RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 MX2P20592 715 aa8.66□□□□□ -1.02
LRCH3-212ENST00000466845 PLA2G4AP47712 749 aa8.66□□□□□ -1.02
LRCH3-212ENST00000466845 MAP3K10Q02779 954 aa8.66□□□□□ -1.02
LRCH3-212ENST00000466845 ZNF385CQ66K41 422 aaPredicted RBP8.66□□□□□ -1.02
LRCH3-212ENST00000466845 CCDC102BQ68D86 513 aa8.66□□□□□ -1.02
LRCH3-212ENST00000466845 SVOPQ8N4V2 548 aa8.66□□□□□ -1.02
LRCH3-212ENST00000466845 TFIP11Q9UBB9 837 aaKnown RBP8.66□□□□□ -1.02
LRCH3-212ENST00000466845 ATXN7L1Q9ULK2 861 aaPredicted RBP8.66□□□□□ -1.02
LRCH3-212ENST00000466845 OGFOD1Q8N543 542 aa8.65□□□□□ -1.02
LRCH3-212ENST00000466845 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.65□□□□□ -1.02
LRCH3-212ENST00000466845 AIDAQ96BJ3 306 aa8.65□□□□□ -1.02
LRCH3-212ENST00000466845 GPAMQ9HCL2 828 aa8.65□□□□□ -1.02
LRCH3-212ENST00000466845 CABP1Q9NZU7 370 aa8.65□□□□□ -1.02
LRCH3-212ENST00000466845 RNF225M0QZC1 329 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-212ENST00000466845 CDK11BP21127 795 aaKnown RBP8.64□□□□□ -1.03
LRCH3-212ENST00000466845 TEAD4Q15561 434 aa8.64□□□□□ -1.03
LRCH3-212ENST00000466845 SIX5Q8N196 739 aa8.64□□□□□ -1.03
LRCH3-212ENST00000466845 PPP1R12CQ9BZL4 782 aa8.64□□□□□ -1.03
LRCH3-212ENST00000466845 CDK11AQ9UQ88 783 aaPredicted RBP8.64□□□□□ -1.03
LRCH3-212ENST00000466845 CHMP3Q9Y3E7 222 aa8.64□□□□□ -1.03
LRCH3-212ENST00000466845 IGF1RP08069 1367 aa8.63□□□□□ -1.03
LRCH3-212ENST00000466845 FOXK2Q01167 660 aa8.63□□□□□ -1.03
LRCH3-212ENST00000466845 LARP1Q6PKG0 1096 aaKnown RBP8.63□□□□□ -1.03
LRCH3-212ENST00000466845 ZNF295-AS1Q8N0V1 137 aa8.63□□□□□ -1.03
LRCH3-212ENST00000466845 TPCN2Q8NHX9 752 aa8.63□□□□□ -1.03
LRCH3-212ENST00000466845 GAS2L2Q8NHY3 880 aa8.63□□□□□ -1.03
LRCH3-212ENST00000466845 RUBCNLQ9H714 662 aa8.63□□□□□ -1.03
LRCH3-212ENST00000466845 PCDHGC4Q9Y5F7 938 aa8.63□□□□□ -1.03
LRCH3-212ENST00000466845 MAFBQ9Y5Q3 323 aaPredicted RBP8.63□□□□□ -1.03
LRCH3-212ENST00000466845 GPR25O00155 361 aa8.62□□□□□ -1.03
LRCH3-212ENST00000466845 ARHGEF15O94989 841 aa8.62□□□□□ -1.03
LRCH3-212ENST00000466845 EPHA4P54764 986 aa8.62□□□□□ -1.03
LRCH3-212ENST00000466845 ADAMTS8Q9UP79 889 aa8.62□□□□□ -1.03
LRCH3-212ENST00000466845 CELA2BP08218 269 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-212ENST00000466845 RASA1P20936 1047 aa8.61□□□□□ -1.03
LRCH3-212ENST00000466845 NOS2P35228 1153 aa8.61□□□□□ -1.03
LRCH3-212ENST00000466845 CLDN10P78369 228 aa8.61□□□□□ -1.03
LRCH3-212ENST00000466845 UBAP2LQ14157 1087 aaKnown RBP8.61□□□□□ -1.03
LRCH3-212ENST00000466845 ARSJQ5FYB0 599 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-212ENST00000466845 GDF2Q9UK05 429 aaPredicted RBP8.61□□□□□ -1.03
LRCH3-212ENST00000466845 BCRP11274 1271 aa8.6□□□□□ -1.03
LRCH3-212ENST00000466845 ATP4AP20648 1035 aa8.6□□□□□ -1.03
LRCH3-212ENST00000466845 MARSP56192 900 aaKnown RBP8.6□□□□□ -1.03
LRCH3-212ENST00000466845 KCNMA1Q12791 1236 aa8.6□□□□□ -1.03
LRCH3-212ENST00000466845 SLC9A9Q8IVB4 645 aa8.6□□□□□ -1.03
LRCH3-212ENST00000466845 L3MBTL2Q969R5 705 aa8.6□□□□□ -1.03
LRCH3-212ENST00000466845 SCARF2Q96GP6 870 aaPredicted RBP8.6□□□□□ -1.03
LRCH3-212ENST00000466845 VRTNQ9H8Y1 702 aa8.6□□□□□ -1.03
LRCH3-212ENST00000466845 NDFIP2Q9NV92 336 aa8.6□□□□□ -1.03
LRCH3-212ENST00000466845 CCDC180Q9P1Z9 1646 aa8.6□□□□□ -1.03
LRCH3-212ENST00000466845 SHROOM4Q9ULL8 1493 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 A0A1W2PNR3 127 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 SERTM1A2A2V5 107 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 THBS1P07996 1170 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 SEC13P55735 322 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 PSMA6P60900 246 aaKnown RBP8.59□□□□□ -1.03
LRCH3-212ENST00000466845 PDE4CQ08493 712 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 SAMD5Q5TGI4 173 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 C1orf53Q5VUE5 145 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 LYPD4Q6UWN0 246 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 STAG2Q8N3U4 1231 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 ZCCHC2Q9C0B9 1178 aaKnown RBP8.59□□□□□ -1.03
LRCH3-212ENST00000466845 GJA3Q9Y6H8 435 aa8.59□□□□□ -1.03
LRCH3-212ENST00000466845 FAM196BA6NMK8 535 aa8.58□□□□□ -1.04
LRCH3-212ENST00000466845 ATXN7O15265 892 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-212ENST00000466845 FGFR3P22607 806 aa8.58□□□□□ -1.04
LRCH3-212ENST00000466845 BRD2P25440 801 aaKnown RBP8.58□□□□□ -1.04
LRCH3-212ENST00000466845 HIRAP54198 1017 aaPredicted RBP8.58□□□□□ -1.04
LRCH3-212ENST00000466845 LAMC2Q13753 1193 aa8.58□□□□□ -1.04
LRCH3-212ENST00000466845 FAM182BQ5T319 152 aa8.58□□□□□ -1.04
LRCH3-212ENST00000466845 TNS4Q8IZW8 715 aa8.58□□□□□ -1.04
LRCH3-212ENST00000466845 WHAMMQ8TF30 809 aa8.58□□□□□ -1.04
LRCH3-212ENST00000466845 ZIC5Q96T25 663 aa8.58□□□□□ -1.04
LRCH3-212ENST00000466845 NEUROD4Q9HD90 331 aa8.58□□□□□ -1.04
LRCH3-212ENST00000466845 KIAA1024Q9UPX6 916 aa8.58□□□□□ -1.04
LRCH3-212ENST00000466845 BNIP3LO60238 219 aa8.57□□□□□ -1.04
LRCH3-212ENST00000466845 KANK4Q5T7N3 995 aaPredicted RBP8.57□□□□□ -1.04
LRCH3-212ENST00000466845 POTEAQ6S8J7 498 aa8.57□□□□□ -1.04
LRCH3-212ENST00000466845 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
LRCH3-212ENST00000466845 GOLGA6L1Q8N7Z2 621 aa8.57□□□□□ -1.04
LRCH3-212ENST00000466845 OXCT2Q9BYC2 517 aaPredicted RBP8.57□□□□□ -1.04
LRCH3-212ENST00000466845 AVENQ9NQS1 362 aaPredicted RBP8.57□□□□□ -1.04
LRCH3-212ENST00000466845 ZNF232Q9UNY5 417 aa8.57□□□□□ -1.04
LRCH3-212ENST00000466845 EML1O00423 815 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 DKK1O94907 266 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 FAM157BP0CG42 384 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 BMP4P12644 408 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 LMOD1P29536 600 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-212ENST00000466845 HIF1AQ16665 826 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 ACDQ96AP0 544 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 KLRG1Q96E93 195 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 ZMYND15Q9H091 742 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 ANKIB1Q9P2G1 1089 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 ZNF777Q9ULD5 760 aaPredicted RBP8.56□□□□□ -1.04
LRCH3-212ENST00000466845 USP3Q9Y6I4 520 aa8.56□□□□□ -1.04
LRCH3-212ENST00000466845 OIP5O43482 229 aa8.55□□□□□ -1.04
LRCH3-212ENST00000466845 PTK7Q13308 1070 aa8.55□□□□□ -1.04
LRCH3-212ENST00000466845 KANK3Q6NY19 840 aa8.55□□□□□ -1.04
LRCH3-212ENST00000466845 BEND7Q8N7W2 519 aaPredicted RBP8.55□□□□□ -1.04
LRCH3-212ENST00000466845 ZDHHC1Q8WTX9 485 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms