RNA–Protein interactions for RNA: ENST00000463275.1

HCG9-202, Transcript of HLA complex group 9, humanhuman

TSL 5

Gene HCG9, Length 101 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG9-202ENST00000463275 CTU1Q7Z7A3 348 aaKnown RBP4.34□□□□□ -1.71
HCG9-202ENST00000463275 TTLL6Q8N841 843 aa4.34□□□□□ -1.71
HCG9-202ENST00000463275 SRP68Q9UHB9 627 aaKnown RBP4.34□□□□□ -1.71
HCG9-202ENST00000463275 RTCBQ9Y3I0 505 aaKnown RBP4.34□□□□□ -1.71
HCG9-202ENST00000463275 FAM208AQ9UK61 1670 aaKnown RBP4.33□□□□□ -1.72
HCG9-202ENST00000463275 INSRP06213 1382 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 USP31Q70CQ4 1352 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 ZNF541Q9H0D2 1346 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 LTBP3Q9NS15 1303 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 C21orf2O43822 256 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 RPS6KA4O75676 772 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 ADRA2BP18089 450 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 ATP6V1AP38606 617 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 SRPK2P78362 688 aaKnown RBP4.33□□□□□ -1.72
HCG9-202ENST00000463275 APLP2Q06481 763 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 RC3H1Q5TC82 1133 aaKnown RBP4.33□□□□□ -1.72
HCG9-202ENST00000463275 IP6K1Q92551 441 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 LTV1Q96GA3 475 aaPredicted RBP4.33□□□□□ -1.72
HCG9-202ENST00000463275 HHIPL1Q96JK4 782 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 PRDM6Q9NQX0 595 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 HACL1Q9UJ83 578 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 ASAP1Q9ULH1 1129 aa4.33□□□□□ -1.72
HCG9-202ENST00000463275 TTC21AQ8NDW8 1320 aa4.32□□□□□ -1.72
HCG9-202ENST00000463275 POTEFA5A3E0 1075 aa4.32□□□□□ -1.72
HCG9-202ENST00000463275 RFC4P35249 363 aa4.32□□□□□ -1.72
HCG9-202ENST00000463275 NBPF6Q5VWK0 638 aa4.32□□□□□ -1.72
HCG9-202ENST00000463275 PNMA8AQ86V59 439 aaPredicted RBP4.32□□□□□ -1.72
HCG9-202ENST00000463275 NBPF4Q96M43 638 aa4.32□□□□□ -1.72
HCG9-202ENST00000463275 ATG3Q9NT62 314 aa4.32□□□□□ -1.72
HCG9-202ENST00000463275 RNF186Q9NXI6 227 aa4.32□□□□□ -1.72
HCG9-202ENST00000463275 RAPGEFL1Q9UHV5 662 aa4.32□□□□□ -1.72
HCG9-202ENST00000463275 FER1L6Q2WGJ9 1857 aa4.32□□□□□ -1.72
HCG9-202ENST00000463275 MYH14Q7Z406 1995 aaKnown RBP4.31□□□□□ -1.72
HCG9-202ENST00000463275 KDRP35968 1356 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 RNF123Q5XPI4 1314 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 USP42Q9H9J4 1324 aaKnown RBP4.31□□□□□ -1.72
HCG9-202ENST00000463275 ITGB4P16144 1822 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 LOC105371045A0A1W2PR82 267 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 FAM155AB1AL88 458 aaPredicted RBP4.31□□□□□ -1.72
HCG9-202ENST00000463275 H0YGN5 161 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 TRPA1O75762 1119 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 COL9A1P20849 921 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 NKX1-1Q15270 411 aaPredicted RBP4.31□□□□□ -1.72
HCG9-202ENST00000463275 NME9Q86XW9 330 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 C2CD5Q86YS7 1000 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 ZNF692Q9BU19 519 aaPredicted RBP4.31□□□□□ -1.72
HCG9-202ENST00000463275 TAOK3Q9H2K8 898 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 PRO3102Q9H379 93 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 SAGE1Q9NXZ1 904 aa4.31□□□□□ -1.72
HCG9-202ENST00000463275 RBM27Q9P2N5 1060 aaKnown RBP4.31□□□□□ -1.72
HCG9-202ENST00000463275 CD163L1Q9NR16 1453 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 DLEC1Q9Y238 1755 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 CARMIL3Q8ND23 1372 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 MAP3K19Q56UN5 1328 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 CNTNAP4Q9C0A0 1308 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 SOX1O00570 391 aaPredicted RBP4.3□□□□□ -1.72
HCG9-202ENST00000463275 HOXD11P31277 338 aaPredicted RBP4.3□□□□□ -1.72
HCG9-202ENST00000463275 KIF23Q02241 960 aaPredicted RBP4.3□□□□□ -1.72
HCG9-202ENST00000463275 NOGQ13253 232 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 PKN2Q16513 984 aaKnown RBP4.3□□□□□ -1.72
HCG9-202ENST00000463275 CHRDL2Q6WN34 429 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 SYNE4Q8N205 404 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 USHBP1Q8N6Y0 703 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 MPHOSPH9Q99550 1183 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 KDM2AQ9Y2K7 1162 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 TRPM7Q96QT4 1865 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 LTN1O94822 1766 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 RGPD2P0DJD1 1756 aa4.3□□□□□ -1.72
HCG9-202ENST00000463275 BDP1A6H8Y1 2624 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 CGNL1Q0VF96 1302 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 ERBB4Q15303 1308 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 H0YIN7 160 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 FZD9O00144 591 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 CELF2O95319 508 aaKnown RBP4.29□□□□□ -1.72
HCG9-202ENST00000463275 EN2P19622 333 aaPredicted RBP4.29□□□□□ -1.72
HCG9-202ENST00000463275 FBLN1P23142 703 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 EPS15P42566 896 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 NFIXQ14938 502 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 AKAP4Q5JQC9 854 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 C7orf43Q8WVR3 580 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 CSRNP1Q96S65 589 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 NCOR1O75376 2440 aa4.29□□□□□ -1.72
HCG9-202ENST00000463275 AFDNP55196 1824 aaKnown RBP4.28□□□□□ -1.72
HCG9-202ENST00000463275 PCDH11XQ9BZA7 1347 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 PCDH11YQ9BZA8 1340 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 SCN11AQ9UI33 1791 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 SERPINB2P05120 415 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 HOXC9P31274 260 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 PLA2G5P39877 138 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 SCNN1DP51172 638 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 USPL1Q5W0Q7 1092 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 FBXO46Q6PJ61 603 aaPredicted RBP4.28□□□□□ -1.72
HCG9-202ENST00000463275 DLK2Q6UY11 383 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.28□□□□□ -1.72
HCG9-202ENST00000463275 DCAF11Q8TEB1 546 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 ZNF296Q8WUU4 475 aaPredicted RBP4.28□□□□□ -1.72
HCG9-202ENST00000463275 LRCH3Q96II8 777 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 GLIS2Q9BZE0 524 aaPredicted RBP4.28□□□□□ -1.72
HCG9-202ENST00000463275 BCL2L12Q9HB09 334 aa4.28□□□□□ -1.72
HCG9-202ENST00000463275 NRXN2Q9P2S2 1712 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms