RNA–Protein interactions for RNA: ENST00000464422.1

NR1I3-212, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 3

Gene NR1I3, Length 480 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-212ENST00000464422 CFAP53Q96M91 514 aa16.73■□□□□ 0.27
NR1I3-212ENST00000464422 ZNF496Q96IT1 587 aaPredicted RBP16.72■□□□□ 0.27
NR1I3-212ENST00000464422 HEG1Q9ULI3 1381 aa16.72■□□□□ 0.27
NR1I3-212ENST00000464422 TM4SF1P30408 202 aa16.71■□□□□ 0.27
NR1I3-212ENST00000464422 ZNF790Q6PG37 636 aa16.71■□□□□ 0.27
NR1I3-212ENST00000464422 BCL2L12Q9HB09 334 aa16.71■□□□□ 0.27
NR1I3-212ENST00000464422 ATP10DQ9P241 1426 aa16.7■□□□□ 0.26
NR1I3-212ENST00000464422 COL11A2P13942 1736 aaPredicted RBP16.7■□□□□ 0.26
NR1I3-212ENST00000464422 SBF1O95248 1867 aa16.7■□□□□ 0.26
NR1I3-212ENST00000464422 KCNA3P22001 575 aa16.7■□□□□ 0.26
NR1I3-212ENST00000464422 TGFB2P61812 414 aa16.7■□□□□ 0.26
NR1I3-212ENST00000464422 USPL1Q5W0Q7 1092 aa16.7■□□□□ 0.26
NR1I3-212ENST00000464422 A0A0G2JLW4 131 aa16.69■□□□□ 0.26
NR1I3-212ENST00000464422 POLRMTO00411 1230 aaKnown RBP16.69■□□□□ 0.26
NR1I3-212ENST00000464422 KCNQ3O43525 872 aa16.69■□□□□ 0.26
NR1I3-212ENST00000464422 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
NR1I3-212ENST00000464422 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
NR1I3-212ENST00000464422 TEFQ10587 303 aa16.69■□□□□ 0.26
NR1I3-212ENST00000464422 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
NR1I3-212ENST00000464422 DPEP1P16444 411 aa16.68■□□□□ 0.26
NR1I3-212ENST00000464422 NARFQ9UHQ1 456 aa16.68■□□□□ 0.26
NR1I3-212ENST00000464422 NUDCQ9Y266 331 aa16.68■□□□□ 0.26
NR1I3-212ENST00000464422 FCHSD2O94868 740 aa16.67■□□□□ 0.26
NR1I3-212ENST00000464422 EIF5P55010 431 aaKnown RBP16.67■□□□□ 0.26
NR1I3-212ENST00000464422 TTC5Q8N0Z6 440 aa16.67■□□□□ 0.26
NR1I3-212ENST00000464422 MCM10Q7L590 875 aa16.66■□□□□ 0.26
NR1I3-212ENST00000464422 CARMIL3Q8ND23 1372 aa16.65■□□□□ 0.26
NR1I3-212ENST00000464422 CACNA1SQ13698 1873 aa16.65■□□□□ 0.26
NR1I3-212ENST00000464422 CANXP27824 592 aaKnown RBP16.65■□□□□ 0.26
NR1I3-212ENST00000464422 DCTN1Q14203 1278 aa16.65■□□□□ 0.26
NR1I3-212ENST00000464422 NFIXQ14938 502 aa16.65■□□□□ 0.26
NR1I3-212ENST00000464422 ZPR1O75312 459 aa16.64■□□□□ 0.25
NR1I3-212ENST00000464422 C1QTNF8P60827 252 aa16.64■□□□□ 0.25
NR1I3-212ENST00000464422 PLEKHF1Q96S99 279 aa16.64■□□□□ 0.25
NR1I3-212ENST00000464422 ARFGEF2Q9Y6D5 1785 aa16.64■□□□□ 0.25
NR1I3-212ENST00000464422 CCDC88AQ3V6T2 1871 aa16.63■□□□□ 0.25
NR1I3-212ENST00000464422 PRAMEF22A3QJZ6 481 aa16.63■□□□□ 0.25
NR1I3-212ENST00000464422 BTBD11A6QL63 1104 aa16.63■□□□□ 0.25
NR1I3-212ENST00000464422 STARD3NLO95772 234 aa16.63■□□□□ 0.25
NR1I3-212ENST00000464422 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
NR1I3-212ENST00000464422 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
NR1I3-212ENST00000464422 CHRNA5P30532 468 aa16.62■□□□□ 0.25
NR1I3-212ENST00000464422 GIGYF1O75420 1035 aaPredicted RBP16.61■□□□□ 0.25
NR1I3-212ENST00000464422 A1BGP04217 495 aa16.61■□□□□ 0.25
NR1I3-212ENST00000464422 TEX13AQ9BXU3 409 aaPredicted RBP16.61■□□□□ 0.25
NR1I3-212ENST00000464422 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
NR1I3-212ENST00000464422 TIAM2Q8IVF5 1701 aa16.6■□□□□ 0.25
NR1I3-212ENST00000464422 HTATSF1O43719 755 aaKnown RBP16.6■□□□□ 0.25
NR1I3-212ENST00000464422 IL6STP40189 918 aaPredicted RBP16.6■□□□□ 0.25
NR1I3-212ENST00000464422 NUP98P52948 1817 aa16.59■□□□□ 0.25
NR1I3-212ENST00000464422 SERPINB2P05120 415 aa16.59■□□□□ 0.25
NR1I3-212ENST00000464422 TBC1D9BQ66K14 1250 aa16.59■□□□□ 0.25
NR1I3-212ENST00000464422 PIM2Q9P1W9 311 aa16.59■□□□□ 0.25
NR1I3-212ENST00000464422 FER1L6Q2WGJ9 1857 aa16.59■□□□□ 0.25
NR1I3-212ENST00000464422 CAMTA2O94983 1202 aa16.58■□□□□ 0.24
NR1I3-212ENST00000464422 PIP4K2AP48426 406 aaPredicted RBP16.58■□□□□ 0.24
NR1I3-212ENST00000464422 RTF1Q92541 710 aaKnown RBP16.58■□□□□ 0.24
NR1I3-212ENST00000464422 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
NR1I3-212ENST00000464422 A0A087WZG4 1122 aa16.57■□□□□ 0.24
NR1I3-212ENST00000464422 DICER1Q9UPY3 1922 aaKnown RBP16.57■□□□□ 0.24
NR1I3-212ENST00000464422 NBPF26B4DH59 902 aa16.56■□□□□ 0.24
NR1I3-212ENST00000464422 NFE2L2Q16236 605 aa16.56■□□□□ 0.24
NR1I3-212ENST00000464422 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
NR1I3-212ENST00000464422 NBPF15Q8N660 670 aa16.56■□□□□ 0.24
NR1I3-212ENST00000464422 ZNF526Q8TF50 670 aaPredicted RBP16.56■□□□□ 0.24
NR1I3-212ENST00000464422 TNRC6CQ9HCJ0 1690 aaKnown RBP16.56■□□□□ 0.24
NR1I3-212ENST00000464422 SLX4Q8IY92 1834 aa16.55■□□□□ 0.24
NR1I3-212ENST00000464422 SNRPA1P09661 255 aaKnown RBP16.55■□□□□ 0.24
NR1I3-212ENST00000464422 TAF7Q15545 349 aaPredicted RBP16.55■□□□□ 0.24
NR1I3-212ENST00000464422 DALRD3Q5D0E6 543 aaKnown RBP16.55■□□□□ 0.24
NR1I3-212ENST00000464422 BICDL1Q6ZP65 573 aa16.55■□□□□ 0.24
NR1I3-212ENST00000464422 ARHGAP27Q6ZUM4 889 aa16.55■□□□□ 0.24
NR1I3-212ENST00000464422 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
NR1I3-212ENST00000464422 GPBP1L1Q9HC44 474 aaPredicted RBP16.55■□□□□ 0.24
NR1I3-212ENST00000464422 MIS18AQ9NYP9 233 aa16.55■□□□□ 0.24
NR1I3-212ENST00000464422 ZNF330Q9Y3S2 320 aaPredicted RBP16.55■□□□□ 0.24
NR1I3-212ENST00000464422 KIF3CO14782 793 aa16.54■□□□□ 0.24
NR1I3-212ENST00000464422 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
NR1I3-212ENST00000464422 RALBP1Q15311 655 aa16.54■□□□□ 0.24
NR1I3-212ENST00000464422 PRR5LQ6MZQ0 368 aa16.54■□□□□ 0.24
NR1I3-212ENST00000464422 DZIP3Q86Y13 1208 aaKnown RBP16.53■□□□□ 0.24
NR1I3-212ENST00000464422 SENP3-EIF4A1A0A087X0R7 540 aa16.52■□□□□ 0.24
NR1I3-212ENST00000464422 PRELPP51888 382 aa16.52■□□□□ 0.24
NR1I3-212ENST00000464422 MYBBP1AQ9BQG0 1328 aaKnown RBP16.51■□□□□ 0.23
NR1I3-212ENST00000464422 C9orf131Q5VYM1 1079 aa16.51■□□□□ 0.23
NR1I3-212ENST00000464422 C2CD5Q86YS7 1000 aa16.51■□□□□ 0.23
NR1I3-212ENST00000464422 CCDC24Q8N4L8 307 aa16.51■□□□□ 0.23
NR1I3-212ENST00000464422 CEP350Q5VT06 3117 aa16.51■□□□□ 0.23
NR1I3-212ENST00000464422 ANKRD36CQ5JPF3 1778 aa16.51■□□□□ 0.23
NR1I3-212ENST00000464422 EIF4A1P60842 406 aaKnown RBP16.5■□□□□ 0.23
NR1I3-212ENST00000464422 RASSF7Q02833 373 aa16.5■□□□□ 0.23
NR1I3-212ENST00000464422 BRIP1Q9BX63 1249 aa16.49■□□□□ 0.23
NR1I3-212ENST00000464422 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
NR1I3-212ENST00000464422 NEFMP07197 916 aa16.48■□□□□ 0.23
NR1I3-212ENST00000464422 CLEC4GQ6UXB4 293 aa16.48■□□□□ 0.23
NR1I3-212ENST00000464422 H0YIN7 160 aa16.47■□□□□ 0.23
NR1I3-212ENST00000464422 NFKBIEO00221 500 aa16.47■□□□□ 0.23
NR1I3-212ENST00000464422 HLFQ16534 295 aa16.47■□□□□ 0.23
NR1I3-212ENST00000464422 TTLL6Q8N841 843 aa16.47■□□□□ 0.23
NR1I3-212ENST00000464422 CNBD1Q8NA66 436 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms