RNA–Protein interactions for RNA: ENST00000464553.2

SSNA1-204, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSNA1, Length 723 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-204ENST00000464553 DCTN1Q14203 1278 aa21.46■■□□□ 1.03
SSNA1-204ENST00000464553 KLHL34Q8N239 644 aa21.46■■□□□ 1.03
SSNA1-204ENST00000464553 BABAM1Q9NWV8 329 aa21.46■■□□□ 1.03
SSNA1-204ENST00000464553 NARFQ9UHQ1 456 aa21.46■■□□□ 1.03
SSNA1-204ENST00000464553 EIF5P55010 431 aaKnown RBP21.45■■□□□ 1.02
SSNA1-204ENST00000464553 RUNDC1Q96C34 613 aa21.45■■□□□ 1.02
SSNA1-204ENST00000464553 ZBTB1Q9Y2K1 713 aa21.45■■□□□ 1.02
SSNA1-204ENST00000464553 IL6STP40189 918 aaPredicted RBP21.44■■□□□ 1.02
SSNA1-204ENST00000464553 RIPK4P57078 832 aa21.44■■□□□ 1.02
SSNA1-204ENST00000464553 PARP3Q9Y6F1 533 aa21.44■■□□□ 1.02
SSNA1-204ENST00000464553 KCNQ3O43525 872 aa21.43■■□□□ 1.02
SSNA1-204ENST00000464553 TMPOP42166 694 aaKnown RBP21.43■■□□□ 1.02
SSNA1-204ENST00000464553 GPR162Q16538 588 aa21.43■■□□□ 1.02
SSNA1-204ENST00000464553 NPM2Q86SE8 214 aaKnown RBP21.43■■□□□ 1.02
SSNA1-204ENST00000464553 ADAMTS8Q9UP79 889 aa21.43■■□□□ 1.02
SSNA1-204ENST00000464553 GRIN3BO60391 1043 aa21.42■■□□□ 1.02
SSNA1-204ENST00000464553 TM4SF1P30408 202 aa21.42■■□□□ 1.02
SSNA1-204ENST00000464553 COL15A1P39059 1388 aa21.42■■□□□ 1.02
SSNA1-204ENST00000464553 TGFB2P61812 414 aa21.42■■□□□ 1.02
SSNA1-204ENST00000464553 NLGN2Q8NFZ4 835 aa21.42■■□□□ 1.02
SSNA1-204ENST00000464553 CANXP27824 592 aaKnown RBP21.41■■□□□ 1.02
SSNA1-204ENST00000464553 SRP68Q9UHB9 627 aaKnown RBP21.41■■□□□ 1.02
SSNA1-204ENST00000464553 FKBP8Q14318 412 aa21.4■■□□□ 1.02
SSNA1-204ENST00000464553 USPL1Q5W0Q7 1092 aa21.4■■□□□ 1.02
SSNA1-204ENST00000464553 USP16Q9Y5T5 823 aa21.4■■□□□ 1.02
SSNA1-204ENST00000464553 RGL2O15211 777 aa21.38■■□□□ 1.01
SSNA1-204ENST00000464553 A1BGP04217 495 aa21.37■■□□□ 1.01
SSNA1-204ENST00000464553 EIF4A1P60842 406 aaKnown RBP21.37■■□□□ 1.01
SSNA1-204ENST00000464553 ANP32CO43423 234 aa21.36■■□□□ 1.01
SSNA1-204ENST00000464553 YY1P25490 414 aa21.36■■□□□ 1.01
SSNA1-204ENST00000464553 MIS18AQ9NYP9 233 aa21.36■■□□□ 1.01
SSNA1-204ENST00000464553 GIGYF1O75420 1035 aaPredicted RBP21.35■■□□□ 1.01
SSNA1-204ENST00000464553 C4AP0C0L4 1744 aa21.35■■□□□ 1.01
SSNA1-204ENST00000464553 DLG5Q8TDM6 1919 aa21.34■■□□□ 1.01
SSNA1-204ENST00000464553 POLRMTO00411 1230 aaKnown RBP21.34■■□□□ 1.01
SSNA1-204ENST00000464553 CLEC4GQ6UXB4 293 aa21.34■■□□□ 1.01
SSNA1-204ENST00000464553 CCDC146Q8IYE0 955 aa21.34■■□□□ 1.01
SSNA1-204ENST00000464553 THUMPD2Q9BTF0 503 aaKnown RBP21.34■■□□□ 1.01
SSNA1-204ENST00000464553 BCL2L12Q9HB09 334 aa21.34■■□□□ 1.01
SSNA1-204ENST00000464553 C10orf71Q711Q0 1435 aa21.33■■□□□ 1.01
SSNA1-204ENST00000464553 DDR1Q08345 913 aa21.33■■□□□ 1.01
SSNA1-204ENST00000464553 NFIXQ14938 502 aa21.33■■□□□ 1.01
SSNA1-204ENST00000464553 PELP1Q8IZL8 1130 aaKnown RBP21.32■■□□□ 1
SSNA1-204ENST00000464553 TSPYL4Q9UJ04 414 aa21.32■■□□□ 1
SSNA1-204ENST00000464553 TRIM35Q9UPQ4 493 aa21.32■■□□□ 1
SSNA1-204ENST00000464553 PRAMEF22A3QJZ6 481 aa21.31■■□□□ 1
SSNA1-204ENST00000464553 YBX3P16989 372 aaKnown RBP eCLIP21.31■■□□□ 13e-6■□□□□ 9.7
SSNA1-204ENST00000464553 NEUROD2Q15784 382 aa21.31■■□□□ 1
SSNA1-204ENST00000464553 DZIP3Q86Y13 1208 aaKnown RBP21.31■■□□□ 1
SSNA1-204ENST00000464553 TBC1D2BQ9UPU7 963 aa21.31■■□□□ 1
SSNA1-204ENST00000464553 ERBB4Q15303 1308 aa21.3■■□□□ 1
SSNA1-204ENST00000464553 CHL1O00533 1208 aa21.3■■□□□ 1
SSNA1-204ENST00000464553 CAMTA2O94983 1202 aa21.3■■□□□ 1
SSNA1-204ENST00000464553 SERPINB2P05120 415 aa21.3■■□□□ 1
SSNA1-204ENST00000464553 NBPF26B4DH59 902 aa21.29■■□□□ 1
SSNA1-204ENST00000464553 CALD1Q05682 793 aaKnown RBP21.29■■□□□ 1
SSNA1-204ENST00000464553 NCBP3Q53F19 620 aaKnown RBP21.29■■□□□ 1
SSNA1-204ENST00000464553 NBPF10Q6P3W6 841 aaKnown RBP21.29■■□□□ 1
SSNA1-204ENST00000464553 NBPF15Q8N660 670 aa21.29■■□□□ 1
SSNA1-204ENST00000464553 ZNF652Q9Y2D9 606 aa21.29■■□□□ 1
SSNA1-204ENST00000464553 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
SSNA1-204ENST00000464553 ZNF330Q9Y3S2 320 aaPredicted RBP21.29■■□□□ 1
SSNA1-204ENST00000464553 KIF13BQ9NQT8 1826 aa21.28■■□□□ 1
SSNA1-204ENST00000464553 PDZRN3Q9UPQ7 1066 aa21.28■■□□□ 1
SSNA1-204ENST00000464553 A0A0G2JLW4 131 aa21.27■■□□□ 1
SSNA1-204ENST00000464553 CFAP44Q96MT7 982 aa21.27■■□□□ 1
SSNA1-204ENST00000464553 SETDB2Q96T68 719 aa21.27■■□□□ 1
SSNA1-204ENST00000464553 KDM3BQ7LBC6 1761 aa21.27■■□□□ 1
SSNA1-204ENST00000464553 PXDNLA1KZ92 1463 aa21.26■□□□□ 0.99
SSNA1-204ENST00000464553 APAF1O14727 1248 aa21.26■□□□□ 0.99
SSNA1-204ENST00000464553 PIM2Q9P1W9 311 aa21.26■□□□□ 0.99
SSNA1-204ENST00000464553 ERVV-1B6SEH8 477 aa21.25■□□□□ 0.99
SSNA1-204ENST00000464553 DPEP1P16444 411 aa21.25■□□□□ 0.99
SSNA1-204ENST00000464553 KCNA3P22001 575 aa21.25■□□□□ 0.99
SSNA1-204ENST00000464553 TBC1D9BQ66K14 1250 aa21.25■□□□□ 0.99
SSNA1-204ENST00000464553 CARMIL3Q8ND23 1372 aa21.24■□□□□ 0.99
SSNA1-204ENST00000464553 HOXB7P09629 217 aa21.24■□□□□ 0.99
SSNA1-204ENST00000464553 BRIP1Q9BX63 1249 aa21.23■□□□□ 0.99
SSNA1-204ENST00000464553 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
SSNA1-204ENST00000464553 PIP4K2AP48426 406 aaPredicted RBP21.22■□□□□ 0.99
SSNA1-204ENST00000464553 CCDC27Q2M243 656 aa21.22■□□□□ 0.99
SSNA1-204ENST00000464553 CCDC184Q52MB2 194 aa21.22■□□□□ 0.99
SSNA1-204ENST00000464553 BICDL1Q6ZP65 573 aa21.22■□□□□ 0.99
SSNA1-204ENST00000464553 ZNF853P0CG23 659 aa21.21■□□□□ 0.99
SSNA1-204ENST00000464553 PDE6BP35913 854 aa21.21■□□□□ 0.99
SSNA1-204ENST00000464553 GNAI1P63096 354 aa21.21■□□□□ 0.99
SSNA1-204ENST00000464553 CHMP4AQ9BY43 222 aa21.21■□□□□ 0.99
SSNA1-204ENST00000464553 IFT57Q9NWB7 429 aa21.21■□□□□ 0.99
SSNA1-204ENST00000464553 NRXN2Q9P2S2 1712 aa21.21■□□□□ 0.99
SSNA1-204ENST00000464553 CHD4Q14839 1912 aa21.2■□□□□ 0.98
SSNA1-204ENST00000464553 DALRD3Q5D0E6 543 aaKnown RBP21.2■□□□□ 0.98
SSNA1-204ENST00000464553 BCS1LQ9Y276 419 aa21.2■□□□□ 0.98
SSNA1-204ENST00000464553 H0YIN7 160 aa21.19■□□□□ 0.98
SSNA1-204ENST00000464553 TPTE2Q6XPS3 522 aa21.19■□□□□ 0.98
SSNA1-204ENST00000464553 KIF6Q6ZMV9 814 aa21.19■□□□□ 0.98
SSNA1-204ENST00000464553 LAS1LQ9Y4W2 734 aaKnown RBP21.19■□□□□ 0.98
SSNA1-204ENST00000464553 SCN7AQ01118 1682 aa21.18■□□□□ 0.98
SSNA1-204ENST00000464553 LAMB4A4D0S4 1761 aa21.18■□□□□ 0.98
SSNA1-204ENST00000464553 PRR5LQ6MZQ0 368 aa21.18■□□□□ 0.98
SSNA1-204ENST00000464553 CNBD1Q8NA66 436 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms