RNA–Protein interactions for RNA: ENST00000469217.5

PCCB-209, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PCCB, Length 1,841 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-209ENST00000469217 TXNRD1Q16881 649 aa22.34■■□□□ 1.17
PCCB-209ENST00000469217 ILDR2Q71H61 639 aa22.34■■□□□ 1.17
PCCB-209ENST00000469217 CHMP4AQ9BY43 222 aa22.34■■□□□ 1.17
PCCB-209ENST00000469217 SMC4Q9NTJ3 1288 aa22.34■■□□□ 1.17
PCCB-209ENST00000469217 CHPF2Q9P2E5 772 aa22.34■■□□□ 1.17
PCCB-209ENST00000469217 A1BGP04217 495 aa22.33■■□□□ 1.16
PCCB-209ENST00000469217 SLC4A2P04920 1241 aa22.32■■□□□ 1.16
PCCB-209ENST00000469217 SLC27A3Q5K4L6 730 aa22.32■■□□□ 1.16
PCCB-209ENST00000469217 LINC00116Q8NCU8 138 aa22.32■■□□□ 1.16
PCCB-209ENST00000469217 STK31Q9BXU1 1019 aa22.32■■□□□ 1.16
PCCB-209ENST00000469217 ANXA1P04083 346 aa22.31■■□□□ 1.16
PCCB-209ENST00000469217 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
PCCB-209ENST00000469217 PDIA6Q15084 440 aa22.31■■□□□ 1.16
PCCB-209ENST00000469217 CCDC125Q86Z20 511 aa22.31■■□□□ 1.16
PCCB-209ENST00000469217 DBF4Q9UBU7 674 aaPredicted RBP22.31■■□□□ 1.16
PCCB-209ENST00000469217 COL5A3P25940 1745 aaPredicted RBP22.31■■□□□ 1.16
PCCB-209ENST00000469217 EN1Q05925 392 aaPredicted RBP22.31■■□□□ 1.16
PCCB-209ENST00000469217 PROSER3Q2NL68 480 aa22.31■■□□□ 1.16
PCCB-209ENST00000469217 MRPL50Q8N5N7 158 aaKnown RBP22.31■■□□□ 1.16
PCCB-209ENST00000469217 RGPD3A6NKT7 1758 aaPredicted RBP22.31■■□□□ 1.16
PCCB-209ENST00000469217 RGPD4Q7Z3J3 1758 aa22.31■■□□□ 1.16
PCCB-209ENST00000469217 NBPF26B4DH59 902 aa22.3■■□□□ 1.16
PCCB-209ENST00000469217 NBPF14Q5TI25 921 aa22.3■■□□□ 1.16
PCCB-209ENST00000469217 NBPF10Q6P3W6 841 aaKnown RBP22.3■■□□□ 1.16
PCCB-209ENST00000469217 NBPF15Q8N660 670 aa22.3■■□□□ 1.16
PCCB-209ENST00000469217 CAMKK2Q96RR4 588 aa22.3■■□□□ 1.16
PCCB-209ENST00000469217 CRKLP46109 303 aaKnown RBP22.29■■□□□ 1.16
PCCB-209ENST00000469217 BAG6P46379 1132 aa22.29■■□□□ 1.16
PCCB-209ENST00000469217 DEFB132Q7Z7B7 95 aa22.29■■□□□ 1.16
PCCB-209ENST00000469217 DDX21Q9NR30 783 aaKnown RBP eCLIP22.29■■□□□ 1.16
PCCB-209ENST00000469217 TAF1LQ8IZX4 1826 aa22.29■■□□□ 1.16
PCCB-209ENST00000469217 MYL6BP14649 208 aa22.29■■□□□ 1.16
PCCB-209ENST00000469217 EZH2Q15910 746 aaKnown RBP22.29■■□□□ 1.16
PCCB-209ENST00000469217 ERBB4Q15303 1308 aa22.29■■□□□ 1.16
PCCB-209ENST00000469217 BRPF1P55201 1214 aaPredicted RBP22.28■■□□□ 1.16
PCCB-209ENST00000469217 INTS5Q6P9B9 1019 aaKnown RBP22.28■■□□□ 1.16
PCCB-209ENST00000469217 ZBTB1Q9Y2K1 713 aa22.28■■□□□ 1.16
PCCB-209ENST00000469217 UPF1Q92900 1129 aaKnown RBP eCLIP22.27■■□□□ 1.16
PCCB-209ENST00000469217 PHAXQ9H814 394 aaKnown RBP22.27■■□□□ 1.16
PCCB-209ENST00000469217 CCDC87Q9NVE4 849 aa22.27■■□□□ 1.16
PCCB-209ENST00000469217 CANXP27824 592 aaKnown RBP22.27■■□□□ 1.15
PCCB-209ENST00000469217 G2E3Q7L622 706 aa22.27■■□□□ 1.15
PCCB-209ENST00000469217 LRP10Q7Z4F1 713 aa22.27■■□□□ 1.15
PCCB-209ENST00000469217 SUPT16HQ9Y5B9 1047 aaKnown RBP22.27■■□□□ 1.15
PCCB-209ENST00000469217 MYH14Q7Z406 1995 aaKnown RBP22.26■■□□□ 1.15
PCCB-209ENST00000469217 CNTNAP4Q9C0A0 1308 aa22.26■■□□□ 1.15
PCCB-209ENST00000469217 HYPKQ9NX55 129 aa22.26■■□□□ 1.15
PCCB-209ENST00000469217 NOB1Q9ULX3 412 aaKnown RBP22.25■■□□□ 1.15
PCCB-209ENST00000469217 GTF3C3Q9Y5Q9 886 aa22.25■■□□□ 1.15
PCCB-209ENST00000469217 C4BP0C0L5 1744 aa22.25■■□□□ 1.15
PCCB-209ENST00000469217 RREB1Q92766 1687 aa22.24■■□□□ 1.15
PCCB-209ENST00000469217 FRAT1Q92837 279 aaPredicted RBP22.24■■□□□ 1.15
PCCB-209ENST00000469217 CACNA1FO60840 1977 aa22.24■■□□□ 1.15
PCCB-209ENST00000469217 RC3H1Q5TC82 1133 aaKnown RBP22.24■■□□□ 1.15
PCCB-209ENST00000469217 KIF16BQ96L93 1317 aa22.23■■□□□ 1.15
PCCB-209ENST00000469217 FLIIQ13045 1269 aa22.23■■□□□ 1.15
PCCB-209ENST00000469217 PLIN1O60240 522 aa22.22■■□□□ 1.15
PCCB-209ENST00000469217 IL6STP40189 918 aaPredicted RBP22.22■■□□□ 1.15
PCCB-209ENST00000469217 ZNF330Q9Y3S2 320 aaPredicted RBP22.22■■□□□ 1.15
PCCB-209ENST00000469217 GNPATO15228 680 aa22.21■■□□□ 1.15
PCCB-209ENST00000469217 EIF5P55010 431 aaKnown RBP22.21■■□□□ 1.15
PCCB-209ENST00000469217 AIMP1Q12904 312 aaKnown RBP22.21■■□□□ 1.15
PCCB-209ENST00000469217 COPS6Q7L5N1 327 aa22.21■■□□□ 1.15
PCCB-209ENST00000469217 XAGE3Q8WTP9 111 aa22.21■■□□□ 1.15
PCCB-209ENST00000469217 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.14
PCCB-209ENST00000469217 RRP1P56182 461 aaKnown RBP22.2■■□□□ 1.14
PCCB-209ENST00000469217 AK7Q96M32 723 aa22.2■■□□□ 1.14
PCCB-209ENST00000469217 RNF123Q5XPI4 1314 aa22.2■■□□□ 1.14
PCCB-209ENST00000469217 RPS6KA4O75676 772 aa22.2■■□□□ 1.14
PCCB-209ENST00000469217 FKBP5Q13451 457 aaPredicted RBP22.2■■□□□ 1.14
PCCB-209ENST00000469217 PTPRCP08575 1304 aa22.19■■□□□ 1.14
PCCB-209ENST00000469217 ZKSCAN2Q63HK3 967 aa22.19■■□□□ 1.14
PCCB-209ENST00000469217 SMIM5Q71RC9 77 aa22.19■■□□□ 1.14
PCCB-209ENST00000469217 AMIGO3Q86WK7 504 aa22.19■■□□□ 1.14
PCCB-209ENST00000469217 IPO8O15397 1037 aaKnown RBP22.18■■□□□ 1.14
PCCB-209ENST00000469217 TTLL7Q6ZT98 887 aa22.18■■□□□ 1.14
PCCB-209ENST00000469217 ARHGAP45Q92619 1136 aa22.18■■□□□ 1.14
PCCB-209ENST00000469217 TRIM27P14373 513 aa22.17■■□□□ 1.14
PCCB-209ENST00000469217 ZNF827Q17R98 1081 aa22.17■■□□□ 1.14
PCCB-209ENST00000469217 ATF7IPQ6VMQ6 1270 aa22.17■■□□□ 1.14
PCCB-209ENST00000469217 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.17■■□□□ 1.14
PCCB-209ENST00000469217 AKT1S1Q96B36 256 aa22.17■■□□□ 1.14
PCCB-209ENST00000469217 TNNQ9UQP3 1299 aa22.17■■□□□ 1.14
PCCB-209ENST00000469217 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
PCCB-209ENST00000469217 NPM2Q86SE8 214 aaKnown RBP22.17■■□□□ 1.14
PCCB-209ENST00000469217 COL15A1P39059 1388 aa22.16■■□□□ 1.14
PCCB-209ENST00000469217 ARXQ96QS3 562 aa22.16■■□□□ 1.14
PCCB-209ENST00000469217 NUP188Q5SRE5 1749 aa22.16■■□□□ 1.14
PCCB-209ENST00000469217 PI4KAP2A4QPH2 592 aa22.15■■□□□ 1.14
PCCB-209ENST00000469217 F6X3S4 739 aa22.15■■□□□ 1.14
PCCB-209ENST00000469217 DDX58O95786 925 aaKnown RBP22.15■■□□□ 1.14
PCCB-209ENST00000469217 ANKRD13DQ6ZTN6 518 aa22.15■■□□□ 1.14
PCCB-209ENST00000469217 PI4KAP1Q8N8J0 262 aa22.15■■□□□ 1.14
PCCB-209ENST00000469217 CLUAP1Q96AJ1 413 aa22.15■■□□□ 1.14
PCCB-209ENST00000469217 TBC1D2BQ9UPU7 963 aa22.15■■□□□ 1.14
PCCB-209ENST00000469217 UBR3Q6ZT12 1888 aa22.14■■□□□ 1.14
PCCB-209ENST00000469217 ADCY9O60503 1353 aa22.14■■□□□ 1.14
PCCB-209ENST00000469217 PHF14O94880 888 aa22.14■■□□□ 1.13
PCCB-209ENST00000469217 KSR2Q6VAB6 950 aa22.14■■□□□ 1.13
PCCB-209ENST00000469217 DZIP3Q86Y13 1208 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms