RNA–Protein interactions for RNA: ENST00000464323.1

TFAP2A-206, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 2

Gene TFAP2A, Length 1,387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-206ENST00000464323 INTS5Q6P9B9 1019 aaKnown RBP19.75■□□□□ 0.75
TFAP2A-206ENST00000464323 VSIG10Q8N0Z9 540 aa19.75■□□□□ 0.75
TFAP2A-206ENST00000464323 KIAA1551Q9HCM1 1747 aa19.75■□□□□ 0.75
TFAP2A-206ENST00000464323 GPR162Q16538 588 aa19.74■□□□□ 0.75
TFAP2A-206ENST00000464323 FMNL2Q96PY5 1086 aa19.74■□□□□ 0.75
TFAP2A-206ENST00000464323 YBX3P16989 372 aaKnown RBP eCLIP19.73■□□□□ 0.75
TFAP2A-206ENST00000464323 TMPOP42166 694 aaKnown RBP19.73■□□□□ 0.75
TFAP2A-206ENST00000464323 RUNDC1Q96C34 613 aa19.73■□□□□ 0.75
TFAP2A-206ENST00000464323 THUMPD2Q9BTF0 503 aaKnown RBP19.73■□□□□ 0.75
TFAP2A-206ENST00000464323 CCDC87Q9NVE4 849 aa19.73■□□□□ 0.75
TFAP2A-206ENST00000464323 RRP7AQ9Y3A4 280 aaKnown RBP19.73■□□□□ 0.75
TFAP2A-206ENST00000464323 STARD3NLO95772 234 aa19.72■□□□□ 0.75
TFAP2A-206ENST00000464323 CCDC184Q52MB2 194 aa19.72■□□□□ 0.75
TFAP2A-206ENST00000464323 TEX13AQ9BXU3 409 aaPredicted RBP19.72■□□□□ 0.75
TFAP2A-206ENST00000464323 GYS1P13807 737 aa19.71■□□□□ 0.75
TFAP2A-206ENST00000464323 MMP10P09238 476 aa19.7■□□□□ 0.74
TFAP2A-206ENST00000464323 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
TFAP2A-206ENST00000464323 NLGN1Q8N2Q7 840 aa19.7■□□□□ 0.74
TFAP2A-206ENST00000464323 HEG1Q9ULI3 1381 aa19.69■□□□□ 0.74
TFAP2A-206ENST00000464323 C10orf71Q711Q0 1435 aa19.69■□□□□ 0.74
TFAP2A-206ENST00000464323 PELP1Q8IZL8 1130 aaKnown RBP19.69■□□□□ 0.74
TFAP2A-206ENST00000464323 PNISRQ8TF01 805 aaKnown RBP19.69■□□□□ 0.74
TFAP2A-206ENST00000464323 ZBTB1Q9Y2K1 713 aa19.69■□□□□ 0.74
TFAP2A-206ENST00000464323 USP16Q9Y5T5 823 aa19.69■□□□□ 0.74
TFAP2A-206ENST00000464323 ZNF784Q8NCA9 323 aaPredicted RBP19.68■□□□□ 0.74
TFAP2A-206ENST00000464323 SRP68Q9UHB9 627 aaKnown RBP19.68■□□□□ 0.74
TFAP2A-206ENST00000464323 USP42Q9H9J4 1324 aaKnown RBP19.67■□□□□ 0.74
TFAP2A-206ENST00000464323 ZPR1O75312 459 aa19.67■□□□□ 0.74
TFAP2A-206ENST00000464323 A1BGP04217 495 aa19.67■□□□□ 0.74
TFAP2A-206ENST00000464323 SNRPA1P09661 255 aaKnown RBP19.67■□□□□ 0.74
TFAP2A-206ENST00000464323 SOS1Q07889 1333 aaPredicted RBP19.67■□□□□ 0.74
TFAP2A-206ENST00000464323 PXDNLA1KZ92 1463 aa19.66■□□□□ 0.74
TFAP2A-206ENST00000464323 PRAMEF22A3QJZ6 481 aa19.66■□□□□ 0.74
TFAP2A-206ENST00000464323 GRIN3BO60391 1043 aa19.66■□□□□ 0.74
TFAP2A-206ENST00000464323 LMOD3Q0VAK6 560 aa19.66■□□□□ 0.74
TFAP2A-206ENST00000464323 N4BP2Q86UW6 1770 aaPredicted RBP19.66■□□□□ 0.74
TFAP2A-206ENST00000464323 BRCA1P38398 1863 aaKnown RBP19.65■□□□□ 0.74
TFAP2A-206ENST00000464323 MRS2Q9HD23 443 aa19.65■□□□□ 0.74
TFAP2A-206ENST00000464323 ZNF330Q9Y3S2 320 aaPredicted RBP19.65■□□□□ 0.74
TFAP2A-206ENST00000464323 USPL1Q5W0Q7 1092 aa19.64■□□□□ 0.73
TFAP2A-206ENST00000464323 APAF1O14727 1248 aa19.63■□□□□ 0.73
TFAP2A-206ENST00000464323 FKBP8Q14318 412 aa19.63■□□□□ 0.73
TFAP2A-206ENST00000464323 NPM2Q86SE8 214 aaKnown RBP19.63■□□□□ 0.73
TFAP2A-206ENST00000464323 TRIM35Q9UPQ4 493 aa19.63■□□□□ 0.73
TFAP2A-206ENST00000464323 LAS1LQ9Y4W2 734 aaKnown RBP19.63■□□□□ 0.73
TFAP2A-206ENST00000464323 COL15A1P39059 1388 aa19.62■□□□□ 0.73
TFAP2A-206ENST00000464323 EIF5P55010 431 aaKnown RBP19.62■□□□□ 0.73
TFAP2A-206ENST00000464323 TSPYL4Q9UJ04 414 aa19.62■□□□□ 0.73
TFAP2A-206ENST00000464323 DLG5Q8TDM6 1919 aa19.62■□□□□ 0.73
TFAP2A-206ENST00000464323 A0A087WZG4 1122 aa19.61■□□□□ 0.73
TFAP2A-206ENST00000464323 PIP4K2AP48426 406 aaPredicted RBP19.61■□□□□ 0.73
TFAP2A-206ENST00000464323 EIF4A1P60842 406 aaKnown RBP19.61■□□□□ 0.73
TFAP2A-206ENST00000464323 DDR1Q08345 913 aa19.61■□□□□ 0.73
TFAP2A-206ENST00000464323 NARFQ9UHQ1 456 aa19.61■□□□□ 0.73
TFAP2A-206ENST00000464323 PARP3Q9Y6F1 533 aa19.61■□□□□ 0.73
TFAP2A-206ENST00000464323 TBC1D2BQ9UPU7 963 aa19.6■□□□□ 0.73
TFAP2A-206ENST00000464323 NRXN2Q9P2S2 1712 aa19.6■□□□□ 0.73
TFAP2A-206ENST00000464323 AFDNP55196 1824 aaKnown RBP19.6■□□□□ 0.73
TFAP2A-206ENST00000464323 SENP3-EIF4A1A0A087X0R7 540 aa19.59■□□□□ 0.73
TFAP2A-206ENST00000464323 IL6STP40189 918 aaPredicted RBP19.59■□□□□ 0.73
TFAP2A-206ENST00000464323 TGFB2P61812 414 aa19.59■□□□□ 0.73
TFAP2A-206ENST00000464323 SCN7AQ01118 1682 aa19.59■□□□□ 0.73
TFAP2A-206ENST00000464323 GIGYF1O75420 1035 aaPredicted RBP19.58■□□□□ 0.73
TFAP2A-206ENST00000464323 TM4SF1P30408 202 aa19.58■□□□□ 0.73
TFAP2A-206ENST00000464323 BCL2L12Q9HB09 334 aa19.58■□□□□ 0.73
TFAP2A-206ENST00000464323 BABAM1Q9NWV8 329 aa19.57■□□□□ 0.72
TFAP2A-206ENST00000464323 WWC3Q9ULE0 1092 aa19.57■□□□□ 0.72
TFAP2A-206ENST00000464323 ADCY9O60503 1353 aa19.57■□□□□ 0.72
TFAP2A-206ENST00000464323 POLRMTO00411 1230 aaKnown RBP19.57■□□□□ 0.72
TFAP2A-206ENST00000464323 ARFGEF1Q9Y6D6 1849 aa19.56■□□□□ 0.72
TFAP2A-206ENST00000464323 BICDL1Q6ZP65 573 aa19.56■□□□□ 0.72
TFAP2A-206ENST00000464323 NGEFQ8N5V2 710 aa19.56■□□□□ 0.72
TFAP2A-206ENST00000464323 A0A0G2JLW4 131 aa19.55■□□□□ 0.72
TFAP2A-206ENST00000464323 NBPF26B4DH59 902 aa19.55■□□□□ 0.72
TFAP2A-206ENST00000464323 CHL1O00533 1208 aa19.55■□□□□ 0.72
TFAP2A-206ENST00000464323 EIF2S2P20042 333 aaKnown RBP19.55■□□□□ 0.72
TFAP2A-206ENST00000464323 KCNA3P22001 575 aa19.55■□□□□ 0.72
TFAP2A-206ENST00000464323 NBPF10Q6P3W6 841 aaKnown RBP19.55■□□□□ 0.72
TFAP2A-206ENST00000464323 NBPF15Q8N660 670 aa19.55■□□□□ 0.72
TFAP2A-206ENST00000464323 DPEP1P16444 411 aa19.54■□□□□ 0.72
TFAP2A-206ENST00000464323 NFIXQ14938 502 aa19.54■□□□□ 0.72
TFAP2A-206ENST00000464323 DZIP3Q86Y13 1208 aaKnown RBP19.54■□□□□ 0.72
TFAP2A-206ENST00000464323 KDM3BQ7LBC6 1761 aa19.54■□□□□ 0.72
TFAP2A-206ENST00000464323 BCORQ6W2J9 1755 aa19.53■□□□□ 0.72
TFAP2A-206ENST00000464323 FAM9BQ8IZU0 186 aa19.53■□□□□ 0.72
TFAP2A-206ENST00000464323 DLEC1Q9Y238 1755 aa19.52■□□□□ 0.71
TFAP2A-206ENST00000464323 ATP10DQ9P241 1426 aa19.51■□□□□ 0.71
TFAP2A-206ENST00000464323 SERPINB2P05120 415 aa19.51■□□□□ 0.71
TFAP2A-206ENST00000464323 MYL6BP14649 208 aa19.51■□□□□ 0.71
TFAP2A-206ENST00000464323 TBC1D9BQ66K14 1250 aa19.51■□□□□ 0.71
TFAP2A-206ENST00000464323 NECTIN2Q92692 538 aa19.51■□□□□ 0.71
TFAP2A-206ENST00000464323 CFAP44Q96MT7 982 aa19.51■□□□□ 0.71
TFAP2A-206ENST00000464323 SALL2Q9Y467 1007 aaPredicted RBP19.51■□□□□ 0.71
TFAP2A-206ENST00000464323 LAMB4A4D0S4 1761 aa19.5■□□□□ 0.71
TFAP2A-206ENST00000464323 CAMTA2O94983 1202 aa19.5■□□□□ 0.71
TFAP2A-206ENST00000464323 CALD1Q05682 793 aaKnown RBP19.49■□□□□ 0.71
TFAP2A-206ENST00000464323 KRT24Q2M2I5 525 aa19.49■□□□□ 0.71
TFAP2A-206ENST00000464323 BCS1LQ9Y276 419 aa19.49■□□□□ 0.71
TFAP2A-206ENST00000464323 SETDB2Q96T68 719 aa19.48■□□□□ 0.71
TFAP2A-206ENST00000464323 ANKRD31Q8N7Z5 1873 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms