RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 GLRX3O76003 335 aaKnown RBP9.5□□□□□ -0.89
RTL9-201ENST00000465301 MYCNP04198 464 aaPredicted RBP9.5□□□□□ -0.89
RTL9-201ENST00000465301 CATIPQ7Z7H3 387 aa9.5□□□□□ -0.89
RTL9-201ENST00000465301 UBXN4Q92575 508 aa9.5□□□□□ -0.89
RTL9-201ENST00000465301 CCDC113Q9H0I3 377 aa9.5□□□□□ -0.89
RTL9-201ENST00000465301 TTC12Q9H892 705 aaPredicted RBP9.5□□□□□ -0.89
RTL9-201ENST00000465301 SSRP1Q08945 709 aaKnown RBP9.5□□□□□ -0.89
RTL9-201ENST00000465301 FGD6Q6ZV73 1430 aa9.5□□□□□ -0.89
RTL9-201ENST00000465301 SH2B1Q9NRF2 756 aaPredicted RBP9.5□□□□□ -0.89
RTL9-201ENST00000465301 IFIT5Q13325 482 aaKnown RBP9.5□□□□□ -0.89
RTL9-201ENST00000465301 CCDC174Q6PII3 467 aa9.5□□□□□ -0.89
RTL9-201ENST00000465301 LRSAM1Q6UWE0 723 aa9.5□□□□□ -0.89
RTL9-201ENST00000465301 RAB3IL1Q8TBN0 382 aa9.5□□□□□ -0.89
RTL9-201ENST00000465301 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.5□□□□□ -0.89
RTL9-201ENST00000465301 SLC12A7Q9Y666 1083 aa9.5□□□□□ -0.89
RTL9-201ENST00000465301 V9GYY5 206 aaPredicted RBP9.5□□□□□ -0.89
RTL9-201ENST00000465301 POLR3GO15318 223 aaPredicted RBP9.49□□□□□ -0.89
RTL9-201ENST00000465301 FCHSD2O94868 740 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 FAM177A1Q8N128 213 aaPredicted RBP9.49□□□□□ -0.89
RTL9-201ENST00000465301 IL27Q8NEV9 243 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 CASQ1P31415 396 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 MAP3K9P80192 1104 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 TMCO3Q6UWJ1 677 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 ERMNQ8TAM6 284 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 CDC5LQ99459 802 aaKnown RBP9.49□□□□□ -0.89
RTL9-201ENST00000465301 TCP11L1Q9NUJ3 509 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 HDAC9Q9UKV0 1011 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 MINDY4BA8MYZ0 360 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 SFPQP23246 707 aaKnown RBP eCLIP9.49□□□□□ -0.89
RTL9-201ENST00000465301 LMAN1P49257 510 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 BCL11BQ9C0K0 894 aaPredicted RBP9.49□□□□□ -0.89
RTL9-201ENST00000465301 SCAND2PQ9GZW5 306 aaPredicted RBP9.49□□□□□ -0.89
RTL9-201ENST00000465301 IKBKGQ9Y6K9 419 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 GOPCQ9HD26 462 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 NLRP5P59047 1200 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 PDE4BQ07343 736 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 SPECC1LQ69YQ0 1117 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 CWC27Q6UX04 472 aaKnown RBP9.49□□□□□ -0.89
RTL9-201ENST00000465301 CHD1LQ86WJ1 897 aa9.49□□□□□ -0.89
RTL9-201ENST00000465301 GOLIM4O00461 696 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 CCDC175P0C221 793 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 ST5P78524 1137 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 KANK3Q6NY19 840 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 STX6O43752 255 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 NCBP1Q09161 790 aaKnown RBP9.48□□□□□ -0.89
RTL9-201ENST00000465301 C1orf115Q9H7X2 142 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 MVPQ14764 893 aaKnown RBP9.48□□□□□ -0.89
RTL9-201ENST00000465301 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 CABP1Q9NZU7 370 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 SYCP3Q8IZU3 236 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 DDX11Q96FC9 970 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 C8orf76Q96K31 380 aa9.48□□□□□ -0.89
RTL9-201ENST00000465301 NEMFO60524 1076 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 CCDC40Q4G0X9 1142 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 TDRD12Q587J7 1177 aaKnown RBP9.47□□□□□ -0.89
RTL9-201ENST00000465301 APBB1IPQ7Z5R6 666 aaPredicted RBP9.47□□□□□ -0.89
RTL9-201ENST00000465301 GOLGA6L9A6NEM1 432 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 PRPHP41219 470 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 FILIP1Q7Z7B0 1213 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 CCDC117Q8IWD4 279 aaPredicted RBP9.47□□□□□ -0.89
RTL9-201ENST00000465301 C16orf71Q8IYS4 520 aaPredicted RBP9.47□□□□□ -0.89
RTL9-201ENST00000465301 MACROD2A1Z1Q3 448 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 ZNF213O14771 459 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 RANBP6O60518 1105 aaKnown RBP9.47□□□□□ -0.89
RTL9-201ENST00000465301 TBCAO75347 108 aaKnown RBP9.47□□□□□ -0.89
RTL9-201ENST00000465301 MAP4K4O95819 1239 aaPredicted RBP9.47□□□□□ -0.89
RTL9-201ENST00000465301 TOP1P11387 765 aaKnown RBP9.47□□□□□ -0.89
RTL9-201ENST00000465301 CA8P35219 290 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 UBE4AQ14139 1066 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 EHBP1Q8NDI1 1231 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 DDX46Q7L014 1031 aaKnown RBP9.47□□□□□ -0.89
RTL9-201ENST00000465301 PPP1R42Q7Z4L9 355 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 KIAA1524Q8TCG1 905 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 TBC1D5Q92609 795 aa9.47□□□□□ -0.89
RTL9-201ENST00000465301 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.47□□□□□ -0.89
RTL9-201ENST00000465301 CASTP20810 708 aaKnown RBP9.46□□□□□ -0.89
RTL9-201ENST00000465301 RGS22Q8NE09 1264 aa9.46□□□□□ -0.89
RTL9-201ENST00000465301 PPP1R14CQ8TAE6 165 aa9.46□□□□□ -0.89
RTL9-201ENST00000465301 GOLGA8AA7E2F4 631 aa9.46□□□□□ -0.89
RTL9-201ENST00000465301 GOLGA8BA8MQT2 603 aa9.46□□□□□ -0.89
RTL9-201ENST00000465301 PRC1O43663 620 aa9.46□□□□□ -0.89
RTL9-201ENST00000465301 MTIF2P46199 727 aaKnown RBP9.46□□□□□ -0.89
RTL9-201ENST00000465301 ZGPATQ8N5A5 531 aaKnown RBP9.46□□□□□ -0.89
RTL9-201ENST00000465301 BICD1Q96G01 975 aa9.46□□□□□ -0.89
RTL9-201ENST00000465301 TRMT112Q9UI30 125 aaKnown RBP9.46□□□□□ -0.89
RTL9-201ENST00000465301 NFE2L2Q16236 605 aa9.46□□□□□ -0.9
RTL9-201ENST00000465301 NUP88Q99567 741 aaPredicted RBP9.46□□□□□ -0.9
RTL9-201ENST00000465301 KAT14Q9H8E8 782 aa9.46□□□□□ -0.9
RTL9-201ENST00000465301 KIF4BQ2VIQ3 1234 aa9.46□□□□□ -0.9
RTL9-201ENST00000465301 HYPKQ9NX55 129 aa9.46□□□□□ -0.9
RTL9-201ENST00000465301 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.46□□□□□ -0.9
RTL9-201ENST00000465301 C6orf229H3BNL8 230 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 BMP15O95972 392 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 LIG1P18858 919 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 MSANTD4Q8NCY6 345 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 RMND1Q9NWS8 449 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 POLA1P09884 1462 aaPredicted RBP9.45□□□□□ -0.9
RTL9-201ENST00000465301 ATAD2BQ9ULI0 1458 aa9.45□□□□□ -0.9
RTL9-201ENST00000465301 EXOC5O00471 708 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms