RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 TMEM87AQ8NBN3 555 aa9.62□□□□□ -0.87
ERCC8-204ENST00000462279 IL1RAPL2Q9NP60 686 aa9.62□□□□□ -0.87
ERCC8-204ENST00000462279 CABP1Q9NZU7 370 aa9.62□□□□□ -0.87
ERCC8-204ENST00000462279 MORC2Q9Y6X9 1032 aaPredicted RBP9.62□□□□□ -0.87
ERCC8-204ENST00000462279 RGS12O14924 1447 aa9.61□□□□□ -0.87
ERCC8-204ENST00000462279 TYRO3Q06418 890 aa9.61□□□□□ -0.87
ERCC8-204ENST00000462279 ELF2Q15723 593 aa9.61□□□□□ -0.87
ERCC8-204ENST00000462279 LRRCC1Q9C099 1032 aa9.61□□□□□ -0.87
ERCC8-204ENST00000462279 NUP62CLQ9H1M0 184 aa9.61□□□□□ -0.87
ERCC8-204ENST00000462279 COL3A1P02461 1466 aaPredicted RBP9.61□□□□□ -0.87
ERCC8-204ENST00000462279 LRRC7Q96NW7 1537 aa9.61□□□□□ -0.87
ERCC8-204ENST00000462279 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.61□□□□□ -0.87
ERCC8-204ENST00000462279 PAXBP1Q9Y5B6 917 aa9.61□□□□□ -0.87
ERCC8-204ENST00000462279 ZNF853P0CG23 659 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 GJB2P29033 226 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 CERS3Q8IU89 383 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 CACTINQ8WUQ7 758 aaKnown RBP9.6□□□□□ -0.87
ERCC8-204ENST00000462279 TRIM34Q9BYJ4 488 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 MIS18AQ9NYP9 233 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 CLIP2Q9UDT6 1046 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 PLCH2O75038 1416 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 LIG1P18858 919 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 GTF3C6Q969F1 213 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 TNMDQ9H2S6 317 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 CBX8Q9HC52 389 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 ARID5BQ14865 1188 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 FBXO38Q6PIJ6 1188 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 MCM10Q7L590 875 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 ZNF397Q8NF99 534 aaPredicted RBP9.6□□□□□ -0.87
ERCC8-204ENST00000462279 MRVI1Q9Y6F6 885 aa9.6□□□□□ -0.87
ERCC8-204ENST00000462279 USP27XA6NNY8 438 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 LARGE1O95461 756 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 FILIP1Q7Z7B0 1213 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 NUTM1Q86Y26 1132 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 AEBP1Q8IUX7 1158 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 DACT1Q9NYF0 836 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 CALCOCO1Q9P1Z2 691 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 TFIP11Q9UBB9 837 aaKnown RBP9.59□□□□□ -0.87
ERCC8-204ENST00000462279 LIMCH1Q9UPQ0 1083 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 SPG7Q9UQ90 795 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 CASTP20810 708 aaKnown RBP9.59□□□□□ -0.87
ERCC8-204ENST00000462279 LMOD3Q0VAK6 560 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 PTPN14Q15678 1187 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 RUFY3Q7L099 469 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 SYTL4Q96C24 671 aaPredicted RBP9.59□□□□□ -0.87
ERCC8-204ENST00000462279 PRAM1Q96QH2 718 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 OSBPL3Q9H4L5 887 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 ARHGEF40Q8TER5 1519 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 CDC42BPGQ6DT37 1551 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 TULP4Q9NRJ4 1543 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 FAM135BQ49AJ0 1406 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 RASEFQ8IZ41 740 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 NECAB1Q8N987 351 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 NECTIN2Q92692 538 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 DNAJC2Q99543 621 aaKnown RBP9.59□□□□□ -0.87
ERCC8-204ENST00000462279 DNAJC25Q9H1X3 360 aa9.59□□□□□ -0.87
ERCC8-204ENST00000462279 ZNF75DP51815 510 aa9.58□□□□□ -0.88
ERCC8-204ENST00000462279 RRS1Q15050 365 aaKnown RBP9.58□□□□□ -0.88
ERCC8-204ENST00000462279 CCDC144BQ3MJ40 725 aa9.58□□□□□ -0.88
ERCC8-204ENST00000462279 G2E3Q7L622 706 aa9.58□□□□□ -0.88
ERCC8-204ENST00000462279 CCDC144CPQ8IYA2 1237 aa9.58□□□□□ -0.88
ERCC8-204ENST00000462279 PNMA6EA0A0J9YXQ4 647 aa9.58□□□□□ -0.88
ERCC8-204ENST00000462279 ZNF165P49910 485 aa9.58□□□□□ -0.88
ERCC8-204ENST00000462279 SYCP1Q15431 976 aa9.58□□□□□ -0.88
ERCC8-204ENST00000462279 CWC27Q6UX04 472 aaKnown RBP9.58□□□□□ -0.88
ERCC8-204ENST00000462279 TTC6Q86TZ1 520 aa9.58□□□□□ -0.88
ERCC8-204ENST00000462279 NOL10Q9BSC4 688 aaKnown RBP9.58□□□□□ -0.88
ERCC8-204ENST00000462279 SNX14Q9Y5W7 946 aa9.58□□□□□ -0.88
ERCC8-204ENST00000462279 SETD1AO15047 1707 aaKnown RBP9.58□□□□□ -0.88
ERCC8-204ENST00000462279 GNAI2P04899 355 aa9.57□□□□□ -0.88
ERCC8-204ENST00000462279 CAPN2P17655 700 aa9.57□□□□□ -0.88
ERCC8-204ENST00000462279 HSPA4P34932 840 aa9.57□□□□□ -0.88
ERCC8-204ENST00000462279 RBM6P78332 1123 aaKnown RBP9.57□□□□□ -0.88
ERCC8-204ENST00000462279 FBXW7Q969H0 707 aa9.57□□□□□ -0.88
ERCC8-204ENST00000462279 MTMR6Q9Y217 621 aa9.57□□□□□ -0.88
ERCC8-204ENST00000462279 FRMPD1Q5SYB0 1578 aa9.57□□□□□ -0.88
ERCC8-204ENST00000462279 TNNT3P45378 269 aaPredicted RBP9.57□□□□□ -0.88
ERCC8-204ENST00000462279 ZRANB1Q9UGI0 708 aa9.57□□□□□ -0.88
ERCC8-204ENST00000462279 VGFO15240 615 aaPredicted RBP9.57□□□□□ -0.88
ERCC8-204ENST00000462279 POLR3GO15318 223 aaPredicted RBP9.57□□□□□ -0.88
ERCC8-204ENST00000462279 KRT85P78386 507 aa9.57□□□□□ -0.88
ERCC8-204ENST00000462279 LARP1BQ659C4 914 aaKnown RBP9.57□□□□□ -0.88
ERCC8-204ENST00000462279 RIMS2Q9UQ26 1411 aa9.57□□□□□ -0.88
ERCC8-204ENST00000462279 SKILP12757 684 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 HNRNPH2P55795 449 aaKnown RBP9.56□□□□□ -0.88
ERCC8-204ENST00000462279 BICD2Q8TD16 824 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 ZBTB9Q96C00 473 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 PNPLA6Q8IY17 1366 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 GOLGA6L19H0YKK7 550 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 ZFP91Q96JP5 570 aaPredicted RBP9.56□□□□□ -0.88
ERCC8-204ENST00000462279 JAKMIP1Q96N16 626 aaKnown RBP9.56□□□□□ -0.88
ERCC8-204ENST00000462279 CDK19Q9BWU1 502 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 HECW2Q9P2P5 1572 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 KIF24Q5T7B8 1368 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 RAD50Q92878 1312 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 CAMSAP1Q5T5Y3 1602 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 ERCC6LQ2NKX8 1250 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 GORABQ5T7V8 394 aa9.56□□□□□ -0.88
ERCC8-204ENST00000462279 PUS7Q96PZ0 661 aaKnown RBP9.56□□□□□ -0.88
ERCC8-204ENST00000462279 USP16Q9Y5T5 823 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms