000469443 ATP10DQ9P241 1426 aa23.93■■□□□ 1.42
PHGDH-204ENST00000469443 ERBB4Q15303 1308 aa23.93■■□□□ 1.42
PHGDH-204ENST00000469443 ARHGAP27Q6ZUM4 889 aa23.93■■□□□ 1.42
PHGDH-204ENST00000469443 CACNA1SQ13698 1873 aa23.93■■□□□ 1.42
PHGDH-204ENST00000469443 C2CD5Q86YS7 1000 aa23.92■■□□□ 1.42
PHGDH-204ENST00000469443 BRIP1Q9BX63 1249 aa23.92■■□□□ 1.42
PHGDH-204ENST00000469443 H0YIN7 160 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms