RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 TXNRD1Q16881 649 aa21.69■■□□□ 1.06
EXOSC3-203ENST00000465229 CHMP4AQ9BY43 222 aa21.69■■□□□ 1.06
EXOSC3-203ENST00000465229 SF3B2Q13435 895 aaKnown RBP21.68■■□□□ 1.06
EXOSC3-203ENST00000465229 ALDH1L2Q3SY69 923 aa21.68■■□□□ 1.06
EXOSC3-203ENST00000465229 SLC27A3Q5K4L6 730 aa21.68■■□□□ 1.06
EXOSC3-203ENST00000465229 CCDC125Q86Z20 511 aa21.68■■□□□ 1.06
EXOSC3-203ENST00000465229 TNS1Q9HBL0 1735 aaKnown RBP21.67■■□□□ 1.06
EXOSC3-203ENST00000465229 A1BGP04217 495 aa21.67■■□□□ 1.06
EXOSC3-203ENST00000465229 LINC00116Q8NCU8 138 aa21.67■■□□□ 1.06
EXOSC3-203ENST00000465229 BCL2L13Q9BXK5 485 aa21.67■■□□□ 1.06
EXOSC3-203ENST00000465229 BCAR3O75815 825 aa21.66■■□□□ 1.06
EXOSC3-203ENST00000465229 EN1Q05925 392 aaPredicted RBP21.66■■□□□ 1.06
EXOSC3-203ENST00000465229 PDIA6Q15084 440 aa21.66■■□□□ 1.06
EXOSC3-203ENST00000465229 CAMKK2Q96RR4 588 aa21.66■■□□□ 1.06
EXOSC3-203ENST00000465229 CHPF2Q9P2E5 772 aa21.66■■□□□ 1.06
EXOSC3-203ENST00000465229 C5P01031 1676 aa21.66■■□□□ 1.06
EXOSC3-203ENST00000465229 SMC4Q9NTJ3 1288 aa21.66■■□□□ 1.06
EXOSC3-203ENST00000465229 LY75O60449 1722 aa21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 NBPF26B4DH59 902 aa21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 SLC4A2P04920 1241 aa21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 PROSER3Q2NL68 480 aa21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 NBPF14Q5TI25 921 aa21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 NBPF10Q6P3W6 841 aaKnown RBP21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 MRPL50Q8N5N7 158 aaKnown RBP21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 NBPF15Q8N660 670 aa21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 STK31Q9BXU1 1019 aa21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 DBF4Q9UBU7 674 aaPredicted RBP21.65■■□□□ 1.06
EXOSC3-203ENST00000465229 ANXA1P04083 346 aa21.64■■□□□ 1.05
EXOSC3-203ENST00000465229 BAG6P46379 1132 aa21.64■■□□□ 1.05
EXOSC3-203ENST00000465229 PIP4K2AP48426 406 aaPredicted RBP21.64■■□□□ 1.05
EXOSC3-203ENST00000465229 INTS5Q6P9B9 1019 aaKnown RBP21.64■■□□□ 1.05
EXOSC3-203ENST00000465229 DEFB132Q7Z7B7 95 aa21.64■■□□□ 1.05
EXOSC3-203ENST00000465229 UPF1Q92900 1129 aaKnown RBP eCLIP21.64■■□□□ 1.05
EXOSC3-203ENST00000465229 DDX21Q9NR30 783 aaKnown RBP eCLIP21.64■■□□□ 1.05
EXOSC3-203ENST00000465229 ZNF831Q5JPB2 1677 aa21.63■■□□□ 1.05
EXOSC3-203ENST00000465229 CRKLP46109 303 aaKnown RBP21.63■■□□□ 1.05
EXOSC3-203ENST00000465229 EZH2Q15910 746 aaKnown RBP21.63■■□□□ 1.05
EXOSC3-203ENST00000465229 TJP1Q07157 1748 aa21.63■■□□□ 1.05
EXOSC3-203ENST00000465229 BRPF1P55201 1214 aaPredicted RBP21.62■■□□□ 1.05
EXOSC3-203ENST00000465229 ERBB4Q15303 1308 aa21.62■■□□□ 1.05
EXOSC3-203ENST00000465229 LRP10Q7Z4F1 713 aa21.62■■□□□ 1.05
EXOSC3-203ENST00000465229 CCDC87Q9NVE4 849 aa21.62■■□□□ 1.05
EXOSC3-203ENST00000465229 ZBTB1Q9Y2K1 713 aa21.62■■□□□ 1.05
EXOSC3-203ENST00000465229 CICQ96RK0 1608 aaPredicted RBP21.61■■□□□ 1.05
EXOSC3-203ENST00000465229 MYL6BP14649 208 aa21.61■■□□□ 1.05
EXOSC3-203ENST00000465229 RC3H1Q5TC82 1133 aaKnown RBP21.61■■□□□ 1.05
EXOSC3-203ENST00000465229 CANXP27824 592 aaKnown RBP21.6■■□□□ 1.05
EXOSC3-203ENST00000465229 G2E3Q7L622 706 aa21.6■■□□□ 1.05
EXOSC3-203ENST00000465229 HYPKQ9NX55 129 aa21.6■■□□□ 1.05
EXOSC3-203ENST00000465229 CNTNAP4Q9C0A0 1308 aa21.59■■□□□ 1.05
EXOSC3-203ENST00000465229 PHAXQ9H814 394 aaKnown RBP21.59■■□□□ 1.05
EXOSC3-203ENST00000465229 LAMB4A4D0S4 1761 aa21.59■■□□□ 1.05
EXOSC3-203ENST00000465229 HMGB2P26583 209 aaKnown RBP21.58■■□□□ 1.04
EXOSC3-203ENST00000465229 NOB1Q9ULX3 412 aaKnown RBP21.58■■□□□ 1.04
EXOSC3-203ENST00000465229 MYH14Q7Z406 1995 aaKnown RBP21.57■■□□□ 1.04
EXOSC3-203ENST00000465229 IL6STP40189 918 aaPredicted RBP21.57■■□□□ 1.04
EXOSC3-203ENST00000465229 TSHZ2Q9NRE2 1034 aa21.57■■□□□ 1.04
EXOSC3-203ENST00000465229 RGPD3A6NKT7 1758 aaPredicted RBP21.56■■□□□ 1.04
EXOSC3-203ENST00000465229 RGPD4Q7Z3J3 1758 aa21.56■■□□□ 1.04
EXOSC3-203ENST00000465229 COL5A3P25940 1745 aaPredicted RBP21.56■■□□□ 1.04
EXOSC3-203ENST00000465229 EIF5P55010 431 aaKnown RBP21.56■■□□□ 1.04
EXOSC3-203ENST00000465229 FLIIQ13045 1269 aa21.56■■□□□ 1.04
EXOSC3-203ENST00000465229 FRAT1Q92837 279 aaPredicted RBP21.56■■□□□ 1.04
EXOSC3-203ENST00000465229 RPS6KA4O75676 772 aa21.55■■□□□ 1.04
EXOSC3-203ENST00000465229 B4GALNT3Q6L9W6 998 aa21.55■■□□□ 1.04
EXOSC3-203ENST00000465229 COPS6Q7L5N1 327 aa21.55■■□□□ 1.04
EXOSC3-203ENST00000465229 XAGE3Q8WTP9 111 aa21.55■■□□□ 1.04
EXOSC3-203ENST00000465229 KIF16BQ96L93 1317 aa21.55■■□□□ 1.04
EXOSC3-203ENST00000465229 PLIN1O60240 522 aa21.55■■□□□ 1.04
EXOSC3-203ENST00000465229 AIMP1Q12904 312 aaKnown RBP21.55■■□□□ 1.04
EXOSC3-203ENST00000465229 ZNF330Q9Y3S2 320 aaPredicted RBP21.55■■□□□ 1.04
EXOSC3-203ENST00000465229 TAF1LQ8IZX4 1826 aa21.54■■□□□ 1.04
EXOSC3-203ENST00000465229 GNPATO15228 680 aa21.54■■□□□ 1.04
EXOSC3-203ENST00000465229 AMIGO3Q86WK7 504 aa21.54■■□□□ 1.04
EXOSC3-203ENST00000465229 AK7Q96M32 723 aa21.54■■□□□ 1.04
EXOSC3-203ENST00000465229 SMIM5Q71RC9 77 aa21.53■■□□□ 1.04
EXOSC3-203ENST00000465229 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.53■■□□□ 1.04
EXOSC3-203ENST00000465229 AKT1S1Q96B36 256 aa21.53■■□□□ 1.04
EXOSC3-203ENST00000465229 PTPRCP08575 1304 aa21.53■■□□□ 1.04
EXOSC3-203ENST00000465229 CACNA1FO60840 1977 aa21.52■■□□□ 1.04
EXOSC3-203ENST00000465229 IPO8O15397 1037 aaKnown RBP21.52■■□□□ 1.04
EXOSC3-203ENST00000465229 ZNF827Q17R98 1081 aa21.52■■□□□ 1.04
EXOSC3-203ENST00000465229 TTLL7Q6ZT98 887 aa21.52■■□□□ 1.04
EXOSC3-203ENST00000465229 ARHGAP45Q92619 1136 aa21.52■■□□□ 1.04
EXOSC3-203ENST00000465229 CCDC136Q96JN2 1154 aa21.52■■□□□ 1.04
EXOSC3-203ENST00000465229 RTCBQ9Y3I0 505 aaKnown RBP21.52■■□□□ 1.04
EXOSC3-203ENST00000465229 C4BP0C0L5 1744 aa21.52■■□□□ 1.04
EXOSC3-203ENST00000465229 FKBP5Q13451 457 aaPredicted RBP21.51■■□□□ 1.03
EXOSC3-203ENST00000465229 ZKSCAN2Q63HK3 967 aa21.51■■□□□ 1.03
EXOSC3-203ENST00000465229 RREB1Q92766 1687 aa21.51■■□□□ 1.03
EXOSC3-203ENST00000465229 ATF7IPQ6VMQ6 1270 aa21.51■■□□□ 1.03
EXOSC3-203ENST00000465229 NPM2Q86SE8 214 aaKnown RBP21.51■■□□□ 1.03
EXOSC3-203ENST00000465229 TRIM27P14373 513 aa21.5■■□□□ 1.03
EXOSC3-203ENST00000465229 ANKRD13DQ6ZTN6 518 aa21.5■■□□□ 1.03
EXOSC3-203ENST00000465229 TNNQ9UQP3 1299 aa21.5■■□□□ 1.03
EXOSC3-203ENST00000465229 PI4KAP2A4QPH2 592 aa21.49■■□□□ 1.03
EXOSC3-203ENST00000465229 PI4KAP1Q8N8J0 262 aa21.49■■□□□ 1.03
EXOSC3-203ENST00000465229 EXOC6Q8TAG9 804 aa21.49■■□□□ 1.03
EXOSC3-203ENST00000465229 ANO8Q9HCE9 1232 aaPredicted RBP21.49■■□□□ 1.03
EXOSC3-203ENST00000465229 TBC1D2BQ9UPU7 963 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms