RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 G2E3Q7L622 706 aa18.29■□□□□ 0.52
COL5A1-205ENST00000464187 ZBTB40Q9NUA8 1239 aa18.29■□□□□ 0.52
COL5A1-205ENST00000464187 A0A0G2JS52 829 aa18.28■□□□□ 0.52
COL5A1-205ENST00000464187 PIGBQ92521 554 aa18.28■□□□□ 0.52
COL5A1-205ENST00000464187 DDRGK1Q96HY6 314 aa18.28■□□□□ 0.52
COL5A1-205ENST00000464187 TRPC5Q9UL62 973 aaPredicted RBP18.28■□□□□ 0.52
COL5A1-205ENST00000464187 ABCC4O15439 1325 aa18.28■□□□□ 0.52
COL5A1-205ENST00000464187 SNRPA1P09661 255 aaKnown RBP18.28■□□□□ 0.52
COL5A1-205ENST00000464187 CHPF2Q9P2E5 772 aa18.28■□□□□ 0.52
COL5A1-205ENST00000464187 FLIIQ13045 1269 aa18.27■□□□□ 0.52
COL5A1-205ENST00000464187 SYTL4Q96C24 671 aaPredicted RBP18.27■□□□□ 0.52
COL5A1-205ENST00000464187 ATRNO75882 1429 aa18.27■□□□□ 0.51
COL5A1-205ENST00000464187 DBF4Q9UBU7 674 aaPredicted RBP18.26■□□□□ 0.51
COL5A1-205ENST00000464187 RGS12O14924 1447 aa18.26■□□□□ 0.51
COL5A1-205ENST00000464187 BCL9O00512 1426 aa18.25■□□□□ 0.51
COL5A1-205ENST00000464187 PTCD1O75127 700 aaKnown RBP18.25■□□□□ 0.51
COL5A1-205ENST00000464187 PRIM1P49642 420 aaKnown RBP18.25■□□□□ 0.51
COL5A1-205ENST00000464187 FKBP5Q13451 457 aaPredicted RBP18.25■□□□□ 0.51
COL5A1-205ENST00000464187 PHAXQ9H814 394 aaKnown RBP18.25■□□□□ 0.51
COL5A1-205ENST00000464187 ASAP1Q9ULH1 1129 aa18.25■□□□□ 0.51
COL5A1-205ENST00000464187 ANXA1P04083 346 aa18.24■□□□□ 0.51
COL5A1-205ENST00000464187 QTRT2Q9H974 415 aaKnown RBP18.24■□□□□ 0.51
COL5A1-205ENST00000464187 USP16Q9Y5T5 823 aa18.24■□□□□ 0.51
COL5A1-205ENST00000464187 GLI3P10071 1580 aa18.24■□□□□ 0.51
COL5A1-205ENST00000464187 ACSBG1Q96GR2 724 aa18.23■□□□□ 0.51
COL5A1-205ENST00000464187 ATG3Q9NT62 314 aa18.23■□□□□ 0.51
COL5A1-205ENST00000464187 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
COL5A1-205ENST00000464187 PAPPAQ13219 1627 aa18.22■□□□□ 0.51
COL5A1-205ENST00000464187 F6X3S4 739 aa18.22■□□□□ 0.51
COL5A1-205ENST00000464187 ONECUT3O60422 494 aaPredicted RBP18.22■□□□□ 0.51
COL5A1-205ENST00000464187 PROSER3Q2NL68 480 aa18.22■□□□□ 0.51
COL5A1-205ENST00000464187 SMC5Q8IY18 1101 aa18.22■□□□□ 0.51
COL5A1-205ENST00000464187 INTS3Q68E01 1043 aaKnown RBP18.21■□□□□ 0.51
COL5A1-205ENST00000464187 DDX21Q9NR30 783 aaKnown RBP eCLIP18.21■□□□□ 0.51
COL5A1-205ENST00000464187 THSD7AQ9UPZ6 1657 aa18.21■□□□□ 0.51
COL5A1-205ENST00000464187 PDIA6Q15084 440 aa18.21■□□□□ 0.51
COL5A1-205ENST00000464187 FBXO41Q8TF61 875 aa18.21■□□□□ 0.51
COL5A1-205ENST00000464187 C5P01031 1676 aa18.2■□□□□ 0.5
COL5A1-205ENST00000464187 UBR2Q8IWV8 1755 aa18.2■□□□□ 0.5
COL5A1-205ENST00000464187 ZBTB7BO15156 539 aaPredicted RBP18.2■□□□□ 0.5
COL5A1-205ENST00000464187 SEC24BO95487 1268 aa18.2■□□□□ 0.5
COL5A1-205ENST00000464187 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
COL5A1-205ENST00000464187 HYPKQ9NX55 129 aa18.2■□□□□ 0.5
COL5A1-205ENST00000464187 DOT1LQ8TEK3 1739 aa18.2■□□□□ 0.5
COL5A1-205ENST00000464187 ITGB4P16144 1822 aa18.2■□□□□ 0.5
COL5A1-205ENST00000464187 SEPT12Q8IYM1 358 aa18.19■□□□□ 0.5
COL5A1-205ENST00000464187 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
COL5A1-205ENST00000464187 KAT6BQ8WYB5 2073 aa18.18■□□□□ 0.5
COL5A1-205ENST00000464187 MYL6BP14649 208 aa18.18■□□□□ 0.5
COL5A1-205ENST00000464187 NBR1Q14596 966 aa18.18■□□□□ 0.5
COL5A1-205ENST00000464187 VSIG10Q8N0Z9 540 aa18.18■□□□□ 0.5
COL5A1-205ENST00000464187 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
COL5A1-205ENST00000464187 CHMP4BQ9H444 224 aaKnown RBP18.18■□□□□ 0.5
COL5A1-205ENST00000464187 KCNQ2O43526 872 aa18.17■□□□□ 0.5
COL5A1-205ENST00000464187 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
COL5A1-205ENST00000464187 CCT4P50991 539 aaKnown RBP18.16■□□□□ 0.5
COL5A1-205ENST00000464187 ZNF772Q68DY9 489 aaPredicted RBP18.16■□□□□ 0.5
COL5A1-205ENST00000464187 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
COL5A1-205ENST00000464187 FAM182BQ5T319 152 aa18.16■□□□□ 0.5
COL5A1-205ENST00000464187 LRP10Q7Z4F1 713 aa18.16■□□□□ 0.5
COL5A1-205ENST00000464187 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
COL5A1-205ENST00000464187 AIMP1Q12904 312 aaKnown RBP18.15■□□□□ 0.5
COL5A1-205ENST00000464187 TEX13AQ9BXU3 409 aaPredicted RBP18.15■□□□□ 0.5
COL5A1-205ENST00000464187 C1orf115Q9H7X2 142 aa18.15■□□□□ 0.5
COL5A1-205ENST00000464187 ERBB4Q15303 1308 aa18.14■□□□□ 0.5
COL5A1-205ENST00000464187 NUCB1Q02818 461 aa18.14■□□□□ 0.5
COL5A1-205ENST00000464187 DNAJC10Q8IXB1 793 aa18.14■□□□□ 0.5
COL5A1-205ENST00000464187 SLC4A9Q96Q91 983 aa18.14■□□□□ 0.5
COL5A1-205ENST00000464187 ADCY9O60503 1353 aa18.14■□□□□ 0.49
COL5A1-205ENST00000464187 A1BGP04217 495 aa18.14■□□□□ 0.49
COL5A1-205ENST00000464187 DNAAF4Q8WXU2 420 aa18.14■□□□□ 0.49
COL5A1-205ENST00000464187 NBPF26B4DH59 902 aa18.13■□□□□ 0.49
COL5A1-205ENST00000464187 DDX58O95786 925 aaKnown RBP18.13■□□□□ 0.49
COL5A1-205ENST00000464187 SLC4A3P48751 1232 aa18.13■□□□□ 0.49
COL5A1-205ENST00000464187 NBPF14Q5TI25 921 aa18.13■□□□□ 0.49
COL5A1-205ENST00000464187 NBPF10Q6P3W6 841 aaKnown RBP18.13■□□□□ 0.49
COL5A1-205ENST00000464187 KSR2Q6VAB6 950 aa18.13■□□□□ 0.49
COL5A1-205ENST00000464187 COPS6Q7L5N1 327 aa18.13■□□□□ 0.49
COL5A1-205ENST00000464187 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
COL5A1-205ENST00000464187 XAGE3Q8WTP9 111 aa18.13■□□□□ 0.49
COL5A1-205ENST00000464187 LAMB4A4D0S4 1761 aa18.13■□□□□ 0.49
COL5A1-205ENST00000464187 PXDNLA1KZ92 1463 aa18.12■□□□□ 0.49
COL5A1-205ENST00000464187 MAP3K2Q9Y2U5 619 aa18.12■□□□□ 0.49
COL5A1-205ENST00000464187 STARD3NLO95772 234 aa18.12■□□□□ 0.49
COL5A1-205ENST00000464187 MEIS3Q99687 375 aa18.12■□□□□ 0.49
COL5A1-205ENST00000464187 RBM6P78332 1123 aaKnown RBP18.11■□□□□ 0.49
COL5A1-205ENST00000464187 SIRT2Q8IXJ6 389 aa18.11■□□□□ 0.49
COL5A1-205ENST00000464187 PALLDQ8WX93 1383 aa18.11■□□□□ 0.49
COL5A1-205ENST00000464187 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
COL5A1-205ENST00000464187 PTF1AQ7RTS3 328 aa18.1■□□□□ 0.49
COL5A1-205ENST00000464187 CHD1LQ86WJ1 897 aa18.1■□□□□ 0.49
COL5A1-205ENST00000464187 SMARCC1Q92922 1105 aaPredicted RBP18.1■□□□□ 0.49
COL5A1-205ENST00000464187 SRCIN1Q9C0H9 1055 aa18.1■□□□□ 0.49
COL5A1-205ENST00000464187 N4BP2Q86UW6 1770 aaPredicted RBP18.1■□□□□ 0.49
COL5A1-205ENST00000464187 LOC102724428A0A0B4J2F2 783 aa18.09■□□□□ 0.49
COL5A1-205ENST00000464187 SIK1P57059 783 aa18.09■□□□□ 0.49
COL5A1-205ENST00000464187 ANKRD13DQ6ZTN6 518 aa18.09■□□□□ 0.49
COL5A1-205ENST00000464187 RIC3Q7Z5B4 369 aa18.09■□□□□ 0.49
COL5A1-205ENST00000464187 GCC1Q96CN9 775 aa18.09■□□□□ 0.49
COL5A1-205ENST00000464187 LNPKQ9C0E8 428 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms