RNA–Protein interactions for RNA: ENST00000463994.4

CDKL5-203, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 2,632 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-203ENST00000463994 SHANK2Q9UPX8 1470 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 CD2BP2O95400 341 aaKnown RBP8.41□□□□□ -1.06
CDKL5-203ENST00000463994 H2AFXP16104 143 aaPredicted RBP8.41□□□□□ -1.06
CDKL5-203ENST00000463994 SLFN5Q08AF3 891 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 ELF2Q15723 593 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 FMNL3Q8IVF7 1028 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 COG6Q9Y2V7 657 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 FAM135AQ9P2D6 1515 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 ZNF518AQ6AHZ1 1483 aa8.41□□□□□ -1.06
CDKL5-203ENST00000463994 ZNF521Q96K83 1311 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 MADDQ8WXG6 1647 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 BCAR3O75815 825 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 CT47B1P0C2W7 299 aaPredicted RBP8.4□□□□□ -1.06
CDKL5-203ENST00000463994 CORO7P57737 925 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 LEKR1Q6ZMV7 388 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 MORC1Q86VD1 984 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 STAG1Q8WVM7 1258 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 EXOC4Q96A65 974 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 MIEF2Q96C03 454 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 FAXDC2Q96IV6 333 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 CARD11Q9BXL7 1154 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 ETAA1Q9NY74 926 aa8.4□□□□□ -1.06
CDKL5-203ENST00000463994 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.4□□□□□ -1.06
CDKL5-203ENST00000463994 SCP2P22307 547 aa8.4□□□□□ -1.07
CDKL5-203ENST00000463994 AP1ARQ63HQ0 302 aa8.4□□□□□ -1.07
CDKL5-203ENST00000463994 TTC19Q6DKK2 380 aaPredicted RBP8.4□□□□□ -1.07
CDKL5-203ENST00000463994 EFCAB13Q8IY85 973 aa8.4□□□□□ -1.07
CDKL5-203ENST00000463994 NSFL1CQ9UNZ2 370 aaKnown RBP8.4□□□□□ -1.07
CDKL5-203ENST00000463994 NKTRP30414 1462 aaKnown RBP8.4□□□□□ -1.07
CDKL5-203ENST00000463994 SPAG9O60271 1321 aaKnown RBP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 ZNF644Q9H582 1327 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 ATP8B1O43520 1251 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 MNAT1P51948 309 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 RBM5P52756 815 aaKnown RBP eCLIP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 CCDC27Q2M243 656 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 CEP135Q66GS9 1140 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 NAIF1Q69YI7 327 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 TRMT2AQ8IZ69 625 aaKnown RBP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 GIMAP7Q8NHV1 300 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 TEX13AQ9BXU3 409 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 ZSCAN16Q9H4T2 348 aaPredicted RBP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 IFT57Q9NWB7 429 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 ATP10AO60312 1499 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 GPATCH8Q9UKJ3 1502 aaKnown RBP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 SLU7O95391 586 aaKnown RBP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 NEFHP12036 1026 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 ADCY2Q08462 1091 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 ZC3H15Q8WU90 426 aaKnown RBP8.39□□□□□ -1.07
CDKL5-203ENST00000463994 TATDN2Q93075 761 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 PCDHB15Q9Y5E8 787 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 ANKRD50Q9ULJ7 1429 aa8.39□□□□□ -1.07
CDKL5-203ENST00000463994 MLH3Q9UHC1 1453 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 FER1L4A9Z1Z3 1794 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 SGSM2O43147 1006 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 NEBLO76041 1014 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 ARGLU1Q9NWB6 273 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-203ENST00000463994 IRAK4Q9NWZ3 460 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 RIMS1Q86UR5 1692 aaKnown RBP8.38□□□□□ -1.07
CDKL5-203ENST00000463994 LAMC1P11047 1609 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 ANKRD18BA2A2Z9 1011 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 CAND2O75155 1236 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 TPD52L1Q16890 204 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-203ENST00000463994 C1QTNF12Q5T7M4 302 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 PANK1Q8TE04 598 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 UBXN6Q9BZV1 441 aa8.38□□□□□ -1.07
CDKL5-203ENST00000463994 CFDP1Q9UEE9 299 aaPredicted RBP8.38□□□□□ -1.07
CDKL5-203ENST00000463994 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.38□□□□□ -1.07
CDKL5-203ENST00000463994 MROH2AA6NES4 1674 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 PREX1Q8TCU6 1659 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 NRDCO43847 1150 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 CCT2P78371 535 aaKnown RBP8.37□□□□□ -1.07
CDKL5-203ENST00000463994 WDR43Q15061 677 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDKL5-203ENST00000463994 TMCO3Q6UWJ1 677 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 CCDC186Q7Z3E2 898 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 KLHL23Q8NBE8 558 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 SUDS3Q9H7L9 328 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-203ENST00000463994 ABCC1P33527 1531 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 RPS6KA5O75582 802 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 PAX7P23759 505 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 LMAN1P49257 510 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 CLCN6P51797 869 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 HDAC1Q13547 482 aaPredicted RBP8.37□□□□□ -1.07
CDKL5-203ENST00000463994 SETDB1Q15047 1291 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 EFCAB2Q5VUJ9 269 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 MKRN1Q9UHC7 482 aaKnown RBP8.37□□□□□ -1.07
CDKL5-203ENST00000463994 EXOC6BQ9Y2D4 811 aa8.37□□□□□ -1.07
CDKL5-203ENST00000463994 A0A087WUV0 522 aaPredicted RBP8.36□□□□□ -1.07
CDKL5-203ENST00000463994 ZRANB2O95218 330 aaKnown RBP eCLIP8.36□□□□□ -1.07
CDKL5-203ENST00000463994 TRAF1Q13077 416 aa8.36□□□□□ -1.07
CDKL5-203ENST00000463994 IRF5Q13568 498 aa8.36□□□□□ -1.07
CDKL5-203ENST00000463994 GBP6Q6ZN66 633 aa8.36□□□□□ -1.07
CDKL5-203ENST00000463994 TSHZ1Q6ZSZ6 1077 aa8.36□□□□□ -1.07
CDKL5-203ENST00000463994 TADA2BQ86TJ2 420 aa8.36□□□□□ -1.07
CDKL5-203ENST00000463994 REXO1L1PQ8IX06 675 aa8.36□□□□□ -1.07
CDKL5-203ENST00000463994 TEX11Q8IYF3 940 aa8.36□□□□□ -1.07
CDKL5-203ENST00000463994 SH3GL3Q99963 347 aa8.36□□□□□ -1.07
CDKL5-203ENST00000463994 A1CFQ9NQ94 594 aaKnown RBP8.36□□□□□ -1.07
CDKL5-203ENST00000463994 GNL3LQ9NVN8 582 aaKnown RBP8.36□□□□□ -1.07
CDKL5-203ENST00000463994 CPSF2Q9P2I0 782 aaKnown RBP8.36□□□□□ -1.07
CDKL5-203ENST00000463994 ANAPC4Q9UJX5 808 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms