RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 USP17L13C9JLJ4 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L12C9JPN9 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L11C9JVI0 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L21D6R901 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L18D6R9N7 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L22D6RA61 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L17D6RBQ6 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L19D6RCP7 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L20D6RJB6 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 MEN1O00255 615 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 PIK3CDO00329 1044 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 THBS1P07996 1170 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 ERVK-9P63128 1117 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 USP17L24Q0WX57 530 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 NCOA4Q13772 614 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 SLC27A3Q5K4L6 730 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 KANK4Q5T7N3 995 aaPredicted RBP5.4□□□□□ -1.54
HDAC6-212ENST00000461608 LARP1Q6PKG0 1096 aaKnown RBP5.4□□□□□ -1.54
HDAC6-212ENST00000461608 PHTF2Q8N3S3 785 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 ESF1Q9H501 851 aaKnown RBP5.4□□□□□ -1.54
HDAC6-212ENST00000461608 DOLKQ9UPQ8 538 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 DYRK1BQ9Y463 629 aa5.4□□□□□ -1.54
HDAC6-212ENST00000461608 POU4F2Q12837 409 aa5.39□□□□□ -1.55
HDAC6-212ENST00000461608 AEBP1Q8IUX7 1158 aa5.39□□□□□ -1.55
HDAC6-212ENST00000461608 NLRP3Q96P20 1036 aa5.39□□□□□ -1.55
HDAC6-212ENST00000461608 OSBPL3Q9H4L5 887 aa5.39□□□□□ -1.55
HDAC6-212ENST00000461608 RAB6BQ9NRW1 208 aa5.39□□□□□ -1.55
HDAC6-212ENST00000461608 MKRN1Q9UHC7 482 aaKnown RBP5.39□□□□□ -1.55
HDAC6-212ENST00000461608 NOVA2Q9UNW9 492 aaKnown RBP5.39□□□□□ -1.55
HDAC6-212ENST00000461608 NOD1Q9Y239 953 aa5.39□□□□□ -1.55
HDAC6-212ENST00000461608 KRTAP9-6A0A140TA67 174 aa5.38□□□□□ -1.55
HDAC6-212ENST00000461608 TMEM88BA6NKF7 163 aa5.38□□□□□ -1.55
HDAC6-212ENST00000461608 GNB5O14775 395 aa5.38□□□□□ -1.55
HDAC6-212ENST00000461608 STAU1O95793 577 aaKnown RBP5.38□□□□□ -1.55
HDAC6-212ENST00000461608 SWI5Q1ZZU3 235 aa5.38□□□□□ -1.55
HDAC6-212ENST00000461608 CC2D2BQ6DHV5 1058 aa5.38□□□□□ -1.55
HDAC6-212ENST00000461608 GOLGA6L1Q8N7Z2 621 aa5.38□□□□□ -1.55
HDAC6-212ENST00000461608 NUCKS1Q9H1E3 243 aaKnown RBP5.38□□□□□ -1.55
HDAC6-212ENST00000461608 ARHGEF10LQ9HCE6 1279 aa5.38□□□□□ -1.55
HDAC6-212ENST00000461608 RBM19Q9Y4C8 960 aaKnown RBP5.38□□□□□ -1.55
HDAC6-212ENST00000461608 GTF2E1P29083 439 aaPredicted RBP5.37□□□□□ -1.55
HDAC6-212ENST00000461608 GPC1P35052 558 aa5.37□□□□□ -1.55
HDAC6-212ENST00000461608 SNRPNP63162 240 aaKnown RBP5.37□□□□□ -1.55
HDAC6-212ENST00000461608 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
HDAC6-212ENST00000461608 LARGE2Q8N3Y3 721 aa5.37□□□□□ -1.55
HDAC6-212ENST00000461608 EDARADDQ8WWZ3 215 aa5.37□□□□□ -1.55
HDAC6-212ENST00000461608 CCDC85AQ96PX6 553 aaPredicted RBP5.37□□□□□ -1.55
HDAC6-212ENST00000461608 CDCA7Q9BWT1 371 aaPredicted RBP5.37□□□□□ -1.55
HDAC6-212ENST00000461608 GRIP2Q9C0E4 1043 aa5.37□□□□□ -1.55
HDAC6-212ENST00000461608 PCDHB11Q9Y5F2 797 aa5.37□□□□□ -1.55
HDAC6-212ENST00000461608 C1QTNF9BB2RNN3 333 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 IL2RAP01589 272 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 RASA1P20936 1047 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 USP4Q13107 963 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 CLN3Q13286 438 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 PTK7Q13308 1070 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 TSGA10IPQ3SY00 556 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 NBPF10Q6P3W6 841 aaKnown RBP5.36□□□□□ -1.55
HDAC6-212ENST00000461608 SIX5Q8N196 739 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 NBPF15Q8N660 670 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 FAM200AQ8TCP9 573 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 CFHR5Q9BXR6 569 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 ZMIZ1Q9ULJ6 1067 aa5.36□□□□□ -1.55
HDAC6-212ENST00000461608 MYCP01106 439 aaPredicted RBP5.35□□□□□ -1.55
HDAC6-212ENST00000461608 CRTC2Q53ET0 693 aaPredicted RBP5.35□□□□□ -1.55
HDAC6-212ENST00000461608 TMEM164Q5U3C3 297 aa5.35□□□□□ -1.55
HDAC6-212ENST00000461608 ANKMY2Q8IV38 441 aa5.35□□□□□ -1.55
HDAC6-212ENST00000461608 DEPDC4Q8N2C3 294 aa5.35□□□□□ -1.55
HDAC6-212ENST00000461608 PGBD3Q8N328 593 aa5.35□□□□□ -1.55
HDAC6-212ENST00000461608 OGFOD1Q8N543 542 aa5.35□□□□□ -1.55
HDAC6-212ENST00000461608 ZFP64Q9NPA5 681 aa5.35□□□□□ -1.55
HDAC6-212ENST00000461608 DNAAF2Q9NVR5 837 aaKnown RBP5.35□□□□□ -1.55
HDAC6-212ENST00000461608 HRH3Q9Y5N1 445 aa5.35□□□□□ -1.55
HDAC6-212ENST00000461608 SPATA31C2B4DYI2 1134 aa5.34□□□□□ -1.55
HDAC6-212ENST00000461608 F11P03951 625 aa5.34□□□□□ -1.55
HDAC6-212ENST00000461608 GATA4P43694 442 aa5.34□□□□□ -1.55
HDAC6-212ENST00000461608 DOC2BQ14184 412 aa5.34□□□□□ -1.55
HDAC6-212ENST00000461608 TMCO4Q5TGY1 634 aa5.34□□□□□ -1.55
HDAC6-212ENST00000461608 CLP1Q92989 425 aaKnown RBP5.34□□□□□ -1.55
HDAC6-212ENST00000461608 TIMMDC1Q9NPL8 285 aa5.34□□□□□ -1.55
HDAC6-212ENST00000461608 MTMR7Q9Y216 660 aa5.34□□□□□ -1.55
HDAC6-212ENST00000461608 GNEQ9Y223 722 aaKnown RBP5.34□□□□□ -1.55
HDAC6-212ENST00000461608 BMP4P12644 408 aa5.33□□□□□ -1.56
HDAC6-212ENST00000461608 GTF2IP78347 998 aa5.33□□□□□ -1.56
HDAC6-212ENST00000461608 CDCA8Q53HL2 280 aa5.33□□□□□ -1.56
HDAC6-212ENST00000461608 OXLD1Q5BKU9 147 aa5.33□□□□□ -1.56
HDAC6-212ENST00000461608 CYP2U1Q7Z449 544 aa5.33□□□□□ -1.56
HDAC6-212ENST00000461608 CCER1Q8TC90 406 aaPredicted RBP5.33□□□□□ -1.56
HDAC6-212ENST00000461608 STK32AQ8WU08 396 aa5.33□□□□□ -1.56
HDAC6-212ENST00000461608 GPAMQ9HCL2 828 aa5.33□□□□□ -1.56
HDAC6-212ENST00000461608 SPDYE3A6NKU9 549 aa5.32□□□□□ -1.56
HDAC6-212ENST00000461608 M0R2N6 131 aa5.32□□□□□ -1.56
HDAC6-212ENST00000461608 WASLO00401 505 aaPredicted RBP5.32□□□□□ -1.56
HDAC6-212ENST00000461608 COL8A1P27658 744 aa5.32□□□□□ -1.56
HDAC6-212ENST00000461608 PHKA2P46019 1235 aa5.32□□□□□ -1.56
HDAC6-212ENST00000461608 SEC13P55735 322 aa5.32□□□□□ -1.56
HDAC6-212ENST00000461608 UBAP2LQ14157 1087 aaKnown RBP5.32□□□□□ -1.56
HDAC6-212ENST00000461608 CD163Q86VB7 1156 aa5.32□□□□□ -1.56
HDAC6-212ENST00000461608 C1orf216Q8TAB5 229 aa5.32□□□□□ -1.56
HDAC6-212ENST00000461608 KLRG1Q96E93 195 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms