RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
MSH5-214ENST00000468602 SF3B2Q13435 895 aaKnown RBP14.54□□□□□ -0.08
MSH5-214ENST00000468602 PDIA6Q15084 440 aa14.54□□□□□ -0.08
MSH5-214ENST00000468602 LRP10Q7Z4F1 713 aa14.54□□□□□ -0.08
MSH5-214ENST00000468602 LRRC4BQ9NT99 713 aa14.54□□□□□ -0.08
MSH5-214ENST00000468602 CCNL1Q9UK58 526 aaPredicted RBP14.54□□□□□ -0.08
MSH5-214ENST00000468602 USP16Q9Y5T5 823 aa14.54□□□□□ -0.08
MSH5-214ENST00000468602 MYH14Q7Z406 1995 aaKnown RBP14.54□□□□□ -0.08
MSH5-214ENST00000468602 KRT24Q2M2I5 525 aa14.53□□□□□ -0.08
MSH5-214ENST00000468602 CCDC30Q5VVM6 783 aa14.53□□□□□ -0.08
MSH5-214ENST00000468602 RBM42Q9BTD8 480 aaKnown RBP14.53□□□□□ -0.08
MSH5-214ENST00000468602 C4BP0C0L5 1744 aa14.52□□□□□ -0.08
MSH5-214ENST00000468602 QSER1Q2KHR3 1735 aa14.52□□□□□ -0.08
MSH5-214ENST00000468602 DNAJC10Q8IXB1 793 aa14.52□□□□□ -0.09
MSH5-214ENST00000468602 YTHDC1Q96MU7 727 aaKnown RBP14.52□□□□□ -0.09
MSH5-214ENST00000468602 DDX21Q9NR30 783 aaKnown RBP eCLIP14.52□□□□□ -0.09
MSH5-214ENST00000468602 IL6STP40189 918 aaPredicted RBP14.51□□□□□ -0.09
MSH5-214ENST00000468602 INTS5Q6P9B9 1019 aaKnown RBP14.51□□□□□ -0.09
MSH5-214ENST00000468602 DBF4Q9UBU7 674 aaPredicted RBP14.51□□□□□ -0.09
MSH5-214ENST00000468602 NUP188Q5SRE5 1749 aa14.51□□□□□ -0.09
MSH5-214ENST00000468602 PRAMEF22A3QJZ6 481 aa14.5□□□□□ -0.09
MSH5-214ENST00000468602 RARSP54136 660 aaKnown RBP14.5□□□□□ -0.09
MSH5-214ENST00000468602 HDGFL1Q5TGJ6 251 aa14.5□□□□□ -0.09
MSH5-214ENST00000468602 LINC00116Q8NCU8 138 aa14.5□□□□□ -0.09
MSH5-214ENST00000468602 AKT1S1Q96B36 256 aa14.5□□□□□ -0.09
MSH5-214ENST00000468602 CCDC87Q9NVE4 849 aa14.5□□□□□ -0.09
MSH5-214ENST00000468602 LRP5O75197 1615 aa14.5□□□□□ -0.09
MSH5-214ENST00000468602 IBTKQ9P2D0 1353 aaPredicted RBP14.49□□□□□ -0.09
MSH5-214ENST00000468602 UBR3Q6ZT12 1888 aa14.49□□□□□ -0.09
MSH5-214ENST00000468602 NBPF26B4DH59 902 aa14.49□□□□□ -0.09
MSH5-214ENST00000468602 RPS6KA4O75676 772 aa14.49□□□□□ -0.09
MSH5-214ENST00000468602 ADRA2BP18089 450 aa14.49□□□□□ -0.09
MSH5-214ENST00000468602 CRKLP46109 303 aaKnown RBP14.49□□□□□ -0.09
MSH5-214ENST00000468602 EIF5P55010 431 aaKnown RBP14.49□□□□□ -0.09
MSH5-214ENST00000468602 EN1Q05925 392 aaPredicted RBP14.49□□□□□ -0.09
MSH5-214ENST00000468602 EZH2Q15910 746 aaKnown RBP14.49□□□□□ -0.09
MSH5-214ENST00000468602 NBPF14Q5TI25 921 aa14.49□□□□□ -0.09
MSH5-214ENST00000468602 NBPF10Q6P3W6 841 aaKnown RBP14.49□□□□□ -0.09
MSH5-214ENST00000468602 NBPF15Q8N660 670 aa14.49□□□□□ -0.09
MSH5-214ENST00000468602 HYPKQ9NX55 129 aa14.49□□□□□ -0.09
MSH5-214ENST00000468602 ARHGAP45Q92619 1136 aa14.48□□□□□ -0.09
MSH5-214ENST00000468602 SSFA2P28290 1259 aa14.47□□□□□ -0.09
MSH5-214ENST00000468602 MRPL50Q8N5N7 158 aaKnown RBP14.47□□□□□ -0.09
MSH5-214ENST00000468602 FLAD1Q8NFF5 587 aa14.47□□□□□ -0.09
MSH5-214ENST00000468602 SSH1Q8WYL5 1049 aa14.47□□□□□ -0.09
MSH5-214ENST00000468602 RNF123Q5XPI4 1314 aa14.46□□□□□ -0.09
MSH5-214ENST00000468602 ELL2O00472 640 aaPredicted RBP14.46□□□□□ -0.09
MSH5-214ENST00000468602 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.09
MSH5-214ENST00000468602 STK31Q9BXU1 1019 aa14.46□□□□□ -0.09
MSH5-214ENST00000468602 ZBTB1Q9Y2K1 713 aa14.46□□□□□ -0.09
MSH5-214ENST00000468602 PTPRCP08575 1304 aa14.45□□□□□ -0.1
MSH5-214ENST00000468602 KIF16BQ96L93 1317 aa14.45□□□□□ -0.1
MSH5-214ENST00000468602 A0A087WZG4 1122 aa14.45□□□□□ -0.1
MSH5-214ENST00000468602 A1BGP04217 495 aa14.45□□□□□ -0.1
MSH5-214ENST00000468602 CHPF2Q9P2E5 772 aa14.45□□□□□ -0.1
MSH5-214ENST00000468602 RCAN3Q9UKA8 241 aa14.45□□□□□ -0.1
MSH5-214ENST00000468602 ERVV-1B6SEH8 477 aa14.44□□□□□ -0.1
MSH5-214ENST00000468602 SLC4A2P04920 1241 aa14.44□□□□□ -0.1
MSH5-214ENST00000468602 EIF2S2P20042 333 aaKnown RBP14.44□□□□□ -0.1
MSH5-214ENST00000468602 SLC15A2Q16348 729 aa14.44□□□□□ -0.1
MSH5-214ENST00000468602 CLEC4GQ6UXB4 293 aa14.43□□□□□ -0.1
MSH5-214ENST00000468602 RTCBQ9Y3I0 505 aaKnown RBP14.43□□□□□ -0.1
MSH5-214ENST00000468602 COL15A1P39059 1388 aa14.43□□□□□ -0.1
MSH5-214ENST00000468602 KCNQ4P56696 695 aa14.42□□□□□ -0.1
MSH5-214ENST00000468602 FLIIQ13045 1269 aa14.42□□□□□ -0.1
MSH5-214ENST00000468602 PROSER3Q2NL68 480 aa14.42□□□□□ -0.1
MSH5-214ENST00000468602 AK7Q96M32 723 aa14.42□□□□□ -0.1
MSH5-214ENST00000468602 TUBGCP6Q96RT7 1819 aa14.42□□□□□ -0.1
MSH5-214ENST00000468602 BCORQ6W2J9 1755 aa14.42□□□□□ -0.1
MSH5-214ENST00000468602 YY1P25490 414 aa14.41□□□□□ -0.1
MSH5-214ENST00000468602 ZNF827Q17R98 1081 aa14.41□□□□□ -0.1
MSH5-214ENST00000468602 ANO8Q9HCE9 1232 aaPredicted RBP14.41□□□□□ -0.1
MSH5-214ENST00000468602 SMC4Q9NTJ3 1288 aa14.41□□□□□ -0.1
MSH5-214ENST00000468602 NARFQ9UHQ1 456 aa14.41□□□□□ -0.1
MSH5-214ENST00000468602 PXDNLA1KZ92 1463 aa14.41□□□□□ -0.1
MSH5-214ENST00000468602 C4AP0C0L4 1744 aa14.41□□□□□ -0.1
MSH5-214ENST00000468602 COL24A1Q17RW2 1714 aa14.41□□□□□ -0.1
MSH5-214ENST00000468602 SCN7AQ01118 1682 aa14.4□□□□□ -0.1
MSH5-214ENST00000468602 GNPATO15228 680 aa14.4□□□□□ -0.1
MSH5-214ENST00000468602 IPO8O15397 1037 aaKnown RBP14.4□□□□□ -0.1
MSH5-214ENST00000468602 TRIM28Q13263 835 aaKnown RBP14.4□□□□□ -0.1
MSH5-214ENST00000468602 KSR2Q6VAB6 950 aa14.4□□□□□ -0.1
MSH5-214ENST00000468602 PLBD2Q8NHP8 589 aa14.4□□□□□ -0.1
MSH5-214ENST00000468602 STK32BQ9NY57 414 aa14.4□□□□□ -0.1
MSH5-214ENST00000468602 MAP3K15Q6ZN16 1313 aa14.4□□□□□ -0.1
MSH5-214ENST00000468602 PNPLA7Q6ZV29 1317 aa14.4□□□□□ -0.1
MSH5-214ENST00000468602 N4BP2Q86UW6 1770 aaPredicted RBP14.39□□□□□ -0.11
MSH5-214ENST00000468602 BCAR3O75815 825 aa14.39□□□□□ -0.11
MSH5-214ENST00000468602 CAMTA2O94983 1202 aa14.39□□□□□ -0.11
MSH5-214ENST00000468602 DDX58O95786 925 aaKnown RBP14.39□□□□□ -0.11
MSH5-214ENST00000468602 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
MSH5-214ENST00000468602 TRAPPC3LQ5T215 181 aa14.39□□□□□ -0.11
MSH5-214ENST00000468602 COPS6Q7L5N1 327 aa14.39□□□□□ -0.11
MSH5-214ENST00000468602 AMIGO3Q86WK7 504 aa14.39□□□□□ -0.11
MSH5-214ENST00000468602 SLC16A10Q8TF71 515 aa14.39□□□□□ -0.11
MSH5-214ENST00000468602 ARHGEF1Q92888 912 aaKnown RBP14.39□□□□□ -0.11
MSH5-214ENST00000468602 PHAXQ9H814 394 aaKnown RBP14.39□□□□□ -0.11
MSH5-214ENST00000468602 ATP10DQ9P241 1426 aa14.39□□□□□ -0.11
MSH5-214ENST00000468602 USP42Q9H9J4 1324 aaKnown RBP14.39□□□□□ -0.11
MSH5-214ENST00000468602 ADCY9O60503 1353 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms