RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 PI4KAP2A4QPH2 592 aa12.68□□□□□ -0.38
MSH5-213ENST00000468136 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
MSH5-213ENST00000468136 HSP90AB4PQ58FF6 505 aa12.68□□□□□ -0.38
MSH5-213ENST00000468136 BMP2KLQ5H9B9 411 aa12.68□□□□□ -0.38
MSH5-213ENST00000468136 BEND3Q5T5X7 828 aa12.68□□□□□ -0.38
MSH5-213ENST00000468136 PI4KAP1Q8N8J0 262 aa12.68□□□□□ -0.38
MSH5-213ENST00000468136 LINS1Q8NG48 757 aa12.68□□□□□ -0.38
MSH5-213ENST00000468136 LRP6O75581 1613 aa12.68□□□□□ -0.38
MSH5-213ENST00000468136 EXOC5O00471 708 aa12.67□□□□□ -0.38
MSH5-213ENST00000468136 RAB11FIP3O75154 756 aa12.67□□□□□ -0.38
MSH5-213ENST00000468136 NECTIN2Q92692 538 aa12.67□□□□□ -0.38
MSH5-213ENST00000468136 ZNF496Q96IT1 587 aaPredicted RBP12.67□□□□□ -0.38
MSH5-213ENST00000468136 USP44Q9H0E7 712 aa12.67□□□□□ -0.38
MSH5-213ENST00000468136 C1orf115Q9H7X2 142 aa12.67□□□□□ -0.38
MSH5-213ENST00000468136 PHAXQ9H814 394 aaKnown RBP12.67□□□□□ -0.38
MSH5-213ENST00000468136 TNS2Q63HR2 1409 aa12.66□□□□□ -0.38
MSH5-213ENST00000468136 IPO9Q96P70 1041 aaKnown RBP12.66□□□□□ -0.38
MSH5-213ENST00000468136 TMOD3Q9NYL9 352 aa12.66□□□□□ -0.38
MSH5-213ENST00000468136 JCADQ9P266 1359 aa12.66□□□□□ -0.38
MSH5-213ENST00000468136 NWD2Q9ULI1 1742 aa12.65□□□□□ -0.38
MSH5-213ENST00000468136 UTYO14607 1347 aa12.65□□□□□ -0.38
MSH5-213ENST00000468136 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
MSH5-213ENST00000468136 MTX1Q13505 466 aa12.65□□□□□ -0.38
MSH5-213ENST00000468136 PDIA6Q15084 440 aa12.65□□□□□ -0.38
MSH5-213ENST00000468136 BARGINQ6ZT62 677 aa12.65□□□□□ -0.38
MSH5-213ENST00000468136 DDX54Q8TDD1 881 aaKnown RBP12.65□□□□□ -0.38
MSH5-213ENST00000468136 LNPKQ9C0E8 428 aa12.65□□□□□ -0.38
MSH5-213ENST00000468136 ADCY9O60503 1353 aa12.65□□□□□ -0.38
MSH5-213ENST00000468136 UBAP1LF5GYI3 381 aa12.64□□□□□ -0.39
MSH5-213ENST00000468136 RIC3Q7Z5B4 369 aa12.64□□□□□ -0.39
MSH5-213ENST00000468136 SSH3Q8TE77 659 aa12.64□□□□□ -0.39
MSH5-213ENST00000468136 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
MSH5-213ENST00000468136 COL15A1P39059 1388 aa12.64□□□□□ -0.39
MSH5-213ENST00000468136 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
MSH5-213ENST00000468136 SPATA31A1Q5TZJ5 1347 aa12.63□□□□□ -0.39
MSH5-213ENST00000468136 SPATA31A6Q5VVP1 1343 aa12.63□□□□□ -0.39
MSH5-213ENST00000468136 METTL22Q9BUU2 404 aaPredicted RBP12.63□□□□□ -0.39
MSH5-213ENST00000468136 OSBPL3Q9H4L5 887 aa12.63□□□□□ -0.39
MSH5-213ENST00000468136 C9orf78Q9NZ63 289 aaPredicted RBP12.63□□□□□ -0.39
MSH5-213ENST00000468136 SLIT2O94813 1529 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 UBR2Q8IWV8 1755 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 POLA2Q14181 598 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 ANKRD13DQ6ZTN6 518 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 ERC1Q8IUD2 1116 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 PLBD2Q8NHP8 589 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 LRRFIP2Q9Y608 721 aaKnown RBP12.62□□□□□ -0.39
MSH5-213ENST00000468136 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 AOX1Q06278 1338 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 SPATA31A5Q5VU36 1347 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 SPATA31A7Q8IWB4 1347 aa12.62□□□□□ -0.39
MSH5-213ENST00000468136 GRM8O00222 908 aa12.61□□□□□ -0.39
MSH5-213ENST00000468136 STARD3NLO95772 234 aa12.61□□□□□ -0.39
MSH5-213ENST00000468136 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
MSH5-213ENST00000468136 LRRCC1Q9C099 1032 aa12.61□□□□□ -0.39
MSH5-213ENST00000468136 USP16Q9Y5T5 823 aa12.61□□□□□ -0.39
MSH5-213ENST00000468136 KCPQ6ZWJ8 1503 aa12.61□□□□□ -0.39
MSH5-213ENST00000468136 PIP4K2BP78356 416 aa12.6□□□□□ -0.39
MSH5-213ENST00000468136 DDB1Q16531 1140 aa12.6□□□□□ -0.39
MSH5-213ENST00000468136 PROSER3Q2NL68 480 aa12.6□□□□□ -0.39
MSH5-213ENST00000468136 CASC1Q6TDU7 716 aa12.6□□□□□ -0.39
MSH5-213ENST00000468136 COPS6Q7L5N1 327 aa12.6□□□□□ -0.39
MSH5-213ENST00000468136 LRP10Q7Z4F1 713 aa12.6□□□□□ -0.39
MSH5-213ENST00000468136 UNC5CLQ8IV45 518 aa12.6□□□□□ -0.39
MSH5-213ENST00000468136 XAGE3Q8WTP9 111 aa12.6□□□□□ -0.39
MSH5-213ENST00000468136 NOP58Q9Y2X3 529 aaKnown RBP12.6□□□□□ -0.39
MSH5-213ENST00000468136 NRAPQ86VF7 1730 aa12.59□□□□□ -0.39
MSH5-213ENST00000468136 PLEKHM2Q8IWE5 1019 aa12.59□□□□□ -0.39
MSH5-213ENST00000468136 KIF1BPQ96EK5 621 aa12.59□□□□□ -0.39
MSH5-213ENST00000468136 USP35Q9P2H5 1018 aa12.59□□□□□ -0.39
MSH5-213ENST00000468136 BCL9O00512 1426 aa12.59□□□□□ -0.39
MSH5-213ENST00000468136 C5P01031 1676 aa12.58□□□□□ -0.4
MSH5-213ENST00000468136 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
MSH5-213ENST00000468136 PRAMEF22A3QJZ6 481 aa12.58□□□□□ -0.4
MSH5-213ENST00000468136 NEURL1BA8MQ27 555 aa12.58□□□□□ -0.4
MSH5-213ENST00000468136 ADAMTS2O95450 1211 aa12.58□□□□□ -0.4
MSH5-213ENST00000468136 ANXA1P04083 346 aa12.58□□□□□ -0.4
MSH5-213ENST00000468136 VPS72Q15906 364 aa12.58□□□□□ -0.4
MSH5-213ENST00000468136 ERICH6Q7L0X2 663 aa12.58□□□□□ -0.4
MSH5-213ENST00000468136 PPP1R42Q7Z4L9 355 aa12.58□□□□□ -0.4
MSH5-213ENST00000468136 GLI3P10071 1580 aa12.57□□□□□ -0.4
MSH5-213ENST00000468136 SRGAP3O43295 1099 aa12.57□□□□□ -0.4
MSH5-213ENST00000468136 CDC45O75419 566 aa12.57□□□□□ -0.4
MSH5-213ENST00000468136 MYL6BP14649 208 aa12.57□□□□□ -0.4
MSH5-213ENST00000468136 AIMP1Q12904 312 aaKnown RBP12.57□□□□□ -0.4
MSH5-213ENST00000468136 GCKRQ14397 625 aa12.57□□□□□ -0.4
MSH5-213ENST00000468136 TTC22Q5TAA0 569 aa12.57□□□□□ -0.4
MSH5-213ENST00000468136 FNBP4Q8N3X1 1017 aaPredicted RBP12.57□□□□□ -0.4
MSH5-213ENST00000468136 IL27Q8NEV9 243 aa12.57□□□□□ -0.4
MSH5-213ENST00000468136 PIGBQ92521 554 aa12.57□□□□□ -0.4
MSH5-213ENST00000468136 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
MSH5-213ENST00000468136 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
MSH5-213ENST00000468136 STAP2Q9UGK3 403 aa12.57□□□□□ -0.4
MSH5-213ENST00000468136 PNMA6EA0A0J9YXQ4 647 aa12.56□□□□□ -0.4
MSH5-213ENST00000468136 NBPF7P0C2Y1 421 aaPredicted RBP12.56□□□□□ -0.4
MSH5-213ENST00000468136 TRIM28Q13263 835 aaKnown RBP12.56□□□□□ -0.4
MSH5-213ENST00000468136 BECN1Q14457 450 aa12.56□□□□□ -0.4
MSH5-213ENST00000468136 HSP90AB3PQ58FF7 597 aa12.56□□□□□ -0.4
MSH5-213ENST00000468136 CCDC191Q8NCU4 936 aa12.56□□□□□ -0.4
MSH5-213ENST00000468136 CERKQ8TCT0 537 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms