RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 USP42Q9H9J4 1324 aaKnown RBP17.13■□□□□ 0.33
CLRN1-204ENST00000468836 COL15A1P39059 1388 aa17.13■□□□□ 0.33
CLRN1-204ENST00000468836 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
CLRN1-204ENST00000468836 GYS1P13807 737 aa17.12■□□□□ 0.33
CLRN1-204ENST00000468836 SRP68Q9UHB9 627 aaKnown RBP17.12■□□□□ 0.33
CLRN1-204ENST00000468836 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
CLRN1-204ENST00000468836 RIPK4P57078 832 aa17.11■□□□□ 0.33
CLRN1-204ENST00000468836 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
CLRN1-204ENST00000468836 A0A087WZG4 1122 aa17.1■□□□□ 0.33
CLRN1-204ENST00000468836 KCNQ3O43525 872 aa17.1■□□□□ 0.33
CLRN1-204ENST00000468836 YY1P25490 414 aa17.1■□□□□ 0.33
CLRN1-204ENST00000468836 USPL1Q5W0Q7 1092 aa17.1■□□□□ 0.33
CLRN1-204ENST00000468836 CCDC146Q8IYE0 955 aa17.1■□□□□ 0.33
CLRN1-204ENST00000468836 SNRPA1P09661 255 aaKnown RBP17.09■□□□□ 0.33
CLRN1-204ENST00000468836 RUNDC1Q96C34 613 aa17.09■□□□□ 0.33
CLRN1-204ENST00000468836 UBR2Q8IWV8 1755 aa17.09■□□□□ 0.33
CLRN1-204ENST00000468836 ANP32CO43423 234 aa17.08■□□□□ 0.32
CLRN1-204ENST00000468836 NEUROD2Q15784 382 aa17.08■□□□□ 0.32
CLRN1-204ENST00000468836 THUMPD2Q9BTF0 503 aaKnown RBP17.08■□□□□ 0.32
CLRN1-204ENST00000468836 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
CLRN1-204ENST00000468836 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
CLRN1-204ENST00000468836 FKBP8Q14318 412 aa17.07■□□□□ 0.32
CLRN1-204ENST00000468836 MIS18AQ9NYP9 233 aa17.07■□□□□ 0.32
CLRN1-204ENST00000468836 NARFQ9UHQ1 456 aa17.07■□□□□ 0.32
CLRN1-204ENST00000468836 RRP7AQ9Y3A4 280 aaKnown RBP17.07■□□□□ 0.32
CLRN1-204ENST00000468836 GRIN3BO60391 1043 aa17.06■□□□□ 0.32
CLRN1-204ENST00000468836 IL6STP40189 918 aaPredicted RBP17.06■□□□□ 0.32
CLRN1-204ENST00000468836 TSPYL4Q9UJ04 414 aa17.06■□□□□ 0.32
CLRN1-204ENST00000468836 ADAMTS8Q9UP79 889 aa17.06■□□□□ 0.32
CLRN1-204ENST00000468836 C4AP0C0L4 1744 aa17.06■□□□□ 0.32
CLRN1-204ENST00000468836 A1BGP04217 495 aa17.05■□□□□ 0.32
CLRN1-204ENST00000468836 EIF5P55010 431 aaKnown RBP17.04■□□□□ 0.32
CLRN1-204ENST00000468836 WWC3Q9ULE0 1092 aa17.04■□□□□ 0.32
CLRN1-204ENST00000468836 USP16Q9Y5T5 823 aa17.04■□□□□ 0.32
CLRN1-204ENST00000468836 MYH14Q7Z406 1995 aaKnown RBP17.04■□□□□ 0.32
CLRN1-204ENST00000468836 PRAMEF22A3QJZ6 481 aa17.03■□□□□ 0.32
CLRN1-204ENST00000468836 NPHP1O15259 732 aa17.03■□□□□ 0.32
CLRN1-204ENST00000468836 BICDL1Q6ZP65 573 aa17.03■□□□□ 0.32
CLRN1-204ENST00000468836 TBC1D2BQ9UPU7 963 aa17.03■□□□□ 0.32
CLRN1-204ENST00000468836 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
CLRN1-204ENST00000468836 TGFB2P61812 414 aa17.02■□□□□ 0.32
CLRN1-204ENST00000468836 DZIP3Q86Y13 1208 aaKnown RBP17.02■□□□□ 0.32
CLRN1-204ENST00000468836 POLRMTO00411 1230 aaKnown RBP17.01■□□□□ 0.31
CLRN1-204ENST00000468836 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
CLRN1-204ENST00000468836 DDR1Q08345 913 aa17.01■□□□□ 0.31
CLRN1-204ENST00000468836 NFIXQ14938 502 aa17.01■□□□□ 0.31
CLRN1-204ENST00000468836 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
CLRN1-204ENST00000468836 YBX3P16989 372 aaKnown RBP eCLIP17■□□□□ 0.31
CLRN1-204ENST00000468836 EIF4A1P60842 406 aaKnown RBP17■□□□□ 0.31
CLRN1-204ENST00000468836 ZNF652Q9Y2D9 606 aa17■□□□□ 0.31
CLRN1-204ENST00000468836 TM4SF1P30408 202 aa16.99■□□□□ 0.31
CLRN1-204ENST00000468836 MRS2Q9HD23 443 aa16.99■□□□□ 0.31
CLRN1-204ENST00000468836 BABAM1Q9NWV8 329 aa16.99■□□□□ 0.31
CLRN1-204ENST00000468836 PXDNLA1KZ92 1463 aa16.99■□□□□ 0.31
CLRN1-204ENST00000468836 A0A0G2JLW4 131 aa16.98■□□□□ 0.31
CLRN1-204ENST00000468836 GIGYF1O75420 1035 aaPredicted RBP16.98■□□□□ 0.31
CLRN1-204ENST00000468836 SERPINB2P05120 415 aa16.98■□□□□ 0.31
CLRN1-204ENST00000468836 BCL2L12Q9HB09 334 aa16.98■□□□□ 0.31
CLRN1-204ENST00000468836 BCS1LQ9Y276 419 aa16.98■□□□□ 0.31
CLRN1-204ENST00000468836 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
CLRN1-204ENST00000468836 DPEP1P16444 411 aa16.97■□□□□ 0.31
CLRN1-204ENST00000468836 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
CLRN1-204ENST00000468836 NGEFQ8N5V2 710 aa16.97■□□□□ 0.31
CLRN1-204ENST00000468836 SETDB2Q96T68 719 aa16.97■□□□□ 0.31
CLRN1-204ENST00000468836 CARMIL3Q8ND23 1372 aa16.97■□□□□ 0.31
CLRN1-204ENST00000468836 APAF1O14727 1248 aa16.96■□□□□ 0.31
CLRN1-204ENST00000468836 CAMTA2O94983 1202 aa16.96■□□□□ 0.31
CLRN1-204ENST00000468836 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
CLRN1-204ENST00000468836 KIF6Q6ZMV9 814 aa16.96■□□□□ 0.31
CLRN1-204ENST00000468836 MYL6BP14649 208 aa16.95■□□□□ 0.3
CLRN1-204ENST00000468836 EIF2S2P20042 333 aaKnown RBP16.95■□□□□ 0.3
CLRN1-204ENST00000468836 TRIM35Q9UPQ4 493 aa16.95■□□□□ 0.3
CLRN1-204ENST00000468836 KDM3BQ7LBC6 1761 aa16.94■□□□□ 0.3
CLRN1-204ENST00000468836 SCN7AQ01118 1682 aa16.94■□□□□ 0.3
CLRN1-204ENST00000468836 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
CLRN1-204ENST00000468836 ST5P78524 1137 aa16.94■□□□□ 0.3
CLRN1-204ENST00000468836 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
CLRN1-204ENST00000468836 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
CLRN1-204ENST00000468836 PIM2Q9P1W9 311 aa16.94■□□□□ 0.3
CLRN1-204ENST00000468836 ERBB4Q15303 1308 aa16.94■□□□□ 0.3
CLRN1-204ENST00000468836 LAMB4A4D0S4 1761 aa16.93■□□□□ 0.3
CLRN1-204ENST00000468836 CLEC4GQ6UXB4 293 aa16.93■□□□□ 0.3
CLRN1-204ENST00000468836 CNBD1Q8NA66 436 aa16.93■□□□□ 0.3
CLRN1-204ENST00000468836 CHRNA5P30532 468 aa16.92■□□□□ 0.3
CLRN1-204ENST00000468836 CCDC184Q52MB2 194 aa16.92■□□□□ 0.3
CLRN1-204ENST00000468836 DALRD3Q5D0E6 543 aaKnown RBP16.92■□□□□ 0.3
CLRN1-204ENST00000468836 H0YIN7 160 aa16.91■□□□□ 0.3
CLRN1-204ENST00000468836 CHL1O00533 1208 aa16.91■□□□□ 0.3
CLRN1-204ENST00000468836 NBPF5PQ86XG9 351 aaPredicted RBP16.91■□□□□ 0.3
CLRN1-204ENST00000468836 CFAP44Q96MT7 982 aa16.91■□□□□ 0.3
CLRN1-204ENST00000468836 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
CLRN1-204ENST00000468836 RGL2O15211 777 aa16.9■□□□□ 0.3
CLRN1-204ENST00000468836 PDE6BP35913 854 aa16.9■□□□□ 0.3
CLRN1-204ENST00000468836 GNAI1P63096 354 aa16.9■□□□□ 0.3
CLRN1-204ENST00000468836 ARHGAP27Q6ZUM4 889 aa16.9■□□□□ 0.3
CLRN1-204ENST00000468836 C2CD5Q86YS7 1000 aa16.9■□□□□ 0.3
CLRN1-204ENST00000468836 NECTIN2Q92692 538 aa16.9■□□□□ 0.3
CLRN1-204ENST00000468836 KIF13BQ9NQT8 1826 aa16.9■□□□□ 0.3
CLRN1-204ENST00000468836 GTF2E1P29083 439 aaPredicted RBP16.89■□□□□ 0.29
CLRN1-204ENST00000468836 PRR5LQ6MZQ0 368 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms