RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 C4orf17Q53FE4 359 aa7.6□□□□□ -1.19
VPS50-209ENST00000467326 LARP1Q6PKG0 1096 aaKnown RBP7.6□□□□□ -1.19
VPS50-209ENST00000467326 A0A1B0GTH6 734 aa7.59□□□□□ -1.19
VPS50-209ENST00000467326 FAM196BA6NMK8 535 aa7.59□□□□□ -1.19
VPS50-209ENST00000467326 ZBTB7BO15156 539 aaPredicted RBP7.59□□□□□ -1.19
VPS50-209ENST00000467326 PHKA2P46019 1235 aa7.59□□□□□ -1.19
VPS50-209ENST00000467326 PLA2G4AP47712 749 aa7.59□□□□□ -1.19
VPS50-209ENST00000467326 KANK4Q5T7N3 995 aaPredicted RBP7.59□□□□□ -1.19
VPS50-209ENST00000467326 BEND7Q8N7W2 519 aaPredicted RBP7.59□□□□□ -1.19
VPS50-209ENST00000467326 WHAMMQ8TF30 809 aa7.59□□□□□ -1.19
VPS50-209ENST00000467326 VRTNQ9H8Y1 702 aa7.59□□□□□ -1.19
VPS50-209ENST00000467326 USP3Q9Y6I4 520 aa7.59□□□□□ -1.19
VPS50-209ENST00000467326 ADAM23O75077 832 aa7.58□□□□□ -1.2
VPS50-209ENST00000467326 RFX1P22670 979 aa7.58□□□□□ -1.2
VPS50-209ENST00000467326 EPHA4P54764 986 aa7.58□□□□□ -1.2
VPS50-209ENST00000467326 PTK7Q13308 1070 aa7.58□□□□□ -1.2
VPS50-209ENST00000467326 FOXR1Q6PIV2 292 aa7.58□□□□□ -1.2
VPS50-209ENST00000467326 RIPOR1Q6ZS17 1223 aa7.58□□□□□ -1.2
VPS50-209ENST00000467326 GMCL1Q96IK5 515 aa7.58□□□□□ -1.2
VPS50-209ENST00000467326 GAS2L1Q99501 681 aaPredicted RBP7.58□□□□□ -1.2
VPS50-209ENST00000467326 NIFKQ9BYG3 293 aaKnown RBP7.58□□□□□ -1.2
VPS50-209ENST00000467326 SCHIP1Q9P0W5 487 aaPredicted RBP7.58□□□□□ -1.2
VPS50-209ENST00000467326 SERPINA10Q9UK55 444 aa7.58□□□□□ -1.2
VPS50-209ENST00000467326 IQSEC3Q9UPP2 1182 aaPredicted RBP7.58□□□□□ -1.2
VPS50-209ENST00000467326 CDK2AP1O14519 115 aa7.57□□□□□ -1.2
VPS50-209ENST00000467326 TNS4Q8IZW8 715 aa7.57□□□□□ -1.2
VPS50-209ENST00000467326 GALNT6Q8NCL4 622 aa7.57□□□□□ -1.2
VPS50-209ENST00000467326 GPAMQ9HCL2 828 aa7.57□□□□□ -1.2
VPS50-209ENST00000467326 SFI1A8K8P3 1242 aa7.56□□□□□ -1.2
VPS50-209ENST00000467326 M0R2N6 131 aa7.56□□□□□ -1.2
VPS50-209ENST00000467326 DKK1O94907 266 aa7.56□□□□□ -1.2
VPS50-209ENST00000467326 SEC13P55735 322 aa7.56□□□□□ -1.2
VPS50-209ENST00000467326 DPYDQ12882 1025 aa7.56□□□□□ -1.2
VPS50-209ENST00000467326 SLC9A9Q8IVB4 645 aa7.56□□□□□ -1.2
VPS50-209ENST00000467326 ZNF295-AS1Q8N0V1 137 aa7.56□□□□□ -1.2
VPS50-209ENST00000467326 CCDC82Q8N4S0 544 aa7.56□□□□□ -1.2
VPS50-209ENST00000467326 TSEN2Q8NCE0 465 aaKnown RBP7.56□□□□□ -1.2
VPS50-209ENST00000467326 ZNF837Q96EG3 531 aaPredicted RBP7.56□□□□□ -1.2
VPS50-209ENST00000467326 CUEDC1Q9NWM3 386 aaPredicted RBP7.56□□□□□ -1.2
VPS50-209ENST00000467326 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.55□□□□□ -1.2
VPS50-209ENST00000467326 F11P03951 625 aa7.55□□□□□ -1.2
VPS50-209ENST00000467326 CELA2BP08218 269 aaPredicted RBP7.55□□□□□ -1.2
VPS50-209ENST00000467326 NBPF1Q3BBV0 1214 aa7.55□□□□□ -1.2
VPS50-209ENST00000467326 LYPD4Q6UWN0 246 aa7.55□□□□□ -1.2
VPS50-209ENST00000467326 ANKMY2Q8IV38 441 aa7.55□□□□□ -1.2
VPS50-209ENST00000467326 TRIM22Q8IYM9 498 aa7.55□□□□□ -1.2
VPS50-209ENST00000467326 C1orf115Q9H7X2 142 aa7.55□□□□□ -1.2
VPS50-209ENST00000467326 CABP1Q9NZU7 370 aa7.55□□□□□ -1.2
VPS50-209ENST00000467326 TIMELESSQ9UNS1 1208 aa7.55□□□□□ -1.2
VPS50-209ENST00000467326 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.54□□□□□ -1.2
VPS50-209ENST00000467326 H7C1W4 665 aa7.54□□□□□ -1.2
VPS50-209ENST00000467326 PLA2G4EQ3MJ16 856 aa7.54□□□□□ -1.2
VPS50-209ENST00000467326 CDCA8Q53HL2 280 aa7.54□□□□□ -1.2
VPS50-209ENST00000467326 TSPAN10Q9H1Z9 355 aaPredicted RBP7.54□□□□□ -1.2
VPS50-209ENST00000467326 CSB-PGBD3P0DP91 1061 aa7.53□□□□□ -1.2
VPS50-209ENST00000467326 ATP4AP20648 1035 aa7.53□□□□□ -1.2
VPS50-209ENST00000467326 MSX1P28360 303 aa7.53□□□□□ -1.2
VPS50-209ENST00000467326 TBCELQ5QJ74 424 aa7.53□□□□□ -1.2
VPS50-209ENST00000467326 PGBD3Q8N328 593 aa7.53□□□□□ -1.2
VPS50-209ENST00000467326 NEDD1Q8NHV4 660 aa7.53□□□□□ -1.2
VPS50-209ENST00000467326 DCAF5Q96JK2 942 aa7.53□□□□□ -1.2
VPS50-209ENST00000467326 SPOCK3Q9BQ16 436 aa7.53□□□□□ -1.2
VPS50-209ENST00000467326 KRTAP9-2Q9BYQ4 174 aa7.53□□□□□ -1.2
VPS50-209ENST00000467326 NUCKS1Q9H1E3 243 aaKnown RBP7.53□□□□□ -1.2
VPS50-209ENST00000467326 TATP17735 454 aaPredicted RBP7.52□□□□□ -1.21
VPS50-209ENST00000467326 PSMA6P60900 246 aaKnown RBP7.52□□□□□ -1.21
VPS50-209ENST00000467326 DBN1Q16643 649 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 C1orf216Q8TAB5 229 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 ZDHHC1Q8WTX9 485 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 PBXIP1Q96AQ6 731 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 AIDAQ96BJ3 306 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 ARXQ96QS3 562 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 RUBCNLQ9H714 662 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 MBIPQ9NS73 344 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 LRRC4BQ9NT99 713 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 ZDHHC3Q9NYG2 299 aa7.52□□□□□ -1.21
VPS50-209ENST00000467326 NOVA2Q9UNW9 492 aaKnown RBP7.52□□□□□ -1.21
VPS50-209ENST00000467326 NSFL1CQ9UNZ2 370 aaKnown RBP7.52□□□□□ -1.21
VPS50-209ENST00000467326 TEAD4Q15561 434 aa7.51□□□□□ -1.21
VPS50-209ENST00000467326 ZNF232Q9UNY5 417 aa7.51□□□□□ -1.21
VPS50-209ENST00000467326 CHMP3Q9Y3E7 222 aa7.51□□□□□ -1.21
VPS50-209ENST00000467326 PARP3Q9Y6F1 533 aa7.51□□□□□ -1.21
VPS50-209ENST00000467326 SERTM1A2A2V5 107 aa7.5□□□□□ -1.21
VPS50-209ENST00000467326 EML1O00423 815 aa7.5□□□□□ -1.21
VPS50-209ENST00000467326 PPP1R12BO60237 982 aaPredicted RBP7.5□□□□□ -1.21
VPS50-209ENST00000467326 LBRQ14739 615 aaKnown RBP7.5□□□□□ -1.21
VPS50-209ENST00000467326 EFHC2Q5JST6 749 aa7.5□□□□□ -1.21
VPS50-209ENST00000467326 ALYREFQ86V81 257 aaKnown RBP7.5□□□□□ -1.21
VPS50-209ENST00000467326 FAM200AQ8TCP9 573 aa7.5□□□□□ -1.21
VPS50-209ENST00000467326 L3MBTL2Q969R5 705 aa7.5□□□□□ -1.21
VPS50-209ENST00000467326 GTPBP3Q969Y2 492 aaKnown RBP7.5□□□□□ -1.21
VPS50-209ENST00000467326 CRISPLD1Q9H336 500 aa7.5□□□□□ -1.21
VPS50-209ENST00000467326 ZMIZ1Q9ULJ6 1067 aa7.5□□□□□ -1.21
VPS50-209ENST00000467326 KRTAP9-6A0A140TA67 174 aa7.49□□□□□ -1.21
VPS50-209ENST00000467326 K7ELQ4 463 aaPredicted RBP7.49□□□□□ -1.21
VPS50-209ENST00000467326 GPR25O00155 361 aa7.49□□□□□ -1.21
VPS50-209ENST00000467326 BCRP11274 1271 aa7.49□□□□□ -1.21
VPS50-209ENST00000467326 NOS2P35228 1153 aa7.49□□□□□ -1.21
VPS50-209ENST00000467326 TXLNAP40222 546 aa7.49□□□□□ -1.21
VPS50-209ENST00000467326 SRPK2P78362 688 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms