RNA–Protein interactions for RNA: ENST00000463728.1

LRP11-203, Transcript of LDL receptor related protein 11, humanhuman

TSL 2

Gene LRP11, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP11-203ENST00000463728 FAM196AQ6ZSG2 479 aa11.54□□□□□ -0.56
LRP11-203ENST00000463728 PALLDQ8WX93 1383 aa11.54□□□□□ -0.56
LRP11-203ENST00000463728 SNRPA1P09661 255 aaKnown RBP11.53□□□□□ -0.56
LRP11-203ENST00000463728 MRPL50Q8N5N7 158 aaKnown RBP11.53□□□□□ -0.56
LRP11-203ENST00000463728 FRAT1Q92837 279 aaPredicted RBP11.53□□□□□ -0.56
LRP11-203ENST00000463728 SLC4A9Q96Q91 983 aa11.53□□□□□ -0.56
LRP11-203ENST00000463728 TNNQ9UQP3 1299 aa11.53□□□□□ -0.56
LRP11-203ENST00000463728 USP16Q9Y5T5 823 aa11.53□□□□□ -0.56
LRP11-203ENST00000463728 ANXA1P04083 346 aa11.52□□□□□ -0.57
LRP11-203ENST00000463728 HOXB7P09629 217 aa11.52□□□□□ -0.57
LRP11-203ENST00000463728 PIP4K2AP48426 406 aaPredicted RBP11.52□□□□□ -0.57
LRP11-203ENST00000463728 ALDH1L2Q3SY69 923 aa11.52□□□□□ -0.57
LRP11-203ENST00000463728 CCDC30Q5VVM6 783 aa11.52□□□□□ -0.57
LRP11-203ENST00000463728 DNAJC10Q8IXB1 793 aa11.52□□□□□ -0.57
LRP11-203ENST00000463728 CHPF2Q9P2E5 772 aa11.52□□□□□ -0.57
LRP11-203ENST00000463728 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
LRP11-203ENST00000463728 KCNQ4P56696 695 aa11.51□□□□□ -0.57
LRP11-203ENST00000463728 PROSER3Q2NL68 480 aa11.51□□□□□ -0.57
LRP11-203ENST00000463728 G2E3Q7L622 706 aa11.51□□□□□ -0.57
LRP11-203ENST00000463728 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
LRP11-203ENST00000463728 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
LRP11-203ENST00000463728 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
LRP11-203ENST00000463728 SOS1Q07889 1333 aaPredicted RBP11.51□□□□□ -0.57
LRP11-203ENST00000463728 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
LRP11-203ENST00000463728 LY75O60449 1722 aa11.51□□□□□ -0.57
LRP11-203ENST00000463728 TNS1Q9HBL0 1735 aaKnown RBP11.51□□□□□ -0.57
LRP11-203ENST00000463728 LOC102724428A0A0B4J2F2 783 aa11.5□□□□□ -0.57
LRP11-203ENST00000463728 SIK1P57059 783 aa11.5□□□□□ -0.57
LRP11-203ENST00000463728 ITPK1Q13572 414 aa11.5□□□□□ -0.57
LRP11-203ENST00000463728 C20orf194Q5TEA3 1177 aa11.5□□□□□ -0.57
LRP11-203ENST00000463728 STK31Q9BXU1 1019 aa11.5□□□□□ -0.57
LRP11-203ENST00000463728 NOB1Q9ULX3 412 aaKnown RBP11.5□□□□□ -0.57
LRP11-203ENST00000463728 A1BGP04217 495 aa11.49□□□□□ -0.57
LRP11-203ENST00000463728 MYL6BP14649 208 aa11.49□□□□□ -0.57
LRP11-203ENST00000463728 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
LRP11-203ENST00000463728 CICQ96RK0 1608 aaPredicted RBP11.49□□□□□ -0.57
LRP11-203ENST00000463728 COL5A3P25940 1745 aaPredicted RBP11.49□□□□□ -0.57
LRP11-203ENST00000463728 PDIA6Q15084 440 aa11.48□□□□□ -0.57
LRP11-203ENST00000463728 VSIG10Q8N0Z9 540 aa11.48□□□□□ -0.57
LRP11-203ENST00000463728 CLUAP1Q96AJ1 413 aa11.48□□□□□ -0.57
LRP11-203ENST00000463728 PHAXQ9H814 394 aaKnown RBP11.48□□□□□ -0.57
LRP11-203ENST00000463728 KIF16BQ96L93 1317 aa11.48□□□□□ -0.57
LRP11-203ENST00000463728 ZNF831Q5JPB2 1677 aa11.47□□□□□ -0.57
LRP11-203ENST00000463728 NBPF26B4DH59 902 aa11.47□□□□□ -0.57
LRP11-203ENST00000463728 NEFLP07196 543 aa11.47□□□□□ -0.57
LRP11-203ENST00000463728 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
LRP11-203ENST00000463728 TRIM27P14373 513 aa11.47□□□□□ -0.57
LRP11-203ENST00000463728 NBPF14Q5TI25 921 aa11.47□□□□□ -0.57
LRP11-203ENST00000463728 ZKSCAN2Q63HK3 967 aa11.47□□□□□ -0.57
LRP11-203ENST00000463728 NBPF10Q6P3W6 841 aaKnown RBP11.47□□□□□ -0.57
LRP11-203ENST00000463728 NBPF15Q8N660 670 aa11.47□□□□□ -0.57
LRP11-203ENST00000463728 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.47□□□□□ -0.57
LRP11-203ENST00000463728 PANK1Q8TE04 598 aa11.47□□□□□ -0.57
LRP11-203ENST00000463728 DDX21Q9NR30 783 aaKnown RBP eCLIP11.47□□□□□ -0.57
LRP11-203ENST00000463728 DBF4Q9UBU7 674 aaPredicted RBP11.47□□□□□ -0.57
LRP11-203ENST00000463728 CACNA1FO60840 1977 aa11.47□□□□□ -0.57
LRP11-203ENST00000463728 TAF1LQ8IZX4 1826 aa11.46□□□□□ -0.57
LRP11-203ENST00000463728 STARD3NLO95772 234 aa11.46□□□□□ -0.57
LRP11-203ENST00000463728 APBA3O96018 575 aa11.46□□□□□ -0.57
LRP11-203ENST00000463728 RLBP1P12271 317 aa11.46□□□□□ -0.57
LRP11-203ENST00000463728 BRPF1P55201 1214 aaPredicted RBP11.46□□□□□ -0.57
LRP11-203ENST00000463728 AIMP1Q12904 312 aaKnown RBP11.46□□□□□ -0.57
LRP11-203ENST00000463728 FLIIQ13045 1269 aa11.46□□□□□ -0.57
LRP11-203ENST00000463728 FKBP8Q14318 412 aa11.46□□□□□ -0.57
LRP11-203ENST00000463728 LINC00116Q8NCU8 138 aa11.46□□□□□ -0.57
LRP11-203ENST00000463728 TEX13AQ9BXU3 409 aaPredicted RBP11.46□□□□□ -0.57
LRP11-203ENST00000463728 CCNL1Q9UK58 526 aaPredicted RBP11.46□□□□□ -0.57
LRP11-203ENST00000463728 ZNF330Q9Y3S2 320 aaPredicted RBP11.46□□□□□ -0.57
LRP11-203ENST00000463728 RREB1Q92766 1687 aa11.46□□□□□ -0.58
LRP11-203ENST00000463728 F6X3S4 739 aa11.45□□□□□ -0.58
LRP11-203ENST00000463728 IPO8O15397 1037 aaKnown RBP11.45□□□□□ -0.58
LRP11-203ENST00000463728 FKBP5Q13451 457 aaPredicted RBP11.45□□□□□ -0.58
LRP11-203ENST00000463728 ATF7IPQ6VMQ6 1270 aa11.45□□□□□ -0.58
LRP11-203ENST00000463728 XAGE3Q8WTP9 111 aa11.45□□□□□ -0.58
LRP11-203ENST00000463728 CRBNQ96SW2 442 aa11.45□□□□□ -0.58
LRP11-203ENST00000463728 ZBTB1Q9Y2K1 713 aa11.45□□□□□ -0.58
LRP11-203ENST00000463728 ERBB4Q15303 1308 aa11.44□□□□□ -0.58
LRP11-203ENST00000463728 CRKLP46109 303 aaKnown RBP11.44□□□□□ -0.58
LRP11-203ENST00000463728 INTS5Q6P9B9 1019 aaKnown RBP11.44□□□□□ -0.58
LRP11-203ENST00000463728 LRP10Q7Z4F1 713 aa11.44□□□□□ -0.58
LRP11-203ENST00000463728 DZIP1LQ8IYY4 767 aaKnown RBP11.44□□□□□ -0.58
LRP11-203ENST00000463728 CHMP4AQ9BY43 222 aa11.44□□□□□ -0.58
LRP11-203ENST00000463728 API5Q9BZZ5 524 aaKnown RBP11.44□□□□□ -0.58
LRP11-203ENST00000463728 LRRC4BQ9NT99 713 aa11.44□□□□□ -0.58
LRP11-203ENST00000463728 CCDC87Q9NVE4 849 aa11.44□□□□□ -0.58
LRP11-203ENST00000463728 HYPKQ9NX55 129 aa11.44□□□□□ -0.58
LRP11-203ENST00000463728 MYH14Q7Z406 1995 aaKnown RBP11.44□□□□□ -0.58
LRP11-203ENST00000463728 C4BP0C0L5 1744 aa11.43□□□□□ -0.58
LRP11-203ENST00000463728 PTPRCP08575 1304 aa11.43□□□□□ -0.58
LRP11-203ENST00000463728 SMIM5Q71RC9 77 aa11.43□□□□□ -0.58
LRP11-203ENST00000463728 COPS6Q7L5N1 327 aa11.43□□□□□ -0.58
LRP11-203ENST00000463728 FTSJ3Q8IY81 847 aaKnown RBP11.43□□□□□ -0.58
LRP11-203ENST00000463728 TMEM57Q8N5G2 664 aa11.43□□□□□ -0.58
LRP11-203ENST00000463728 EXOC6Q8TAG9 804 aa11.43□□□□□ -0.58
LRP11-203ENST00000463728 COG6Q9Y2V7 657 aa11.43□□□□□ -0.58
LRP11-203ENST00000463728 GTF3C3Q9Y5Q9 886 aa11.43□□□□□ -0.58
LRP11-203ENST00000463728 ARFGEF2Q9Y6D5 1785 aa11.43□□□□□ -0.58
LRP11-203ENST00000463728 ADCY9O60503 1353 aa11.42□□□□□ -0.58
LRP11-203ENST00000463728 ABCC4O15439 1325 aa11.42□□□□□ -0.58
LRP11-203ENST00000463728 TXNRD1Q16881 649 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms