RNA–Protein interactions for RNA: ENST00000468544.1

NPM3-203, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 5

Gene NPM3, Length 393 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-203ENST00000468544 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
NPM3-203ENST00000468544 TJP1Q07157 1748 aa13.19□□□□□ -0.3
NPM3-203ENST00000468544 NBPF26B4DH59 902 aa13.19□□□□□ -0.3
NPM3-203ENST00000468544 VAMP4O75379 141 aa13.19□□□□□ -0.3
NPM3-203ENST00000468544 STARD3NLO95772 234 aa13.19□□□□□ -0.3
NPM3-203ENST00000468544 TWISTNBQ3B726 338 aaPredicted RBP13.19□□□□□ -0.3
NPM3-203ENST00000468544 RC3H1Q5TC82 1133 aaKnown RBP13.19□□□□□ -0.3
NPM3-203ENST00000468544 NBPF14Q5TI25 921 aa13.19□□□□□ -0.3
NPM3-203ENST00000468544 NBPF10Q6P3W6 841 aaKnown RBP13.19□□□□□ -0.3
NPM3-203ENST00000468544 NBPF15Q8N660 670 aa13.19□□□□□ -0.3
NPM3-203ENST00000468544 ZBTB1Q9Y2K1 713 aa13.19□□□□□ -0.3
NPM3-203ENST00000468544 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
NPM3-203ENST00000468544 RREB1Q92766 1687 aa13.18□□□□□ -0.3
NPM3-203ENST00000468544 CNTNAP4Q9C0A0 1308 aa13.18□□□□□ -0.3
NPM3-203ENST00000468544 MYH14Q7Z406 1995 aaKnown RBP13.18□□□□□ -0.3
NPM3-203ENST00000468544 HOXB7P09629 217 aa13.18□□□□□ -0.3
NPM3-203ENST00000468544 PROSER3Q2NL68 480 aa13.18□□□□□ -0.3
NPM3-203ENST00000468544 CCDC87Q9NVE4 849 aa13.18□□□□□ -0.3
NPM3-203ENST00000468544 C5P01031 1676 aa13.18□□□□□ -0.3
NPM3-203ENST00000468544 NUP188Q5SRE5 1749 aa13.17□□□□□ -0.3
NPM3-203ENST00000468544 TCERG1O14776 1098 aaKnown RBP13.17□□□□□ -0.3
NPM3-203ENST00000468544 ANXA1P04083 346 aa13.17□□□□□ -0.3
NPM3-203ENST00000468544 CANXP27824 592 aaKnown RBP13.17□□□□□ -0.3
NPM3-203ENST00000468544 PDIA6Q15084 440 aa13.17□□□□□ -0.3
NPM3-203ENST00000468544 SLC15A2Q16348 729 aa13.17□□□□□ -0.3
NPM3-203ENST00000468544 HDGFL1Q5TGJ6 251 aa13.17□□□□□ -0.3
NPM3-203ENST00000468544 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
NPM3-203ENST00000468544 GNPATO15228 680 aa13.16□□□□□ -0.3
NPM3-203ENST00000468544 RPS6KA4O75676 772 aa13.16□□□□□ -0.3
NPM3-203ENST00000468544 LRP10Q7Z4F1 713 aa13.16□□□□□ -0.3
NPM3-203ENST00000468544 AK7Q96M32 723 aa13.16□□□□□ -0.3
NPM3-203ENST00000468544 PDGFDQ9GZP0 370 aaPredicted RBP13.16□□□□□ -0.3
NPM3-203ENST00000468544 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
NPM3-203ENST00000468544 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
NPM3-203ENST00000468544 C4BP0C0L5 1744 aa13.16□□□□□ -0.3
NPM3-203ENST00000468544 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
NPM3-203ENST00000468544 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
NPM3-203ENST00000468544 STK32BQ9NY57 414 aa13.15□□□□□ -0.3
NPM3-203ENST00000468544 CHPF2Q9P2E5 772 aa13.15□□□□□ -0.3
NPM3-203ENST00000468544 SOS1Q07889 1333 aaPredicted RBP13.14□□□□□ -0.31
NPM3-203ENST00000468544 PHF14O94880 888 aa13.14□□□□□ -0.31
NPM3-203ENST00000468544 MYL6BP14649 208 aa13.14□□□□□ -0.31
NPM3-203ENST00000468544 COL23A1Q86Y22 540 aaPredicted RBP13.14□□□□□ -0.31
NPM3-203ENST00000468544 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
NPM3-203ENST00000468544 PNPLA7Q6ZV29 1317 aa13.13□□□□□ -0.31
NPM3-203ENST00000468544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.13□□□□□ -0.31
NPM3-203ENST00000468544 IL6STP40189 918 aaPredicted RBP13.13□□□□□ -0.31
NPM3-203ENST00000468544 R3HDM1Q15032 1099 aaKnown RBP13.13□□□□□ -0.31
NPM3-203ENST00000468544 CCDC30Q5VVM6 783 aa13.13□□□□□ -0.31
NPM3-203ENST00000468544 ARHGEF1Q92888 912 aaKnown RBP13.13□□□□□ -0.31
NPM3-203ENST00000468544 DDX21Q9NR30 783 aaKnown RBP eCLIP13.13□□□□□ -0.31
NPM3-203ENST00000468544 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
NPM3-203ENST00000468544 PSDA5PKW4 1024 aaPredicted RBP13.12□□□□□ -0.31
NPM3-203ENST00000468544 HMGB2P26583 209 aaKnown RBP13.12□□□□□ -0.31
NPM3-203ENST00000468544 SSFA2P28290 1259 aa13.12□□□□□ -0.31
NPM3-203ENST00000468544 TRAPPC3LQ5T215 181 aa13.12□□□□□ -0.31
NPM3-203ENST00000468544 G2E3Q7L622 706 aa13.12□□□□□ -0.31
NPM3-203ENST00000468544 DBF4Q9UBU7 674 aaPredicted RBP13.12□□□□□ -0.31
NPM3-203ENST00000468544 ERBB4Q15303 1308 aa13.12□□□□□ -0.31
NPM3-203ENST00000468544 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
NPM3-203ENST00000468544 TTLL7Q6ZT98 887 aa13.11□□□□□ -0.31
NPM3-203ENST00000468544 SSH1Q8WYL5 1049 aa13.11□□□□□ -0.31
NPM3-203ENST00000468544 PHAXQ9H814 394 aaKnown RBP13.11□□□□□ -0.31
NPM3-203ENST00000468544 TBC1D2BQ9UPU7 963 aa13.11□□□□□ -0.31
NPM3-203ENST00000468544 UBR3Q6ZT12 1888 aa13.1□□□□□ -0.31
NPM3-203ENST00000468544 COL15A1P39059 1388 aa13.1□□□□□ -0.31
NPM3-203ENST00000468544 LAMB4A4D0S4 1761 aa13.1□□□□□ -0.31
NPM3-203ENST00000468544 CT47B1P0C2W7 299 aaPredicted RBP13.1□□□□□ -0.31
NPM3-203ENST00000468544 COPS6Q7L5N1 327 aa13.1□□□□□ -0.31
NPM3-203ENST00000468544 XAGE3Q8WTP9 111 aa13.1□□□□□ -0.31
NPM3-203ENST00000468544 BCL2L13Q9BXK5 485 aa13.1□□□□□ -0.31
NPM3-203ENST00000468544 SRP68Q9UHB9 627 aaKnown RBP13.1□□□□□ -0.31
NPM3-203ENST00000468544 ADRA2BP18089 450 aa13.09□□□□□ -0.31
NPM3-203ENST00000468544 RARSP54136 660 aaKnown RBP13.09□□□□□ -0.31
NPM3-203ENST00000468544 AIMP1Q12904 312 aaKnown RBP13.09□□□□□ -0.31
NPM3-203ENST00000468544 MRPL50Q8N5N7 158 aaKnown RBP13.09□□□□□ -0.31
NPM3-203ENST00000468544 ARXQ96QS3 562 aa13.09□□□□□ -0.31
NPM3-203ENST00000468544 STK31Q9BXU1 1019 aa13.09□□□□□ -0.31
NPM3-203ENST00000468544 HYPKQ9NX55 129 aa13.09□□□□□ -0.31
NPM3-203ENST00000468544 TUBGCP6Q96RT7 1819 aa13.09□□□□□ -0.31
NPM3-203ENST00000468544 MSH5O43196 834 aa13.08□□□□□ -0.32
NPM3-203ENST00000468544 BCAR3O75815 825 aa13.08□□□□□ -0.32
NPM3-203ENST00000468544 CAMTA2O94983 1202 aa13.08□□□□□ -0.32
NPM3-203ENST00000468544 RFC4P35249 363 aa13.08□□□□□ -0.32
NPM3-203ENST00000468544 DZIP3Q86Y13 1208 aaKnown RBP13.08□□□□□ -0.32
NPM3-203ENST00000468544 ZNF428Q96B54 188 aa13.08□□□□□ -0.32
NPM3-203ENST00000468544 BCL2L12Q9HB09 334 aa13.08□□□□□ -0.32
NPM3-203ENST00000468544 NARFQ9UHQ1 456 aa13.08□□□□□ -0.32
NPM3-203ENST00000468544 HLFQ16534 295 aa13.07□□□□□ -0.32
NPM3-203ENST00000468544 ALDH1L2Q3SY69 923 aa13.07□□□□□ -0.32
NPM3-203ENST00000468544 USPL1Q5W0Q7 1092 aa13.07□□□□□ -0.32
NPM3-203ENST00000468544 FLAD1Q8NFF5 587 aa13.07□□□□□ -0.32
NPM3-203ENST00000468544 CHMP4AQ9BY43 222 aa13.07□□□□□ -0.32
NPM3-203ENST00000468544 USP42Q9H9J4 1324 aaKnown RBP13.07□□□□□ -0.32
NPM3-203ENST00000468544 A0A087WZG4 1122 aa13.06□□□□□ -0.32
NPM3-203ENST00000468544 GYS1P13807 737 aa13.06□□□□□ -0.32
NPM3-203ENST00000468544 FLIIQ13045 1269 aa13.06□□□□□ -0.32
NPM3-203ENST00000468544 FKBP8Q14318 412 aa13.06□□□□□ -0.32
NPM3-203ENST00000468544 ZBTB3Q9H5J0 574 aa13.06□□□□□ -0.32
NPM3-203ENST00000468544 SMC4Q9NTJ3 1288 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms