RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 TEFQ10587 303 aa19.85■□□□□ 0.77
SDCCAG3-209ENST00000468963 ZNF790Q6PG37 636 aa19.85■□□□□ 0.77
SDCCAG3-209ENST00000468963 ZNF496Q96IT1 587 aaPredicted RBP19.85■□□□□ 0.77
SDCCAG3-209ENST00000468963 BCL2L12Q9HB09 334 aa19.85■□□□□ 0.77
SDCCAG3-209ENST00000468963 NUDCQ9Y266 331 aa19.85■□□□□ 0.77
SDCCAG3-209ENST00000468963 TTC5Q8N0Z6 440 aa19.84■□□□□ 0.77
SDCCAG3-209ENST00000468963 CEMIPQ8WUJ3 1361 aa19.83■□□□□ 0.77
SDCCAG3-209ENST00000468963 FCHSD2O94868 740 aa19.83■□□□□ 0.77
SDCCAG3-209ENST00000468963 STARD3NLO95772 234 aa19.83■□□□□ 0.77
SDCCAG3-209ENST00000468963 EIF5P55010 431 aaKnown RBP19.83■□□□□ 0.77
SDCCAG3-209ENST00000468963 NFIXQ14938 502 aa19.83■□□□□ 0.77
SDCCAG3-209ENST00000468963 GPBP1L1Q9HC44 474 aaPredicted RBP19.83■□□□□ 0.77
SDCCAG3-209ENST00000468963 SENP3-EIF4A1A0A087X0R7 540 aa19.82■□□□□ 0.76
SDCCAG3-209ENST00000468963 CANXP27824 592 aaKnown RBP19.82■□□□□ 0.76
SDCCAG3-209ENST00000468963 ARHGAP27Q6ZUM4 889 aa19.82■□□□□ 0.76
SDCCAG3-209ENST00000468963 TEX13AQ9BXU3 409 aaPredicted RBP19.82■□□□□ 0.76
SDCCAG3-209ENST00000468963 PIM2Q9P1W9 311 aa19.82■□□□□ 0.76
SDCCAG3-209ENST00000468963 UBR2Q8IWV8 1755 aa19.82■□□□□ 0.76
SDCCAG3-209ENST00000468963 COL15A1P39059 1388 aa19.82■□□□□ 0.76
SDCCAG3-209ENST00000468963 HEG1Q9ULI3 1381 aa19.82■□□□□ 0.76
SDCCAG3-209ENST00000468963 KCNQ3O43525 872 aa19.81■□□□□ 0.76
SDCCAG3-209ENST00000468963 U2AF1L5P0DN76 240 aaPredicted RBP19.81■□□□□ 0.76
SDCCAG3-209ENST00000468963 U2AF1Q01081 240 aaKnown RBP eCLIP19.81■□□□□ 0.765e-8■□□□□ 8.6
SDCCAG3-209ENST00000468963 CEP350Q5VT06 3117 aa19.81■□□□□ 0.76
SDCCAG3-209ENST00000468963 ZNF526Q8TF50 670 aaPredicted RBP19.8■□□□□ 0.76
SDCCAG3-209ENST00000468963 CHRNA5P30532 468 aa19.79■□□□□ 0.76
SDCCAG3-209ENST00000468963 FMNL2Q96PY5 1086 aa19.79■□□□□ 0.76
SDCCAG3-209ENST00000468963 BRCA1P38398 1863 aaKnown RBP19.79■□□□□ 0.76
SDCCAG3-209ENST00000468963 SIPA1L3O60292 1781 aaPredicted RBP19.78■□□□□ 0.76
SDCCAG3-209ENST00000468963 A0A087WZG4 1122 aa19.78■□□□□ 0.76
SDCCAG3-209ENST00000468963 BTBD11A6QL63 1104 aa19.78■□□□□ 0.76
SDCCAG3-209ENST00000468963 SERPINB2P05120 415 aa19.78■□□□□ 0.76
SDCCAG3-209ENST00000468963 DALRD3Q5D0E6 543 aaKnown RBP19.78■□□□□ 0.76
SDCCAG3-209ENST00000468963 A1BGP04217 495 aa19.76■□□□□ 0.75
SDCCAG3-209ENST00000468963 IL6STP40189 918 aaPredicted RBP19.76■□□□□ 0.75
SDCCAG3-209ENST00000468963 KIF3CO14782 793 aa19.75■□□□□ 0.75
SDCCAG3-209ENST00000468963 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
SDCCAG3-209ENST00000468963 MCM10Q7L590 875 aa19.75■□□□□ 0.75
SDCCAG3-209ENST00000468963 USP16Q9Y5T5 823 aa19.75■□□□□ 0.75
SDCCAG3-209ENST00000468963 RTF1Q92541 710 aaKnown RBP19.74■□□□□ 0.75
SDCCAG3-209ENST00000468963 TBC1D2BQ9UPU7 963 aa19.74■□□□□ 0.75
SDCCAG3-209ENST00000468963 AFDNP55196 1824 aaKnown RBP19.74■□□□□ 0.75
SDCCAG3-209ENST00000468963 DCTN1Q14203 1278 aa19.73■□□□□ 0.75
SDCCAG3-209ENST00000468963 TBC1D9BQ66K14 1250 aa19.73■□□□□ 0.75
SDCCAG3-209ENST00000468963 ARFGEF1Q9Y6D6 1849 aa19.73■□□□□ 0.75
SDCCAG3-209ENST00000468963 NRXN2Q9P2S2 1712 aa19.73■□□□□ 0.75
SDCCAG3-209ENST00000468963 C9orf131Q5VYM1 1079 aa19.72■□□□□ 0.75
SDCCAG3-209ENST00000468963 BICDL1Q6ZP65 573 aa19.72■□□□□ 0.75
SDCCAG3-209ENST00000468963 PRAMEF22A3QJZ6 481 aa19.71■□□□□ 0.75
SDCCAG3-209ENST00000468963 CAMTA2O94983 1202 aa19.7■□□□□ 0.74
SDCCAG3-209ENST00000468963 SNRPA1P09661 255 aaKnown RBP19.7■□□□□ 0.74
SDCCAG3-209ENST00000468963 TAF7Q15545 349 aaPredicted RBP19.69■□□□□ 0.74
SDCCAG3-209ENST00000468963 C2CD5Q86YS7 1000 aa19.69■□□□□ 0.74
SDCCAG3-209ENST00000468963 PLEKHF1Q96S99 279 aa19.69■□□□□ 0.74
SDCCAG3-209ENST00000468963 ZNF330Q9Y3S2 320 aaPredicted RBP19.69■□□□□ 0.74
SDCCAG3-209ENST00000468963 H0YIN7 160 aa19.68■□□□□ 0.74
SDCCAG3-209ENST00000468963 TTLL6Q8N841 843 aa19.68■□□□□ 0.74
SDCCAG3-209ENST00000468963 CARMIL3Q8ND23 1372 aa19.68■□□□□ 0.74
SDCCAG3-209ENST00000468963 BRIP1Q9BX63 1249 aa19.67■□□□□ 0.74
SDCCAG3-209ENST00000468963 HSPA6P17066 643 aa19.66■□□□□ 0.74
SDCCAG3-209ENST00000468963 PIP4K2AP48426 406 aaPredicted RBP19.66■□□□□ 0.74
SDCCAG3-209ENST00000468963 PRR5LQ6MZQ0 368 aa19.66■□□□□ 0.74
SDCCAG3-209ENST00000468963 NPM2Q86SE8 214 aaKnown RBP19.66■□□□□ 0.74
SDCCAG3-209ENST00000468963 DZIP3Q86Y13 1208 aaKnown RBP19.66■□□□□ 0.74
SDCCAG3-209ENST00000468963 SETDB2Q96T68 719 aa19.66■□□□□ 0.74
SDCCAG3-209ENST00000468963 MIS18AQ9NYP9 233 aa19.66■□□□□ 0.74
SDCCAG3-209ENST00000468963 NBPF26B4DH59 902 aa19.65■□□□□ 0.74
SDCCAG3-209ENST00000468963 NBPF10Q6P3W6 841 aaKnown RBP19.65■□□□□ 0.74
SDCCAG3-209ENST00000468963 NBPF15Q8N660 670 aa19.65■□□□□ 0.74
SDCCAG3-209ENST00000468963 NMRK2Q9NPI5 230 aa19.65■□□□□ 0.74
SDCCAG3-209ENST00000468963 RNF181Q9P0P0 153 aa19.65■□□□□ 0.74
SDCCAG3-209ENST00000468963 PDZRN3Q9UPQ7 1066 aa19.65■□□□□ 0.74
SDCCAG3-209ENST00000468963 SBF1O95248 1867 aa19.65■□□□□ 0.74
SDCCAG3-209ENST00000468963 CLEC4GQ6UXB4 293 aa19.64■□□□□ 0.73
SDCCAG3-209ENST00000468963 CCDC24Q8N4L8 307 aa19.64■□□□□ 0.73
SDCCAG3-209ENST00000468963 TOMM70O94826 608 aa19.63■□□□□ 0.73
SDCCAG3-209ENST00000468963 PDE6BP35913 854 aa19.63■□□□□ 0.73
SDCCAG3-209ENST00000468963 PRELPP51888 382 aa19.63■□□□□ 0.73
SDCCAG3-209ENST00000468963 NFE2L2Q16236 605 aa19.63■□□□□ 0.73
SDCCAG3-209ENST00000468963 NEFMP07197 916 aa19.62■□□□□ 0.73
SDCCAG3-209ENST00000468963 RASSF7Q02833 373 aa19.62■□□□□ 0.73
SDCCAG3-209ENST00000468963 PNISRQ8TF01 805 aaKnown RBP19.61■□□□□ 0.73
SDCCAG3-209ENST00000468963 ZNF622Q969S3 477 aaKnown RBP eCLIP19.61■□□□□ 0.73
SDCCAG3-209ENST00000468963 PNNQ9H307 717 aaKnown RBP19.61■□□□□ 0.73
SDCCAG3-209ENST00000468963 SCN7AQ01118 1682 aa19.61■□□□□ 0.73
SDCCAG3-209ENST00000468963 ANKRD31Q8N7Z5 1873 aa19.6■□□□□ 0.73
SDCCAG3-209ENST00000468963 DLEC1Q9Y238 1755 aa19.6■□□□□ 0.73
SDCCAG3-209ENST00000468963 RGL2O15211 777 aa19.6■□□□□ 0.73
SDCCAG3-209ENST00000468963 LMNB1P20700 586 aa19.6■□□□□ 0.73
SDCCAG3-209ENST00000468963 RALBP1Q15311 655 aa19.6■□□□□ 0.73
SDCCAG3-209ENST00000468963 CNBD1Q8NA66 436 aa19.6■□□□□ 0.73
SDCCAG3-209ENST00000468963 NFKBIEO00221 500 aa19.59■□□□□ 0.73
SDCCAG3-209ENST00000468963 EIF4A1P60842 406 aaKnown RBP19.59■□□□□ 0.73
SDCCAG3-209ENST00000468963 THUMPD2Q9BTF0 503 aaKnown RBP19.59■□□□□ 0.73
SDCCAG3-209ENST00000468963 DLG5Q8TDM6 1919 aa19.59■□□□□ 0.73
SDCCAG3-209ENST00000468963 KDM2BQ8NHM5 1336 aa19.58■□□□□ 0.73
SDCCAG3-209ENST00000468963 SRGNP10124 158 aa19.58■□□□□ 0.72
SDCCAG3-209ENST00000468963 RRAGCQ9HB90 399 aa19.58■□□□□ 0.72
SDCCAG3-209ENST00000468963 ZC3H4Q9UPT8 1303 aaKnown RBP19.57■□□□□ 0.72
SDCCAG3-209ENST00000468963 C21orf2O43822 256 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms