RNA–Protein interactions for RNA: ENST00000468983.1

ARRDC1-206, Transcript of arrestin domain containing 1, humanhuman

TSL 4

Gene ARRDC1, Length 386 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARRDC1-206ENST00000468983 PRKRIP1Q9H875 184 aaPredicted RBP16.42■□□□□ 0.22
ARRDC1-206ENST00000468983 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
ARRDC1-206ENST00000468983 STARD3NLO95772 234 aa16.41■□□□□ 0.22
ARRDC1-206ENST00000468983 NEFMP07197 916 aa16.41■□□□□ 0.22
ARRDC1-206ENST00000468983 YBX3P16989 372 aaKnown RBP eCLIP16.41■□□□□ 0.22
ARRDC1-206ENST00000468983 NFE2L2Q16236 605 aa16.41■□□□□ 0.22
ARRDC1-206ENST00000468983 USPL1Q5W0Q7 1092 aa16.41■□□□□ 0.22
ARRDC1-206ENST00000468983 USP42Q9H9J4 1324 aaKnown RBP16.41■□□□□ 0.22
ARRDC1-206ENST00000468983 A1BGP04217 495 aa16.4■□□□□ 0.22
ARRDC1-206ENST00000468983 TAF7Q15545 349 aaPredicted RBP16.4■□□□□ 0.22
ARRDC1-206ENST00000468983 THUMPD2Q9BTF0 503 aaKnown RBP16.4■□□□□ 0.22
ARRDC1-206ENST00000468983 WWC3Q9ULE0 1092 aa16.4■□□□□ 0.22
ARRDC1-206ENST00000468983 USP16Q9Y5T5 823 aa16.4■□□□□ 0.22
ARRDC1-206ENST00000468983 CHD4Q14839 1912 aa16.39■□□□□ 0.21
ARRDC1-206ENST00000468983 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
ARRDC1-206ENST00000468983 PNNQ9H307 717 aaKnown RBP16.39■□□□□ 0.21
ARRDC1-206ENST00000468983 ZPR1O75312 459 aa16.38■□□□□ 0.21
ARRDC1-206ENST00000468983 TM4SF1P30408 202 aa16.38■□□□□ 0.21
ARRDC1-206ENST00000468983 EIF5P55010 431 aaKnown RBP16.38■□□□□ 0.21
ARRDC1-206ENST00000468983 DDR1Q08345 913 aa16.38■□□□□ 0.21
ARRDC1-206ENST00000468983 BCL2L12Q9HB09 334 aa16.38■□□□□ 0.21
ARRDC1-206ENST00000468983 NARFQ9UHQ1 456 aa16.38■□□□□ 0.21
ARRDC1-206ENST00000468983 PARP3Q9Y6F1 533 aa16.38■□□□□ 0.21
ARRDC1-206ENST00000468983 MAPK8IP3Q9UPT6 1336 aa16.38■□□□□ 0.21
ARRDC1-206ENST00000468983 COL15A1P39059 1388 aa16.38■□□□□ 0.21
ARRDC1-206ENST00000468983 PIP4K2AP48426 406 aaPredicted RBP16.37■□□□□ 0.21
ARRDC1-206ENST00000468983 CCDC146Q8IYE0 955 aa16.37■□□□□ 0.21
ARRDC1-206ENST00000468983 N4BP2Q86UW6 1770 aaPredicted RBP16.36■□□□□ 0.21
ARRDC1-206ENST00000468983 KIF13BQ9NQT8 1826 aa16.36■□□□□ 0.21
ARRDC1-206ENST00000468983 ZNF316A6NFI3 1004 aaPredicted RBP16.36■□□□□ 0.21
ARRDC1-206ENST00000468983 RIPK4P57078 832 aa16.36■□□□□ 0.21
ARRDC1-206ENST00000468983 ADAMTS8Q9UP79 889 aa16.36■□□□□ 0.21
ARRDC1-206ENST00000468983 A0A0G2JLW4 131 aa16.35■□□□□ 0.21
ARRDC1-206ENST00000468983 SNRPA1P09661 255 aaKnown RBP16.35■□□□□ 0.21
ARRDC1-206ENST00000468983 TMPOP42166 694 aaKnown RBP16.35■□□□□ 0.21
ARRDC1-206ENST00000468983 TBC1D2BQ9UPU7 963 aa16.35■□□□□ 0.21
ARRDC1-206ENST00000468983 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
ARRDC1-206ENST00000468983 ZNF330Q9Y3S2 320 aaPredicted RBP16.35■□□□□ 0.21
ARRDC1-206ENST00000468983 POLRMTO00411 1230 aaKnown RBP16.34■□□□□ 0.21
ARRDC1-206ENST00000468983 IL6STP40189 918 aaPredicted RBP16.34■□□□□ 0.21
ARRDC1-206ENST00000468983 NFIXQ14938 502 aa16.34■□□□□ 0.21
ARRDC1-206ENST00000468983 KIAA1551Q9HCM1 1747 aa16.33■□□□□ 0.21
ARRDC1-206ENST00000468983 GRIN3BO60391 1043 aa16.33■□□□□ 0.2
ARRDC1-206ENST00000468983 WDR43Q15061 677 aaKnown RBP eCLIP16.33■□□□□ 0.2
ARRDC1-206ENST00000468983 NEUROD2Q15784 382 aa16.33■□□□□ 0.2
ARRDC1-206ENST00000468983 AFDNP55196 1824 aaKnown RBP16.33■□□□□ 0.2
ARRDC1-206ENST00000468983 A0A087WZG4 1122 aa16.32■□□□□ 0.2
ARRDC1-206ENST00000468983 DPEP1P16444 411 aa16.32■□□□□ 0.2
ARRDC1-206ENST00000468983 TGFB2P61812 414 aa16.32■□□□□ 0.2
ARRDC1-206ENST00000468983 CCDC184Q52MB2 194 aa16.32■□□□□ 0.2
ARRDC1-206ENST00000468983 C10orf71Q711Q0 1435 aa16.32■□□□□ 0.2
ARRDC1-206ENST00000468983 KDM3BQ7LBC6 1761 aa16.32■□□□□ 0.2
ARRDC1-206ENST00000468983 PNISRQ8TF01 805 aaKnown RBP16.32■□□□□ 0.2
ARRDC1-206ENST00000468983 PXDNLA1KZ92 1463 aa16.31■□□□□ 0.2
ARRDC1-206ENST00000468983 NBPF26B4DH59 902 aa16.31■□□□□ 0.2
ARRDC1-206ENST00000468983 KCNA3P22001 575 aa16.31■□□□□ 0.2
ARRDC1-206ENST00000468983 EIF4A1P60842 406 aaKnown RBP16.31■□□□□ 0.2
ARRDC1-206ENST00000468983 NBPF10Q6P3W6 841 aaKnown RBP16.31■□□□□ 0.2
ARRDC1-206ENST00000468983 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
ARRDC1-206ENST00000468983 NBPF15Q8N660 670 aa16.31■□□□□ 0.2
ARRDC1-206ENST00000468983 RUNDC1Q96C34 613 aa16.31■□□□□ 0.2
ARRDC1-206ENST00000468983 SERPINB2P05120 415 aa16.3■□□□□ 0.2
ARRDC1-206ENST00000468983 TBC1D9BQ66K14 1250 aa16.3■□□□□ 0.2
ARRDC1-206ENST00000468983 GIGYF1O75420 1035 aaPredicted RBP16.29■□□□□ 0.2
ARRDC1-206ENST00000468983 CAMTA2O94983 1202 aa16.29■□□□□ 0.2
ARRDC1-206ENST00000468983 TRIM35Q9UPQ4 493 aa16.29■□□□□ 0.2
ARRDC1-206ENST00000468983 CHRNA5P30532 468 aa16.28■□□□□ 0.2
ARRDC1-206ENST00000468983 DZIP3Q86Y13 1208 aaKnown RBP16.28■□□□□ 0.2
ARRDC1-206ENST00000468983 ZNF784Q8NCA9 323 aaPredicted RBP16.28■□□□□ 0.2
ARRDC1-206ENST00000468983 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.2
ARRDC1-206ENST00000468983 TSPYL4Q9UJ04 414 aa16.27■□□□□ 0.2
ARRDC1-206ENST00000468983 BCS1LQ9Y276 419 aa16.27■□□□□ 0.2
ARRDC1-206ENST00000468983 NRXN2Q9P2S2 1712 aa16.27■□□□□ 0.19
ARRDC1-206ENST00000468983 BRCA1P38398 1863 aaKnown RBP16.27■□□□□ 0.19
ARRDC1-206ENST00000468983 CCDC24Q8N4L8 307 aa16.26■□□□□ 0.19
ARRDC1-206ENST00000468983 LMOD3Q0VAK6 560 aa16.25■□□□□ 0.19
ARRDC1-206ENST00000468983 NGEFQ8N5V2 710 aa16.25■□□□□ 0.19
ARRDC1-206ENST00000468983 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
ARRDC1-206ENST00000468983 LAMB4A4D0S4 1761 aa16.24■□□□□ 0.19
ARRDC1-206ENST00000468983 APAF1O14727 1248 aa16.24■□□□□ 0.19
ARRDC1-206ENST00000468983 PIM2Q9P1W9 311 aa16.24■□□□□ 0.19
ARRDC1-206ENST00000468983 LAS1LQ9Y4W2 734 aaKnown RBP16.24■□□□□ 0.19
ARRDC1-206ENST00000468983 CARMIL3Q8ND23 1372 aa16.24■□□□□ 0.19
ARRDC1-206ENST00000468983 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
ARRDC1-206ENST00000468983 CHL1O00533 1208 aa16.23■□□□□ 0.19
ARRDC1-206ENST00000468983 HLFQ16534 295 aa16.23■□□□□ 0.19
ARRDC1-206ENST00000468983 SETDB2Q96T68 719 aa16.23■□□□□ 0.19
ARRDC1-206ENST00000468983 MYL6BP14649 208 aa16.22■□□□□ 0.19
ARRDC1-206ENST00000468983 EIF2S2P20042 333 aaKnown RBP16.22■□□□□ 0.19
ARRDC1-206ENST00000468983 KRT24Q2M2I5 525 aa16.22■□□□□ 0.19
ARRDC1-206ENST00000468983 PRR5LQ6MZQ0 368 aa16.22■□□□□ 0.19
ARRDC1-206ENST00000468983 TTLL7Q6ZT98 887 aa16.22■□□□□ 0.19
ARRDC1-206ENST00000468983 BABAM1Q9NWV8 329 aa16.22■□□□□ 0.19
ARRDC1-206ENST00000468983 ANKRD31Q8N7Z5 1873 aa16.21■□□□□ 0.19
ARRDC1-206ENST00000468983 SENP3-EIF4A1A0A087X0R7 540 aa16.21■□□□□ 0.19
ARRDC1-206ENST00000468983 DALRD3Q5D0E6 543 aaKnown RBP16.21■□□□□ 0.19
ARRDC1-206ENST00000468983 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
ARRDC1-206ENST00000468983 ARHGAP27Q6ZUM4 889 aa16.21■□□□□ 0.19
ARRDC1-206ENST00000468983 ARFGEF1Q9Y6D6 1849 aa16.2■□□□□ 0.18
ARRDC1-206ENST00000468983 ANP32CO43423 234 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms