RNA–Protein interactions for RNA: ENST00000467465.1

HLA-DOA-203, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-203ENST00000467465 INTS5Q6P9B9 1019 aaKnown RBP12.79□□□□□ -0.36
HLA-DOA-203ENST00000467465 SMIM5Q71RC9 77 aa12.79□□□□□ -0.36
HLA-DOA-203ENST00000467465 PRKRIP1Q9H875 184 aaPredicted RBP12.79□□□□□ -0.36
HLA-DOA-203ENST00000467465 CD2APQ9Y5K6 639 aa12.79□□□□□ -0.36
HLA-DOA-203ENST00000467465 KIF13BQ9NQT8 1826 aa12.78□□□□□ -0.36
HLA-DOA-203ENST00000467465 MCM10Q7L590 875 aa12.78□□□□□ -0.36
HLA-DOA-203ENST00000467465 ZNF526Q8TF50 670 aaPredicted RBP12.78□□□□□ -0.36
HLA-DOA-203ENST00000467465 ZNF496Q96IT1 587 aaPredicted RBP12.78□□□□□ -0.36
HLA-DOA-203ENST00000467465 SOS1Q07889 1333 aaPredicted RBP12.78□□□□□ -0.36
HLA-DOA-203ENST00000467465 KDM3BQ7LBC6 1761 aa12.78□□□□□ -0.36
HLA-DOA-203ENST00000467465 GYS1P13807 737 aa12.77□□□□□ -0.37
HLA-DOA-203ENST00000467465 WDR43Q15061 677 aaKnown RBP eCLIP12.77□□□□□ -0.37
HLA-DOA-203ENST00000467465 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.37
HLA-DOA-203ENST00000467465 USP42Q9H9J4 1324 aaKnown RBP12.77□□□□□ -0.37
HLA-DOA-203ENST00000467465 ATP10DQ9P241 1426 aa12.77□□□□□ -0.37
HLA-DOA-203ENST00000467465 LAMB4A4D0S4 1761 aa12.76□□□□□ -0.37
HLA-DOA-203ENST00000467465 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
HLA-DOA-203ENST00000467465 ZPR1O75312 459 aa12.76□□□□□ -0.37
HLA-DOA-203ENST00000467465 MMP10P09238 476 aa12.76□□□□□ -0.37
HLA-DOA-203ENST00000467465 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
HLA-DOA-203ENST00000467465 TAF7Q15545 349 aaPredicted RBP12.76□□□□□ -0.37
HLA-DOA-203ENST00000467465 COL15A1P39059 1388 aa12.76□□□□□ -0.37
HLA-DOA-203ENST00000467465 DCTN1Q14203 1278 aa12.75□□□□□ -0.37
HLA-DOA-203ENST00000467465 ZBTB1Q9Y2K1 713 aa12.75□□□□□ -0.37
HLA-DOA-203ENST00000467465 PARP3Q9Y6F1 533 aa12.75□□□□□ -0.37
HLA-DOA-203ENST00000467465 A0A087WZG4 1122 aa12.74□□□□□ -0.37
HLA-DOA-203ENST00000467465 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
HLA-DOA-203ENST00000467465 SCN7AQ01118 1682 aa12.73□□□□□ -0.37
HLA-DOA-203ENST00000467465 SNRPA1P09661 255 aaKnown RBP12.73□□□□□ -0.37
HLA-DOA-203ENST00000467465 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
HLA-DOA-203ENST00000467465 SRP68Q9UHB9 627 aaKnown RBP12.73□□□□□ -0.37
HLA-DOA-203ENST00000467465 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
HLA-DOA-203ENST00000467465 C10orf71Q711Q0 1435 aa12.72□□□□□ -0.37
HLA-DOA-203ENST00000467465 KCNQ3O43525 872 aa12.72□□□□□ -0.37
HLA-DOA-203ENST00000467465 IL6STP40189 918 aaPredicted RBP12.72□□□□□ -0.37
HLA-DOA-203ENST00000467465 TMPOP42166 694 aaKnown RBP12.72□□□□□ -0.37
HLA-DOA-203ENST00000467465 EIF5P55010 431 aaKnown RBP12.72□□□□□ -0.37
HLA-DOA-203ENST00000467465 RIPK4P57078 832 aa12.72□□□□□ -0.37
HLA-DOA-203ENST00000467465 RUNDC1Q96C34 613 aa12.72□□□□□ -0.37
HLA-DOA-203ENST00000467465 AFDNP55196 1824 aaKnown RBP12.72□□□□□ -0.37
HLA-DOA-203ENST00000467465 BCORQ6W2J9 1755 aa12.71□□□□□ -0.37
HLA-DOA-203ENST00000467465 N4BP2Q86UW6 1770 aaPredicted RBP12.71□□□□□ -0.37
HLA-DOA-203ENST00000467465 KIAA1551Q9HCM1 1747 aa12.71□□□□□ -0.37
HLA-DOA-203ENST00000467465 TGFB2P61812 414 aa12.71□□□□□ -0.37
HLA-DOA-203ENST00000467465 FKBP8Q14318 412 aa12.71□□□□□ -0.37
HLA-DOA-203ENST00000467465 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
HLA-DOA-203ENST00000467465 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.38
HLA-DOA-203ENST00000467465 BRCA1P38398 1863 aaKnown RBP12.7□□□□□ -0.38
HLA-DOA-203ENST00000467465 BABAM1Q9NWV8 329 aa12.7□□□□□ -0.38
HLA-DOA-203ENST00000467465 KIF3CO14782 793 aa12.69□□□□□ -0.38
HLA-DOA-203ENST00000467465 A1BGP04217 495 aa12.69□□□□□ -0.38
HLA-DOA-203ENST00000467465 TM4SF1P30408 202 aa12.69□□□□□ -0.38
HLA-DOA-203ENST00000467465 APLP1P51693 650 aa12.69□□□□□ -0.38
HLA-DOA-203ENST00000467465 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
HLA-DOA-203ENST00000467465 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
HLA-DOA-203ENST00000467465 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
HLA-DOA-203ENST00000467465 USP16Q9Y5T5 823 aa12.69□□□□□ -0.38
HLA-DOA-203ENST00000467465 CEP350Q5VT06 3117 aa12.68□□□□□ -0.38
HLA-DOA-203ENST00000467465 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
HLA-DOA-203ENST00000467465 ARFGEF1Q9Y6D6 1849 aa12.68□□□□□ -0.38
HLA-DOA-203ENST00000467465 POLRMTO00411 1230 aaKnown RBP12.68□□□□□ -0.38
HLA-DOA-203ENST00000467465 ANP32CO43423 234 aa12.68□□□□□ -0.38
HLA-DOA-203ENST00000467465 CCDC146Q8IYE0 955 aa12.68□□□□□ -0.38
HLA-DOA-203ENST00000467465 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
HLA-DOA-203ENST00000467465 EIF4A1P60842 406 aaKnown RBP12.67□□□□□ -0.38
HLA-DOA-203ENST00000467465 DDR1Q08345 913 aa12.67□□□□□ -0.38
HLA-DOA-203ENST00000467465 NFIXQ14938 502 aa12.67□□□□□ -0.38
HLA-DOA-203ENST00000467465 MIS18AQ9NYP9 233 aa12.67□□□□□ -0.38
HLA-DOA-203ENST00000467465 TSPYL4Q9UJ04 414 aa12.67□□□□□ -0.38
HLA-DOA-203ENST00000467465 GOLGB1Q14789 3259 aaKnown RBP12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 PRAMEF22A3QJZ6 481 aa12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 RGL2O15211 777 aa12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 NEUROD2Q15784 382 aa12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 DZIP3Q86Y13 1208 aaKnown RBP12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 DNAJC5GQ8N7S2 189 aa12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 BCL2L12Q9HB09 334 aa12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 ZNF652Q9Y2D9 606 aa12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 ADCY9O60503 1353 aa12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
HLA-DOA-203ENST00000467465 ERBB4Q15303 1308 aa12.65□□□□□ -0.38
HLA-DOA-203ENST00000467465 TOMM70O94826 608 aa12.65□□□□□ -0.38
HLA-DOA-203ENST00000467465 CLEC4GQ6UXB4 293 aa12.65□□□□□ -0.38
HLA-DOA-203ENST00000467465 TBC1D2BQ9UPU7 963 aa12.65□□□□□ -0.38
HLA-DOA-203ENST00000467465 RRP7AQ9Y3A4 280 aaKnown RBP12.65□□□□□ -0.38
HLA-DOA-203ENST00000467465 CARMIL3Q8ND23 1372 aa12.65□□□□□ -0.38
HLA-DOA-203ENST00000467465 CAMTA2O94983 1202 aa12.64□□□□□ -0.39
HLA-DOA-203ENST00000467465 SERPINB2P05120 415 aa12.64□□□□□ -0.39
HLA-DOA-203ENST00000467465 CALD1Q05682 793 aaKnown RBP12.64□□□□□ -0.39
HLA-DOA-203ENST00000467465 TRIM35Q9UPQ4 493 aa12.64□□□□□ -0.39
HLA-DOA-203ENST00000467465 NUP98P52948 1817 aa12.64□□□□□ -0.39
HLA-DOA-203ENST00000467465 A0A0G2JLW4 131 aa12.63□□□□□ -0.39
HLA-DOA-203ENST00000467465 NBPF26B4DH59 902 aa12.63□□□□□ -0.39
HLA-DOA-203ENST00000467465 DPEP1P16444 411 aa12.63□□□□□ -0.39
HLA-DOA-203ENST00000467465 TBC1D9BQ66K14 1250 aa12.63□□□□□ -0.39
HLA-DOA-203ENST00000467465 NBPF10Q6P3W6 841 aaKnown RBP12.63□□□□□ -0.39
HLA-DOA-203ENST00000467465 NBPF15Q8N660 670 aa12.63□□□□□ -0.39
HLA-DOA-203ENST00000467465 SETDB2Q96T68 719 aa12.63□□□□□ -0.39
HLA-DOA-203ENST00000467465 ANKRD31Q8N7Z5 1873 aa12.62□□□□□ -0.39
HLA-DOA-203ENST00000467465 PIP4K2AP48426 406 aaPredicted RBP12.62□□□□□ -0.39
HLA-DOA-203ENST00000467465 BICDL1Q6ZP65 573 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms