RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 TTC5Q8N0Z6 440 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 PROM2Q8N271 834 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 NFATC2IPQ8NCF5 419 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 LGR6Q9HBX8 967 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 ASAP1Q9ULH1 1129 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 ADAMTS8Q9UP79 889 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 LRP5O75197 1615 aa4.78□□□□□ -1.64
COMMD3-207ENST00000468469 QSER1Q2KHR3 1735 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 VIRMAQ69YN4 1812 aaKnown RBP4.77□□□□□ -1.65
COMMD3-207ENST00000468469 HMGB2P26583 209 aaKnown RBP4.77□□□□□ -1.65
COMMD3-207ENST00000468469 ATP6V1AP38606 617 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 KCNQ4P56696 695 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 RIPK4P57078 832 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 SLC39A6Q13433 755 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 DCTN1Q14203 1278 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 DIEXFQ68CQ4 756 aaKnown RBP4.77□□□□□ -1.65
COMMD3-207ENST00000468469 IL17REQ8NFR9 667 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 AK7Q96M32 723 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 THUMPD2Q9BTF0 503 aaKnown RBP4.77□□□□□ -1.65
COMMD3-207ENST00000468469 LRRC4BQ9NT99 713 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 RRP7AQ9Y3A4 280 aaKnown RBP4.77□□□□□ -1.65
COMMD3-207ENST00000468469 KDM3BQ7LBC6 1761 aa4.77□□□□□ -1.65
COMMD3-207ENST00000468469 TAF1LQ8IZX4 1826 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 TUBGCP6Q96RT7 1819 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 EP400Q96L91 3159 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 LAMB4A4D0S4 1761 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 DLG5Q8TDM6 1919 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 POTEFA5A3E0 1075 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 BTBD11A6QL63 1104 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 PTCD1O75127 700 aaKnown RBP4.76□□□□□ -1.65
COMMD3-207ENST00000468469 PHF14O94880 888 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 TMPOP42166 694 aaKnown RBP4.76□□□□□ -1.65
COMMD3-207ENST00000468469 ITPK1Q13572 414 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 NEUROD2Q15784 382 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 SLC15A2Q16348 729 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 ZNF790Q6PG37 636 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 LINC00116Q8NCU8 138 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 PNISRQ8TF01 805 aaKnown RBP4.76□□□□□ -1.65
COMMD3-207ENST00000468469 TFCP2L1Q9NZI6 479 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 HEG1Q9ULI3 1381 aa4.76□□□□□ -1.65
COMMD3-207ENST00000468469 PNPLA7Q6ZV29 1317 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 CNTNAP4Q9C0A0 1308 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 CCER2I3L3R5 266 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 APAF1O14727 1248 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 GNPATO15228 680 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 ATN1P54259 1190 aaPredicted RBP4.75□□□□□ -1.65
COMMD3-207ENST00000468469 DNAJC10Q8IXB1 793 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 FAM9BQ8IZU0 186 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 ZNF496Q96IT1 587 aaPredicted RBP4.75□□□□□ -1.65
COMMD3-207ENST00000468469 FMNL2Q96PY5 1086 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 SLC4A9Q96Q91 983 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 SCN7AQ01118 1682 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 C4AP0C0L4 1744 aa4.75□□□□□ -1.65
COMMD3-207ENST00000468469 SENP3-EIF4A1A0A087X0R7 540 aa4.74□□□□□ -1.65
COMMD3-207ENST00000468469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.74□□□□□ -1.65
COMMD3-207ENST00000468469 KCNQ3O43525 872 aa4.74□□□□□ -1.65
COMMD3-207ENST00000468469 SSFA2P28290 1259 aa4.74□□□□□ -1.65
COMMD3-207ENST00000468469 CRKLP46109 303 aaKnown RBP4.74□□□□□ -1.65
COMMD3-207ENST00000468469 MNX1P50219 401 aaPredicted RBP4.74□□□□□ -1.65
COMMD3-207ENST00000468469 CALD1Q05682 793 aaKnown RBP4.74□□□□□ -1.65
COMMD3-207ENST00000468469 TAF7Q15545 349 aaPredicted RBP4.74□□□□□ -1.65
COMMD3-207ENST00000468469 VSIG10Q8N0Z9 540 aa4.74□□□□□ -1.65
COMMD3-207ENST00000468469 PDGFDQ9GZP0 370 aaPredicted RBP4.74□□□□□ -1.65
COMMD3-207ENST00000468469 TSPYL4Q9UJ04 414 aa4.74□□□□□ -1.65
COMMD3-207ENST00000468469 TRIM35Q9UPQ4 493 aa4.74□□□□□ -1.65
COMMD3-207ENST00000468469 RTCBQ9Y3I0 505 aaKnown RBP4.74□□□□□ -1.65
COMMD3-207ENST00000468469 UBR3Q6ZT12 1888 aa4.74□□□□□ -1.65
COMMD3-207ENST00000468469 COL15A1P39059 1388 aa4.74□□□□□ -1.65
COMMD3-207ENST00000468469 ZBTB7AO95365 584 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 STARD3NLO95772 234 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 CYP19A1P11511 503 aaPredicted RBP4.73□□□□□ -1.65
COMMD3-207ENST00000468469 RC3H1Q5TC82 1133 aaKnown RBP4.73□□□□□ -1.65
COMMD3-207ENST00000468469 AMIGO3Q86WK7 504 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 COL23A1Q86Y22 540 aaPredicted RBP4.73□□□□□ -1.65
COMMD3-207ENST00000468469 MIER1Q8N108 512 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 FLAD1Q8NFF5 587 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 TEX13AQ9BXU3 409 aaPredicted RBP4.73□□□□□ -1.65
COMMD3-207ENST00000468469 MTFR1LQ9H019 292 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 SPON1Q9HCB6 807 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 CCDC87Q9NVE4 849 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 IFT57Q9NWB7 429 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 BABAM1Q9NWV8 329 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 MIS18AQ9NYP9 233 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 ZBTB1Q9Y2K1 713 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 LAS1LQ9Y4W2 734 aaKnown RBP4.73□□□□□ -1.65
COMMD3-207ENST00000468469 BCORQ6W2J9 1755 aa4.73□□□□□ -1.65
COMMD3-207ENST00000468469 SOS1Q07889 1333 aaPredicted RBP4.72□□□□□ -1.65
COMMD3-207ENST00000468469 USP42Q9H9J4 1324 aaKnown RBP4.72□□□□□ -1.65
COMMD3-207ENST00000468469 PRAMEF22A3QJZ6 481 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 RPS6KA4O75676 772 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 SNRPA1P09661 255 aaKnown RBP4.72□□□□□ -1.65
COMMD3-207ENST00000468469 EIF4A1P60842 406 aaKnown RBP4.72□□□□□ -1.65
COMMD3-207ENST00000468469 MMRN1Q13201 1228 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 CCDC27Q2M243 656 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 MSL1Q68DK7 614 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 INTS5Q6P9B9 1019 aaKnown RBP4.72□□□□□ -1.65
COMMD3-207ENST00000468469 SMIM5Q71RC9 77 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 WWC1Q8IX03 1113 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 SLC16A10Q8TF71 515 aa4.72□□□□□ -1.65
COMMD3-207ENST00000468469 CFAP44Q96MT7 982 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms