RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 LTBP3Q9NS15 1303 aa11.4□□□□□ -0.58
APP-214ENST00000466453 AFDNP55196 1824 aaKnown RBP11.4□□□□□ -0.58
APP-214ENST00000466453 EPHX2P34913 555 aa11.4□□□□□ -0.58
APP-214ENST00000466453 ATP6V1AP38606 617 aa11.4□□□□□ -0.58
APP-214ENST00000466453 PNMA8AQ86V59 439 aaPredicted RBP11.4□□□□□ -0.58
APP-214ENST00000466453 IP6K1Q92551 441 aa11.4□□□□□ -0.58
APP-214ENST00000466453 LTV1Q96GA3 475 aaPredicted RBP11.4□□□□□ -0.58
APP-214ENST00000466453 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
APP-214ENST00000466453 HACL1Q9UJ83 578 aa11.4□□□□□ -0.58
APP-214ENST00000466453 HPS5Q9UPZ3 1129 aa11.4□□□□□ -0.58
APP-214ENST00000466453 INSRP06213 1382 aa11.4□□□□□ -0.59
APP-214ENST00000466453 TTC28Q96AY4 2481 aa11.4□□□□□ -0.59
APP-214ENST00000466453 ZNF831Q5JPB2 1677 aa11.4□□□□□ -0.59
APP-214ENST00000466453 POLRMTO00411 1230 aaKnown RBP11.39□□□□□ -0.59
APP-214ENST00000466453 CIAPIN1Q6FI81 312 aa11.39□□□□□ -0.59
APP-214ENST00000466453 CTU1Q7Z7A3 348 aaKnown RBP11.39□□□□□ -0.59
APP-214ENST00000466453 NRXN2Q9P2S2 1712 aa11.38□□□□□ -0.59
APP-214ENST00000466453 FKBP8Q14318 412 aa11.38□□□□□ -0.59
APP-214ENST00000466453 CST9Q5W186 159 aa11.38□□□□□ -0.59
APP-214ENST00000466453 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
APP-214ENST00000466453 KDRP35968 1356 aa11.38□□□□□ -0.59
APP-214ENST00000466453 CNTNAP4Q9C0A0 1308 aa11.37□□□□□ -0.59
APP-214ENST00000466453 RC3H1Q5TC82 1133 aaKnown RBP11.37□□□□□ -0.59
APP-214ENST00000466453 HHIPL1Q96JK4 782 aa11.37□□□□□ -0.59
APP-214ENST00000466453 TAOK3Q9H2K8 898 aa11.37□□□□□ -0.59
APP-214ENST00000466453 MAP3K19Q56UN5 1328 aa11.36□□□□□ -0.59
APP-214ENST00000466453 RPS6KA4O75676 772 aa11.36□□□□□ -0.59
APP-214ENST00000466453 FMR1Q06787 632 aaKnown RBP eCLIP11.36□□□□□ -0.59
APP-214ENST00000466453 SAPCD2Q86UD0 394 aa11.36□□□□□ -0.59
APP-214ENST00000466453 SAGE1Q9NXZ1 904 aa11.36□□□□□ -0.59
APP-214ENST00000466453 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
APP-214ENST00000466453 KTN1Q86UP2 1357 aaKnown RBP11.36□□□□□ -0.59
APP-214ENST00000466453 CACNA1AO00555 2505 aa11.36□□□□□ -0.59
APP-214ENST00000466453 USP42Q9H9J4 1324 aaKnown RBP11.35□□□□□ -0.59
APP-214ENST00000466453 CENPJQ9HC77 1338 aaPredicted RBP11.35□□□□□ -0.59
APP-214ENST00000466453 CYP27B1O15528 508 aa11.35□□□□□ -0.59
APP-214ENST00000466453 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
APP-214ENST00000466453 ASAP1Q9ULH1 1129 aa11.35□□□□□ -0.59
APP-214ENST00000466453 TM4SF1P30408 202 aa11.34□□□□□ -0.59
APP-214ENST00000466453 DCAF11Q8TEB1 546 aa11.34□□□□□ -0.59
APP-214ENST00000466453 RAPGEF4Q8WZA2 1011 aa11.34□□□□□ -0.59
APP-214ENST00000466453 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
APP-214ENST00000466453 AKAP11Q9UKA4 1901 aa11.34□□□□□ -0.59
APP-214ENST00000466453 LOC105371045A0A1W2PR82 267 aa11.33□□□□□ -0.6
APP-214ENST00000466453 NOGQ13253 232 aa11.33□□□□□ -0.6
APP-214ENST00000466453 NME9Q86XW9 330 aa11.33□□□□□ -0.6
APP-214ENST00000466453 C2CD5Q86YS7 1000 aa11.33□□□□□ -0.6
APP-214ENST00000466453 RNF123Q5XPI4 1314 aa11.33□□□□□ -0.6
APP-214ENST00000466453 ZNF541Q9H0D2 1346 aa11.33□□□□□ -0.6
APP-214ENST00000466453 MUC3AQ02505 3323 aa11.32□□□□□ -0.6
APP-214ENST00000466453 SCN11AQ9UI33 1791 aa11.32□□□□□ -0.6
APP-214ENST00000466453 C21orf2O43822 256 aa11.32□□□□□ -0.6
APP-214ENST00000466453 TATP17735 454 aaPredicted RBP11.32□□□□□ -0.6
APP-214ENST00000466453 PKN2Q16513 984 aaKnown RBP11.32□□□□□ -0.6
APP-214ENST00000466453 MPNDQ8N594 471 aa11.32□□□□□ -0.6
APP-214ENST00000466453 H0YIN7 160 aa11.31□□□□□ -0.6
APP-214ENST00000466453 TRAF5O00463 557 aa11.31□□□□□ -0.6
APP-214ENST00000466453 AKAP4Q5JQC9 854 aa11.31□□□□□ -0.6
APP-214ENST00000466453 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.31□□□□□ -0.6
APP-214ENST00000466453 SLC4A9Q96Q91 983 aa11.31□□□□□ -0.6
APP-214ENST00000466453 ZIC5Q96T25 663 aa11.31□□□□□ -0.6
APP-214ENST00000466453 TMOD3Q9NYL9 352 aa11.31□□□□□ -0.6
APP-214ENST00000466453 COL11A2P13942 1736 aaPredicted RBP11.3□□□□□ -0.6
APP-214ENST00000466453 HOXC9P31274 260 aa11.3□□□□□ -0.6
APP-214ENST00000466453 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
APP-214ENST00000466453 NBPF6Q5VWK0 638 aa11.3□□□□□ -0.6
APP-214ENST00000466453 NBPF4Q96M43 638 aa11.3□□□□□ -0.6
APP-214ENST00000466453 ATG3Q9NT62 314 aa11.3□□□□□ -0.6
APP-214ENST00000466453 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
APP-214ENST00000466453 SBNO2Q9Y2G9 1366 aa11.29□□□□□ -0.6
APP-214ENST00000466453 RBBP6Q7Z6E9 1792 aaKnown RBP11.29□□□□□ -0.6
APP-214ENST00000466453 USHBP1Q8N6Y0 703 aa11.29□□□□□ -0.6
APP-214ENST00000466453 COL25A1Q9BXS0 654 aaPredicted RBP11.29□□□□□ -0.6
APP-214ENST00000466453 CARMIL3Q8ND23 1372 aa11.28□□□□□ -0.6
APP-214ENST00000466453 SLX4Q8IY92 1834 aa11.28□□□□□ -0.6
APP-214ENST00000466453 EVC2Q86UK5 1308 aa11.28□□□□□ -0.6
APP-214ENST00000466453 ARFGEF2Q9Y6D5 1785 aa11.28□□□□□ -0.6
APP-214ENST00000466453 CACNA1SQ13698 1873 aa11.27□□□□□ -0.6
APP-214ENST00000466453 OTUD5Q96G74 571 aa11.27□□□□□ -0.61
APP-214ENST00000466453 RNF186Q9NXI6 227 aa11.27□□□□□ -0.61
APP-214ENST00000466453 PIEZO1Q92508 2521 aa11.26□□□□□ -0.61
APP-214ENST00000466453 CELF2O95319 508 aaKnown RBP11.26□□□□□ -0.61
APP-214ENST00000466453 BCORQ6W2J9 1755 aa11.26□□□□□ -0.61
APP-214ENST00000466453 TRPA1O75762 1119 aa11.25□□□□□ -0.61
APP-214ENST00000466453 NFIXQ14938 502 aa11.25□□□□□ -0.61
APP-214ENST00000466453 SOGA3Q5TF21 947 aa11.25□□□□□ -0.61
APP-214ENST00000466453 GPC2Q8N158 579 aa11.25□□□□□ -0.61
APP-214ENST00000466453 ZNF622Q969S3 477 aaKnown RBP eCLIP11.25□□□□□ -0.61
APP-214ENST00000466453 PDZRN3Q9UPQ7 1066 aa11.25□□□□□ -0.61
APP-214ENST00000466453 RTL1A6NKG5 1358 aa11.25□□□□□ -0.61
APP-214ENST00000466453 BICDL1Q6ZP65 573 aa11.24□□□□□ -0.61
APP-214ENST00000466453 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
APP-214ENST00000466453 FZD9O00144 591 aa11.23□□□□□ -0.61
APP-214ENST00000466453 SERPINB2P05120 415 aa11.23□□□□□ -0.61
APP-214ENST00000466453 AMPHP49418 695 aa11.23□□□□□ -0.61
APP-214ENST00000466453 FBXO46Q6PJ61 603 aaPredicted RBP11.23□□□□□ -0.61
APP-214ENST00000466453 RBM42Q9BTD8 480 aaKnown RBP11.23□□□□□ -0.61
APP-214ENST00000466453 PRDM6Q9NQX0 595 aa11.23□□□□□ -0.61
APP-214ENST00000466453 LAMA2P24043 3122 aaKnown RBP11.23□□□□□ -0.61
APP-214ENST00000466453 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms