RNA–Protein interactions for RNA: ENST00000462247.1

ERCC6-204, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 3

Gene ERCC6, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-204ENST00000462247 CHRNA5P30532 468 aa16.27■□□□□ 0.2
ERCC6-204ENST00000462247 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
ERCC6-204ENST00000462247 DPY19L2Q6NUT2 758 aa16.27■□□□□ 0.2
ERCC6-204ENST00000462247 USHBP1Q8N6Y0 703 aa16.27■□□□□ 0.2
ERCC6-204ENST00000462247 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
ERCC6-204ENST00000462247 ANP32CO43423 234 aa16.26■□□□□ 0.19
ERCC6-204ENST00000462247 IL13P35225 146 aa16.26■□□□□ 0.19
ERCC6-204ENST00000462247 ARHGEF1Q92888 912 aaKnown RBP16.26■□□□□ 0.19
ERCC6-204ENST00000462247 NCAPD2Q15021 1401 aa16.26■□□□□ 0.19
ERCC6-204ENST00000462247 RFC4P35249 363 aa16.25■□□□□ 0.19
ERCC6-204ENST00000462247 MAP2K1Q02750 393 aaPredicted RBP16.25■□□□□ 0.19
ERCC6-204ENST00000462247 TIAM2Q8IVF5 1701 aa16.25■□□□□ 0.19
ERCC6-204ENST00000462247 CYP27B1O15528 508 aa16.24■□□□□ 0.19
ERCC6-204ENST00000462247 EYA1Q99502 592 aa16.24■□□□□ 0.19
ERCC6-204ENST00000462247 CCDC88AQ3V6T2 1871 aa16.24■□□□□ 0.19
ERCC6-204ENST00000462247 TMEM88BA6NKF7 163 aa16.23■□□□□ 0.19
ERCC6-204ENST00000462247 POTEIP0CG38 1075 aa16.23■□□□□ 0.19
ERCC6-204ENST00000462247 POTEJP0CG39 1038 aa16.23■□□□□ 0.19
ERCC6-204ENST00000462247 ADRA2BP18089 450 aa16.23■□□□□ 0.19
ERCC6-204ENST00000462247 AEBP1Q8IUX7 1158 aa16.23■□□□□ 0.19
ERCC6-204ENST00000462247 MIER1Q8N108 512 aa16.23■□□□□ 0.19
ERCC6-204ENST00000462247 PASKQ96RG2 1323 aa16.22■□□□□ 0.19
ERCC6-204ENST00000462247 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
ERCC6-204ENST00000462247 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
ERCC6-204ENST00000462247 TMOD3Q9NYL9 352 aa16.2■□□□□ 0.18
ERCC6-204ENST00000462247 DEFB115Q30KQ5 88 aa16.19■□□□□ 0.18
ERCC6-204ENST00000462247 WDR33Q9C0J8 1336 aaKnown RBP16.18■□□□□ 0.18
ERCC6-204ENST00000462247 RPS6KA4O75676 772 aa16.17■□□□□ 0.18
ERCC6-204ENST00000462247 HMOX1P09601 288 aa16.17■□□□□ 0.18
ERCC6-204ENST00000462247 DDR1Q08345 913 aa16.17■□□□□ 0.18
ERCC6-204ENST00000462247 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
ERCC6-204ENST00000462247 RC3H1Q5TC82 1133 aaKnown RBP16.17■□□□□ 0.18
ERCC6-204ENST00000462247 BEGAINQ9BUH8 593 aa16.17■□□□□ 0.18
ERCC6-204ENST00000462247 KDRP35968 1356 aa16.16■□□□□ 0.18
ERCC6-204ENST00000462247 RASSF10A6NK89 507 aa16.16■□□□□ 0.18
ERCC6-204ENST00000462247 U2SURPO15042 1029 aaKnown RBP16.16■□□□□ 0.18
ERCC6-204ENST00000462247 LDHDQ86WU2 507 aa16.16■□□□□ 0.18
ERCC6-204ENST00000462247 CFAP53Q96M91 514 aa16.16■□□□□ 0.18
ERCC6-204ENST00000462247 ATG3Q9NT62 314 aa16.16■□□□□ 0.18
ERCC6-204ENST00000462247 NFKBIEO00221 500 aa16.15■□□□□ 0.18
ERCC6-204ENST00000462247 FKBP8Q14318 412 aa16.15■□□□□ 0.18
ERCC6-204ENST00000462247 ERFEQ4G0M1 354 aa16.15■□□□□ 0.18
ERCC6-204ENST00000462247 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
ERCC6-204ENST00000462247 MCOLN1Q9GZU1 580 aa16.15■□□□□ 0.18
ERCC6-204ENST00000462247 ITGBL1O95965 494 aaPredicted RBP16.14■□□□□ 0.17
ERCC6-204ENST00000462247 TTLL6Q8N841 843 aa16.14■□□□□ 0.17
ERCC6-204ENST00000462247 MRS2Q9HD23 443 aa16.14■□□□□ 0.17
ERCC6-204ENST00000462247 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
ERCC6-204ENST00000462247 DDNO94850 711 aaPredicted RBP16.13■□□□□ 0.17
ERCC6-204ENST00000462247 PRPF38BQ5VTL8 546 aaKnown RBP16.13■□□□□ 0.17
ERCC6-204ENST00000462247 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
ERCC6-204ENST00000462247 RSPH6AQ9H0K4 717 aa16.13■□□□□ 0.17
ERCC6-204ENST00000462247 SRP68Q9UHB9 627 aaKnown RBP16.13■□□□□ 0.17
ERCC6-204ENST00000462247 IQCA1LA6NCM1 817 aa16.12■□□□□ 0.17
ERCC6-204ENST00000462247 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
ERCC6-204ENST00000462247 U2AF1L5P0DN76 240 aaPredicted RBP16.12■□□□□ 0.17
ERCC6-204ENST00000462247 U2AF1Q01081 240 aaKnown RBP eCLIP16.12■□□□□ 0.17
ERCC6-204ENST00000462247 DICER1Q9UPY3 1922 aaKnown RBP16.11■□□□□ 0.17
ERCC6-204ENST00000462247 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
ERCC6-204ENST00000462247 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
ERCC6-204ENST00000462247 ABT1Q9ULW3 272 aaKnown RBP16.11■□□□□ 0.17
ERCC6-204ENST00000462247 ADAMTS8Q9UP79 889 aa16.11■□□□□ 0.17
ERCC6-204ENST00000462247 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
ERCC6-204ENST00000462247 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
ERCC6-204ENST00000462247 PHACTR3Q96KR7 559 aa16.1■□□□□ 0.17
ERCC6-204ENST00000462247 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
ERCC6-204ENST00000462247 COL5A3P25940 1745 aaPredicted RBP16.09■□□□□ 0.17
ERCC6-204ENST00000462247 TM4SF1P30408 202 aa16.09■□□□□ 0.17
ERCC6-204ENST00000462247 PRKAR2BP31323 418 aa16.09■□□□□ 0.17
ERCC6-204ENST00000462247 PLEKHF1Q96S99 279 aa16.09■□□□□ 0.17
ERCC6-204ENST00000462247 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
ERCC6-204ENST00000462247 TSKSQ9UJT2 592 aa16.09■□□□□ 0.17
ERCC6-204ENST00000462247 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
ERCC6-204ENST00000462247 MYH14Q7Z406 1995 aaKnown RBP16.09■□□□□ 0.17
ERCC6-204ENST00000462247 EAPPQ56P03 285 aaPredicted RBP16.08■□□□□ 0.16
ERCC6-204ENST00000462247 CCDC146Q8IYE0 955 aa16.08■□□□□ 0.16
ERCC6-204ENST00000462247 NUDCQ9Y266 331 aa16.08■□□□□ 0.16
ERCC6-204ENST00000462247 ZNF831Q5JPB2 1677 aa16.08■□□□□ 0.16
ERCC6-204ENST00000462247 DLEC1Q9Y238 1755 aa16.08■□□□□ 0.16
ERCC6-204ENST00000462247 CCER2I3L3R5 266 aa16.07■□□□□ 0.16
ERCC6-204ENST00000462247 DGKZQ13574 1117 aa16.07■□□□□ 0.16
ERCC6-204ENST00000462247 PAXIP1Q6ZW49 1069 aaPredicted RBP16.07■□□□□ 0.16
ERCC6-204ENST00000462247 C2CD5Q86YS7 1000 aa16.07■□□□□ 0.16
ERCC6-204ENST00000462247 SCN4AP35499 1836 aa16.07■□□□□ 0.16
ERCC6-204ENST00000462247 CASP8AP2Q9UKL3 1982 aa16.06■□□□□ 0.16
ERCC6-204ENST00000462247 ECE1P42892 770 aa16.06■□□□□ 0.16
ERCC6-204ENST00000462247 GRM1Q13255 1194 aa16.06■□□□□ 0.16
ERCC6-204ENST00000462247 GPR101Q96P66 508 aaPredicted RBP16.06■□□□□ 0.16
ERCC6-204ENST00000462247 H0YIN7 160 aa16.05■□□□□ 0.16
ERCC6-204ENST00000462247 MTHFSDQ2M296 383 aaKnown RBP16.05■□□□□ 0.16
ERCC6-204ENST00000462247 CNTROBQ8N137 903 aa16.05■□□□□ 0.16
ERCC6-204ENST00000462247 CAPNS2Q96L46 248 aa16.05■□□□□ 0.16
ERCC6-204ENST00000462247 WDR43Q15061 677 aaKnown RBP eCLIP16.04■□□□□ 0.16
ERCC6-204ENST00000462247 IFNL2Q8IZJ0 200 aa16.04■□□□□ 0.16
ERCC6-204ENST00000462247 FAM9BQ8IZU0 186 aa16.04■□□□□ 0.16
ERCC6-204ENST00000462247 L3MBTL3Q96JM7 780 aaPredicted RBP16.04■□□□□ 0.16
ERCC6-204ENST00000462247 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
ERCC6-204ENST00000462247 THSD7BQ9C0I4 1608 aa16.04■□□□□ 0.16
ERCC6-204ENST00000462247 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
ERCC6-204ENST00000462247 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms