RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 ADAMTS7Q9UKP4 1686 aa17.68■□□□□ 0.42
COMMD3-205ENST00000463688 MCM10Q7L590 875 aa17.68■□□□□ 0.42
COMMD3-205ENST00000463688 NLGN2Q8NFZ4 835 aa17.68■□□□□ 0.42
COMMD3-205ENST00000463688 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
COMMD3-205ENST00000463688 COL15A1P39059 1388 aa17.67■□□□□ 0.42
COMMD3-205ENST00000463688 CANXP27824 592 aaKnown RBP17.67■□□□□ 0.42
COMMD3-205ENST00000463688 ZNF652Q9Y2D9 606 aa17.67■□□□□ 0.42
COMMD3-205ENST00000463688 CICQ96RK0 1608 aaPredicted RBP17.67■□□□□ 0.42
COMMD3-205ENST00000463688 TUBGCP6Q96RT7 1819 aa17.67■□□□□ 0.42
COMMD3-205ENST00000463688 EIF5P55010 431 aaKnown RBP17.66■□□□□ 0.42
COMMD3-205ENST00000463688 ZBTB1Q9Y2K1 713 aa17.66■□□□□ 0.42
COMMD3-205ENST00000463688 USPL1Q5W0Q7 1092 aa17.65■□□□□ 0.42
COMMD3-205ENST00000463688 KCPQ6ZWJ8 1503 aa17.65■□□□□ 0.42
COMMD3-205ENST00000463688 CLEC4GQ6UXB4 293 aa17.64■□□□□ 0.42
COMMD3-205ENST00000463688 SMIM5Q71RC9 77 aa17.64■□□□□ 0.42
COMMD3-205ENST00000463688 PRKRIP1Q9H875 184 aaPredicted RBP17.64■□□□□ 0.42
COMMD3-205ENST00000463688 TM4SF1P30408 202 aa17.64■□□□□ 0.41
COMMD3-205ENST00000463688 RIPK4P57078 832 aa17.64■□□□□ 0.41
COMMD3-205ENST00000463688 CALD1Q05682 793 aaKnown RBP17.64■□□□□ 0.41
COMMD3-205ENST00000463688 FKBP8Q14318 412 aa17.64■□□□□ 0.41
COMMD3-205ENST00000463688 RUNDC1Q96C34 613 aa17.64■□□□□ 0.41
COMMD3-205ENST00000463688 CHMP4AQ9BY43 222 aa17.64■□□□□ 0.41
COMMD3-205ENST00000463688 COL5A3P25940 1745 aaPredicted RBP17.63■□□□□ 0.41
COMMD3-205ENST00000463688 PIM2Q9P1W9 311 aa17.63■□□□□ 0.41
COMMD3-205ENST00000463688 SRP68Q9UHB9 627 aaKnown RBP17.63■□□□□ 0.41
COMMD3-205ENST00000463688 NPHP1O15259 732 aa17.62■□□□□ 0.41
COMMD3-205ENST00000463688 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
COMMD3-205ENST00000463688 ZNF330Q9Y3S2 320 aaPredicted RBP17.62■□□□□ 0.41
COMMD3-205ENST00000463688 C10orf71Q711Q0 1435 aa17.6■□□□□ 0.41
COMMD3-205ENST00000463688 POLRMTO00411 1230 aaKnown RBP17.6■□□□□ 0.41
COMMD3-205ENST00000463688 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
COMMD3-205ENST00000463688 DCTN1Q14203 1278 aa17.6■□□□□ 0.41
COMMD3-205ENST00000463688 ERBB4Q15303 1308 aa17.6■□□□□ 0.41
COMMD3-205ENST00000463688 ZNF316A6NFI3 1004 aaPredicted RBP17.59■□□□□ 0.41
COMMD3-205ENST00000463688 SERPINB2P05120 415 aa17.59■□□□□ 0.41
COMMD3-205ENST00000463688 YBX3P16989 372 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■□□□□ 10
COMMD3-205ENST00000463688 PDE6BP35913 854 aa17.59■□□□□ 0.41
COMMD3-205ENST00000463688 NFIXQ14938 502 aa17.59■□□□□ 0.41
COMMD3-205ENST00000463688 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
COMMD3-205ENST00000463688 DZIP3Q86Y13 1208 aaKnown RBP17.59■□□□□ 0.41
COMMD3-205ENST00000463688 TSPYL4Q9UJ04 414 aa17.59■□□□□ 0.41
COMMD3-205ENST00000463688 BCS1LQ9Y276 419 aa17.58■□□□□ 0.41
COMMD3-205ENST00000463688 CARMIL3Q8ND23 1372 aa17.58■□□□□ 0.4
COMMD3-205ENST00000463688 A0A0G2JLW4 131 aa17.57■□□□□ 0.4
COMMD3-205ENST00000463688 H0YIN7 160 aa17.57■□□□□ 0.4
COMMD3-205ENST00000463688 ANP32CO43423 234 aa17.57■□□□□ 0.4
COMMD3-205ENST00000463688 A1BGP04217 495 aa17.57■□□□□ 0.4
COMMD3-205ENST00000463688 ST5P78524 1137 aa17.57■□□□□ 0.4
COMMD3-205ENST00000463688 ZNF784Q8NCA9 323 aaPredicted RBP17.57■□□□□ 0.4
COMMD3-205ENST00000463688 USP16Q9Y5T5 823 aa17.57■□□□□ 0.4
COMMD3-205ENST00000463688 TJP1Q07157 1748 aa17.56■□□□□ 0.4
COMMD3-205ENST00000463688 KCNQ3O43525 872 aa17.56■□□□□ 0.4
COMMD3-205ENST00000463688 GIGYF1O75420 1035 aaPredicted RBP17.56■□□□□ 0.4
COMMD3-205ENST00000463688 DDR1Q08345 913 aa17.56■□□□□ 0.4
COMMD3-205ENST00000463688 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
COMMD3-205ENST00000463688 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
COMMD3-205ENST00000463688 MYH14Q7Z406 1995 aaKnown RBP17.56■□□□□ 0.4
COMMD3-205ENST00000463688 DPEP1P16444 411 aa17.55■□□□□ 0.4
COMMD3-205ENST00000463688 EIF4A1P60842 406 aaKnown RBP17.55■□□□□ 0.4
COMMD3-205ENST00000463688 KIF6Q6ZMV9 814 aa17.55■□□□□ 0.4
COMMD3-205ENST00000463688 UBR2Q8IWV8 1755 aa17.55■□□□□ 0.4
COMMD3-205ENST00000463688 ERVV-1B6SEH8 477 aa17.55■□□□□ 0.4
COMMD3-205ENST00000463688 TPTE2Q6XPS3 522 aa17.55■□□□□ 0.4
COMMD3-205ENST00000463688 C4AP0C0L4 1744 aa17.55■□□□□ 0.4
COMMD3-205ENST00000463688 PXDNLA1KZ92 1463 aa17.54■□□□□ 0.4
COMMD3-205ENST00000463688 CAMTA2O94983 1202 aa17.54■□□□□ 0.4
COMMD3-205ENST00000463688 CNBD1Q8NA66 436 aa17.54■□□□□ 0.4
COMMD3-205ENST00000463688 ADAMTS8Q9UP79 889 aa17.54■□□□□ 0.4
COMMD3-205ENST00000463688 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
COMMD3-205ENST00000463688 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
COMMD3-205ENST00000463688 NYXQ9GZU5 481 aa17.53■□□□□ 0.4
COMMD3-205ENST00000463688 UTRNP46939 3433 aa17.52■□□□□ 0.4
COMMD3-205ENST00000463688 HOXB7P09629 217 aa17.52■□□□□ 0.4
COMMD3-205ENST00000463688 SOGA3Q5TF21 947 aa17.52■□□□□ 0.4
COMMD3-205ENST00000463688 TTLL6Q8N841 843 aa17.52■□□□□ 0.4
COMMD3-205ENST00000463688 BCL2L12Q9HB09 334 aa17.52■□□□□ 0.4
COMMD3-205ENST00000463688 MIS18AQ9NYP9 233 aa17.52■□□□□ 0.4
COMMD3-205ENST00000463688 GTF2E1P29083 439 aaPredicted RBP17.51■□□□□ 0.39
COMMD3-205ENST00000463688 TBC1D9BQ66K14 1250 aa17.51■□□□□ 0.39
COMMD3-205ENST00000463688 PPP4R3CPQ6ZMV5 832 aa17.51■□□□□ 0.39
COMMD3-205ENST00000463688 NBPF5PQ86XG9 351 aaPredicted RBP17.51■□□□□ 0.39
COMMD3-205ENST00000463688 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
COMMD3-205ENST00000463688 CHD4Q14839 1912 aa17.51■□□□□ 0.39
COMMD3-205ENST00000463688 NEUROD2Q15784 382 aa17.5■□□□□ 0.39
COMMD3-205ENST00000463688 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
COMMD3-205ENST00000463688 C2CD5Q86YS7 1000 aa17.5■□□□□ 0.39
COMMD3-205ENST00000463688 CNKSR1Q969H4 720 aa17.5■□□□□ 0.39
COMMD3-205ENST00000463688 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
COMMD3-205ENST00000463688 CFAP44Q96MT7 982 aa17.49■□□□□ 0.39
COMMD3-205ENST00000463688 GPBP1L1Q9HC44 474 aaPredicted RBP17.49■□□□□ 0.39
COMMD3-205ENST00000463688 NIP7Q9Y221 180 aaKnown RBP eCLIP17.49■□□□□ 0.39
COMMD3-205ENST00000463688 CHL1O00533 1208 aa17.48■□□□□ 0.39
COMMD3-205ENST00000463688 KCNA3P22001 575 aa17.48■□□□□ 0.39
COMMD3-205ENST00000463688 HSP90AB3PQ58FF7 597 aa17.48■□□□□ 0.39
COMMD3-205ENST00000463688 THUMPD2Q9BTF0 503 aaKnown RBP17.48■□□□□ 0.39
COMMD3-205ENST00000463688 RRP7AQ9Y3A4 280 aaKnown RBP17.48■□□□□ 0.39
COMMD3-205ENST00000463688 ZC3H4Q9UPT8 1303 aaKnown RBP17.48■□□□□ 0.39
COMMD3-205ENST00000463688 GNAI1P63096 354 aa17.47■□□□□ 0.39
COMMD3-205ENST00000463688 VIRMAQ69YN4 1812 aaKnown RBP17.47■□□□□ 0.39
COMMD3-205ENST00000463688 MAP3K15Q6ZN16 1313 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms