RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 COL14A1Q05707 1796 aaKnown RBP7.84□□□□□ -1.15
CHMP3-206ENST00000466032 RGPD1P0DJD0 1748 aa7.84□□□□□ -1.15
CHMP3-206ENST00000466032 ZBTB7CA1YPR0 619 aa7.84□□□□□ -1.15
CHMP3-206ENST00000466032 E9PSI1 815 aa7.84□□□□□ -1.15
CHMP3-206ENST00000466032 CT47B1P0C2W7 299 aaPredicted RBP7.84□□□□□ -1.15
CHMP3-206ENST00000466032 TATP17735 454 aaPredicted RBP7.84□□□□□ -1.15
CHMP3-206ENST00000466032 CABLES1Q8TDN4 633 aa7.84□□□□□ -1.15
CHMP3-206ENST00000466032 RTF1Q92541 710 aaKnown RBP7.84□□□□□ -1.15
CHMP3-206ENST00000466032 CARD10Q9BWT7 1032 aa7.84□□□□□ -1.15
CHMP3-206ENST00000466032 MYH16Q9H6N6 1097 aa7.84□□□□□ -1.15
CHMP3-206ENST00000466032 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.84□□□□□ -1.15
CHMP3-206ENST00000466032 BABAM1Q9NWV8 329 aa7.84□□□□□ -1.15
CHMP3-206ENST00000466032 COL18A1P39060 1754 aa7.84□□□□□ -1.15
CHMP3-206ENST00000466032 ABCA3Q99758 1704 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 HSP90AB1P08238 724 aaKnown RBP7.83□□□□□ -1.16
CHMP3-206ENST00000466032 HMOX1P09601 288 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 RIPK4P57078 832 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 FKBP8Q14318 412 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 NBPF6Q5VWK0 638 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 TOM1L2Q6ZVM7 507 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 WWC1Q8IX03 1113 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 NBPF4Q96M43 638 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 AAASQ9NRG9 546 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 NLRP2Q9NX02 1062 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 SPG7Q9UQ90 795 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 CRB1P82279 1406 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 LMO7Q8WWI1 1683 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 CAMTA1Q9Y6Y1 1673 aa7.83□□□□□ -1.16
CHMP3-206ENST00000466032 ZNF521Q96K83 1311 aa7.82□□□□□ -1.16
CHMP3-206ENST00000466032 COL5A2P05997 1499 aaPredicted RBP7.82□□□□□ -1.16
CHMP3-206ENST00000466032 FAM83GA6ND36 823 aa7.82□□□□□ -1.16
CHMP3-206ENST00000466032 TJAP1Q5JTD0 557 aa7.82□□□□□ -1.16
CHMP3-206ENST00000466032 LAPTM4BQ86VI4 370 aa7.82□□□□□ -1.16
CHMP3-206ENST00000466032 CCDC146Q8IYE0 955 aa7.82□□□□□ -1.16
CHMP3-206ENST00000466032 ZNF428Q96B54 188 aa7.82□□□□□ -1.16
CHMP3-206ENST00000466032 LTV1Q96GA3 475 aaPredicted RBP7.82□□□□□ -1.16
CHMP3-206ENST00000466032 NWD2Q9ULI1 1742 aa7.81□□□□□ -1.16
CHMP3-206ENST00000466032 GNAT3A8MTJ3 354 aa7.81□□□□□ -1.16
CHMP3-206ENST00000466032 PRKCSHP14314 528 aaPredicted RBP7.81□□□□□ -1.16
CHMP3-206ENST00000466032 GNAI1P63096 354 aa7.81□□□□□ -1.16
CHMP3-206ENST00000466032 CHRNA2Q15822 529 aa7.81□□□□□ -1.16
CHMP3-206ENST00000466032 AKAP4Q5JQC9 854 aa7.81□□□□□ -1.16
CHMP3-206ENST00000466032 C1orf141Q5JVX7 400 aa7.81□□□□□ -1.16
CHMP3-206ENST00000466032 FNBP4Q8N3X1 1017 aaPredicted RBP7.81□□□□□ -1.16
CHMP3-206ENST00000466032 FBXO22Q8NEZ5 403 aa7.81□□□□□ -1.16
CHMP3-206ENST00000466032 BTG4Q9NY30 223 aa7.81□□□□□ -1.16
CHMP3-206ENST00000466032 RABGEF1Q9UJ41 708 aa7.81□□□□□ -1.16
CHMP3-206ENST00000466032 SOS1Q07889 1333 aaPredicted RBP7.8□□□□□ -1.16
CHMP3-206ENST00000466032 OVOS2A0A0G2JMS6 1433 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 IL2RBP14784 551 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 HSPA1LP34931 641 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 PRR20EP86478 221 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 PRR20CP86479 221 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 PRR20DP86480 221 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 PRR20BP86481 221 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 PRR20AP86496 221 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 UNC5CLQ8IV45 518 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 IFT57Q9NWB7 429 aa7.8□□□□□ -1.16
CHMP3-206ENST00000466032 SLIT2O94813 1529 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 SLFN5Q08AF3 891 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 NEUROD2Q15784 382 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 MEX3CQ5U5Q3 659 aaKnown RBP7.79□□□□□ -1.16
CHMP3-206ENST00000466032 BARGINQ6ZT62 677 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 AEBP1Q8IUX7 1158 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 TRMT2AQ8IZ69 625 aaKnown RBP7.79□□□□□ -1.16
CHMP3-206ENST00000466032 IFNL2Q8IZJ0 200 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 TMC2Q8TDI7 906 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 NGLY1Q96IV0 654 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 PHACTR3Q96KR7 559 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 CFAP44Q96MT7 982 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 ANP32EQ9BTT0 268 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 MAP3K5Q99683 1374 aa7.79□□□□□ -1.16
CHMP3-206ENST00000466032 PCDH11XQ9BZA7 1347 aa7.78□□□□□ -1.16
CHMP3-206ENST00000466032 PCDH11YQ9BZA8 1340 aa7.78□□□□□ -1.16
CHMP3-206ENST00000466032 NUTM2BA6NNL0 878 aaPredicted RBP7.78□□□□□ -1.16
CHMP3-206ENST00000466032 NUTM2EB1AL46 878 aaPredicted RBP7.78□□□□□ -1.16
CHMP3-206ENST00000466032 ADAMTS2O95450 1211 aa7.78□□□□□ -1.16
CHMP3-206ENST00000466032 VPS72Q15906 364 aa7.78□□□□□ -1.16
CHMP3-206ENST00000466032 MTHFSDQ2M296 383 aaKnown RBP7.78□□□□□ -1.16
CHMP3-206ENST00000466032 ZNF530Q6P9A1 599 aaPredicted RBP7.78□□□□□ -1.16
CHMP3-206ENST00000466032 NUTM2AQ8IVF1 878 aaPredicted RBP7.78□□□□□ -1.16
CHMP3-206ENST00000466032 ZCRB1Q8TBF4 217 aaKnown RBP7.78□□□□□ -1.16
CHMP3-206ENST00000466032 DCAF5Q96JK2 942 aa7.78□□□□□ -1.16
CHMP3-206ENST00000466032 PSMG3-AS1Q96PY0 264 aa7.78□□□□□ -1.16
CHMP3-206ENST00000466032 STRN4Q9NRL3 753 aa7.78□□□□□ -1.16
CHMP3-206ENST00000466032 GTF3C3Q9Y5Q9 886 aa7.78□□□□□ -1.16
CHMP3-206ENST00000466032 EXOC5O00471 708 aa7.77□□□□□ -1.17
CHMP3-206ENST00000466032 HMGB2P26583 209 aaKnown RBP7.77□□□□□ -1.17
CHMP3-206ENST00000466032 LARP1Q6PKG0 1096 aaKnown RBP7.77□□□□□ -1.17
CHMP3-206ENST00000466032 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.77□□□□□ -1.17
CHMP3-206ENST00000466032 ZFRQ96KR1 1074 aaKnown RBP7.77□□□□□ -1.17
CHMP3-206ENST00000466032 SALL2Q9Y467 1007 aaPredicted RBP7.77□□□□□ -1.17
CHMP3-206ENST00000466032 PARP4Q9UKK3 1724 aaKnown RBP7.77□□□□□ -1.17
CHMP3-206ENST00000466032 SPATA31A1Q5TZJ5 1347 aa7.77□□□□□ -1.17
CHMP3-206ENST00000466032 SPATA31A5Q5VU36 1347 aa7.77□□□□□ -1.17
CHMP3-206ENST00000466032 SPATA31A7Q8IWB4 1347 aa7.77□□□□□ -1.17
CHMP3-206ENST00000466032 RGPD5Q99666 1765 aa7.76□□□□□ -1.17
CHMP3-206ENST00000466032 CEMIPQ8WUJ3 1361 aa7.76□□□□□ -1.17
CHMP3-206ENST00000466032 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.76□□□□□ -1.17
CHMP3-206ENST00000466032 ERVV-2B6SEH9 535 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms