RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 H3BM21 787 aa7.46□□□□□ -1.22
VRK2-208ENST00000463222 PPP1R12BO60237 982 aaPredicted RBP7.46□□□□□ -1.22
VRK2-208ENST00000463222 EPHA4P54764 986 aa7.46□□□□□ -1.22
VRK2-208ENST00000463222 PPP1R26Q5T8A7 1209 aaPredicted RBP7.46□□□□□ -1.22
VRK2-208ENST00000463222 HELQQ8TDG4 1101 aa7.46□□□□□ -1.22
VRK2-208ENST00000463222 IRF7Q92985 503 aa7.46□□□□□ -1.22
VRK2-208ENST00000463222 COL26A1Q96A83 441 aa7.46□□□□□ -1.22
VRK2-208ENST00000463222 ASB16Q96NS5 453 aa7.46□□□□□ -1.22
VRK2-208ENST00000463222 RAB6BQ9NRW1 208 aa7.46□□□□□ -1.22
VRK2-208ENST00000463222 ZNF326Q5BKZ1 582 aaKnown RBP7.45□□□□□ -1.22
VRK2-208ENST00000463222 CCDC116Q8IYX3 515 aa7.45□□□□□ -1.22
VRK2-208ENST00000463222 WASLO00401 505 aaPredicted RBP7.44□□□□□ -1.22
VRK2-208ENST00000463222 NR3C2P08235 984 aa7.44□□□□□ -1.22
VRK2-208ENST00000463222 MPSTP25325 297 aa7.44□□□□□ -1.22
VRK2-208ENST00000463222 GMPRP36959 345 aa7.44□□□□□ -1.22
VRK2-208ENST00000463222 CYP2U1Q7Z449 544 aa7.44□□□□□ -1.22
VRK2-208ENST00000463222 ZSCAN29Q8IWY8 852 aaPredicted RBP7.44□□□□□ -1.22
VRK2-208ENST00000463222 SLC4A9Q96Q91 983 aa7.44□□□□□ -1.22
VRK2-208ENST00000463222 IGSF5Q9NSI5 407 aa7.44□□□□□ -1.22
VRK2-208ENST00000463222 A6NJY4 79 aa7.43□□□□□ -1.22
VRK2-208ENST00000463222 FAM13AO94988 1023 aa7.43□□□□□ -1.22
VRK2-208ENST00000463222 ADH1CP00326 375 aa7.43□□□□□ -1.22
VRK2-208ENST00000463222 GNRH1P01148 92 aa7.43□□□□□ -1.22
VRK2-208ENST00000463222 LORP23490 312 aaPredicted RBP7.43□□□□□ -1.22
VRK2-208ENST00000463222 FBXO33Q7Z6M2 555 aa7.43□□□□□ -1.22
VRK2-208ENST00000463222 SLC9A9Q8IVB4 645 aa7.43□□□□□ -1.22
VRK2-208ENST00000463222 ARHGEF10LQ9HCE6 1279 aa7.43□□□□□ -1.22
VRK2-208ENST00000463222 SCHIP1Q9P0W5 487 aaPredicted RBP7.43□□□□□ -1.22
VRK2-208ENST00000463222 LOC105371045A0A1W2PR82 267 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 NPR3P17342 541 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 SMTNP53814 917 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 FOXK2Q01167 660 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 NR5A1Q13285 461 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 AAMPQ13685 434 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 ESCO1Q5FWF5 840 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 C16orf46Q6P387 395 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 ZSCAN1Q8NBB4 408 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 USP3Q9Y6I4 520 aa7.42□□□□□ -1.22
VRK2-208ENST00000463222 IL2RAP01589 272 aa7.41□□□□□ -1.22
VRK2-208ENST00000463222 COX20Q5RI15 118 aa7.41□□□□□ -1.22
VRK2-208ENST00000463222 TRIM52Q96A61 297 aa7.41□□□□□ -1.22
VRK2-208ENST00000463222 XAGE2Q96GT9 111 aa7.41□□□□□ -1.22
VRK2-208ENST00000463222 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
VRK2-208ENST00000463222 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.41□□□□□ -1.22
VRK2-208ENST00000463222 NNTQ13423 1086 aa7.4□□□□□ -1.22
VRK2-208ENST00000463222 EAPPQ56P03 285 aaPredicted RBP7.4□□□□□ -1.22
VRK2-208ENST00000463222 TMC7Q7Z402 723 aa7.4□□□□□ -1.22
VRK2-208ENST00000463222 RGL4Q8IZJ4 473 aa7.4□□□□□ -1.22
VRK2-208ENST00000463222 TMC1Q8TDI8 760 aa7.4□□□□□ -1.22
VRK2-208ENST00000463222 NGLY1Q96IV0 654 aa7.4□□□□□ -1.22
VRK2-208ENST00000463222 ZFP42Q96MM3 310 aa7.4□□□□□ -1.22
VRK2-208ENST00000463222 CCDC87Q9NVE4 849 aa7.4□□□□□ -1.22
VRK2-208ENST00000463222 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.22
VRK2-208ENST00000463222 ERBB4Q15303 1308 aa7.39□□□□□ -1.23
VRK2-208ENST00000463222 TNFRSF10BO14763 440 aa7.39□□□□□ -1.23
VRK2-208ENST00000463222 VSIG8P0DPA2 414 aa7.39□□□□□ -1.23
VRK2-208ENST00000463222 EIF1AXP47813 144 aaKnown RBP7.39□□□□□ -1.23
VRK2-208ENST00000463222 CBLBQ13191 982 aa7.39□□□□□ -1.23
VRK2-208ENST00000463222 MTFR1Q15390 333 aa7.39□□□□□ -1.23
VRK2-208ENST00000463222 CNKSR1Q969H4 720 aa7.39□□□□□ -1.23
VRK2-208ENST00000463222 STIM2Q9P246 746 aa7.39□□□□□ -1.23
VRK2-208ENST00000463222 BRPF3Q9ULD4 1205 aa7.39□□□□□ -1.23
VRK2-208ENST00000463222 EMILIN1Q9Y6C2 1016 aa7.39□□□□□ -1.23
VRK2-208ENST00000463222 CDK2AP1O14519 115 aa7.38□□□□□ -1.23
VRK2-208ENST00000463222 NDUFB5O43674 189 aa7.38□□□□□ -1.23
VRK2-208ENST00000463222 P4HBP07237 508 aaKnown RBP7.38□□□□□ -1.23
VRK2-208ENST00000463222 TLR1Q15399 786 aa7.38□□□□□ -1.23
VRK2-208ENST00000463222 SH3PXD2AQ5TCZ1 1133 aa7.38□□□□□ -1.23
VRK2-208ENST00000463222 MRPL14Q6P1L8 145 aaKnown RBP7.38□□□□□ -1.23
VRK2-208ENST00000463222 RBCK1Q9BYM8 510 aa7.38□□□□□ -1.23
VRK2-208ENST00000463222 QTRT2Q9H974 415 aaKnown RBP7.38□□□□□ -1.23
VRK2-208ENST00000463222 USP35Q9P2H5 1018 aa7.38□□□□□ -1.23
VRK2-208ENST00000463222 LRFN2Q9ULH4 789 aa7.38□□□□□ -1.23
VRK2-208ENST00000463222 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
VRK2-208ENST00000463222 ZBTB39O15060 712 aa7.37□□□□□ -1.23
VRK2-208ENST00000463222 FZD6O60353 706 aa7.37□□□□□ -1.23
VRK2-208ENST00000463222 TIMP2P16035 220 aa7.37□□□□□ -1.23
VRK2-208ENST00000463222 PSMA6P60900 246 aaKnown RBP7.37□□□□□ -1.23
VRK2-208ENST00000463222 FAM26DQ5JW98 314 aa7.37□□□□□ -1.23
VRK2-208ENST00000463222 STAG2Q8N3U4 1231 aa7.37□□□□□ -1.23
VRK2-208ENST00000463222 KDF1Q8NAX2 398 aaPredicted RBP7.37□□□□□ -1.23
VRK2-208ENST00000463222 ESYT1Q9BSJ8 1104 aa7.37□□□□□ -1.23
VRK2-208ENST00000463222 KLF16Q9BXK1 252 aaPredicted RBP7.37□□□□□ -1.23
VRK2-208ENST00000463222 IQSEC3Q9UPP2 1182 aaPredicted RBP7.37□□□□□ -1.23
VRK2-208ENST00000463222 PARP3Q9Y6F1 533 aa7.37□□□□□ -1.23
VRK2-208ENST00000463222 TCF3P15923 654 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 VEGFBP49765 207 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 CENPCQ03188 943 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 SCARF1Q14162 830 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 ATCAYQ86WG3 371 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 AGBL1Q96MI9 1066 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 CABP1Q9NZU7 370 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 ZNF232Q9UNY5 417 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 CHMP3Q9Y3E7 222 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 HRH3Q9Y5N1 445 aa7.36□□□□□ -1.23
VRK2-208ENST00000463222 SERTM1A2A2V5 107 aa7.35□□□□□ -1.23
VRK2-208ENST00000463222 MEN1O00255 615 aa7.35□□□□□ -1.23
VRK2-208ENST00000463222 ADH1AP07327 375 aa7.35□□□□□ -1.23
VRK2-208ENST00000463222 PLCB3Q01970 1234 aa7.35□□□□□ -1.23
VRK2-208ENST00000463222 COL19A1Q14993 1142 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms