RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 PROSER3Q2NL68 480 aa12.5□□□□□ -0.41
C9orf78-203ENST00000461539 DEFB132Q7Z7B7 95 aa12.5□□□□□ -0.41
C9orf78-203ENST00000461539 PROM2Q8N271 834 aa12.5□□□□□ -0.41
C9orf78-203ENST00000461539 FRAT1Q92837 279 aaPredicted RBP12.5□□□□□ -0.41
C9orf78-203ENST00000461539 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
C9orf78-203ENST00000461539 CCDC87Q9NVE4 849 aa12.5□□□□□ -0.41
C9orf78-203ENST00000461539 ZNF330Q9Y3S2 320 aaPredicted RBP12.5□□□□□ -0.41
C9orf78-203ENST00000461539 ERBB4Q15303 1308 aa12.5□□□□□ -0.41
C9orf78-203ENST00000461539 NHSQ6T4R5 1651 aa12.49□□□□□ -0.41
C9orf78-203ENST00000461539 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
C9orf78-203ENST00000461539 HMGB2P26583 209 aaKnown RBP12.49□□□□□ -0.41
C9orf78-203ENST00000461539 PDIA6Q15084 440 aa12.49□□□□□ -0.41
C9orf78-203ENST00000461539 EZH2Q15910 746 aaKnown RBP12.49□□□□□ -0.41
C9orf78-203ENST00000461539 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
C9orf78-203ENST00000461539 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
C9orf78-203ENST00000461539 NPM2Q86SE8 214 aaKnown RBP12.49□□□□□ -0.41
C9orf78-203ENST00000461539 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
C9orf78-203ENST00000461539 CAMKK2Q96RR4 588 aa12.49□□□□□ -0.41
C9orf78-203ENST00000461539 HYPKQ9NX55 129 aa12.49□□□□□ -0.41
C9orf78-203ENST00000461539 ZBTB1Q9Y2K1 713 aa12.49□□□□□ -0.41
C9orf78-203ENST00000461539 SUPT16HQ9Y5B9 1047 aaKnown RBP12.49□□□□□ -0.41
C9orf78-203ENST00000461539 AIMP1Q12904 312 aaKnown RBP12.48□□□□□ -0.41
C9orf78-203ENST00000461539 INTS5Q6P9B9 1019 aaKnown RBP12.48□□□□□ -0.41
C9orf78-203ENST00000461539 G2E3Q7L622 706 aa12.48□□□□□ -0.41
C9orf78-203ENST00000461539 UPF1Q92900 1129 aaKnown RBP eCLIP12.48□□□□□ -0.41
C9orf78-203ENST00000461539 AK7Q96M32 723 aa12.48□□□□□ -0.41
C9orf78-203ENST00000461539 NOB1Q9ULX3 412 aaKnown RBP12.48□□□□□ -0.41
C9orf78-203ENST00000461539 BRWD3Q6RI45 1802 aa12.48□□□□□ -0.41
C9orf78-203ENST00000461539 KIF16BQ96L93 1317 aa12.47□□□□□ -0.41
C9orf78-203ENST00000461539 CNTNAP4Q9C0A0 1308 aa12.47□□□□□ -0.41
C9orf78-203ENST00000461539 GNPATO15228 680 aa12.47□□□□□ -0.41
C9orf78-203ENST00000461539 IPO8O15397 1037 aaKnown RBP12.47□□□□□ -0.41
C9orf78-203ENST00000461539 BRPF1P55201 1214 aaPredicted RBP12.47□□□□□ -0.41
C9orf78-203ENST00000461539 FLIIQ13045 1269 aa12.47□□□□□ -0.41
C9orf78-203ENST00000461539 RC3H1Q5TC82 1133 aaKnown RBP12.47□□□□□ -0.41
C9orf78-203ENST00000461539 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.47□□□□□ -0.41
C9orf78-203ENST00000461539 ARXQ96QS3 562 aa12.47□□□□□ -0.41
C9orf78-203ENST00000461539 PHAXQ9H814 394 aaKnown RBP12.47□□□□□ -0.41
C9orf78-203ENST00000461539 PLIN1O60240 522 aa12.46□□□□□ -0.41
C9orf78-203ENST00000461539 IL6STP40189 918 aaPredicted RBP12.46□□□□□ -0.41
C9orf78-203ENST00000461539 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
C9orf78-203ENST00000461539 FKBP5Q13451 457 aaPredicted RBP12.46□□□□□ -0.41
C9orf78-203ENST00000461539 COPS6Q7L5N1 327 aa12.46□□□□□ -0.41
C9orf78-203ENST00000461539 XAGE3Q8WTP9 111 aa12.46□□□□□ -0.41
C9orf78-203ENST00000461539 KDM3BQ7LBC6 1761 aa12.46□□□□□ -0.42
C9orf78-203ENST00000461539 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
C9orf78-203ENST00000461539 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
C9orf78-203ENST00000461539 LRP10Q7Z4F1 713 aa12.45□□□□□ -0.42
C9orf78-203ENST00000461539 RTCBQ9Y3I0 505 aaKnown RBP12.45□□□□□ -0.42
C9orf78-203ENST00000461539 PAPPAQ13219 1627 aa12.44□□□□□ -0.42
C9orf78-203ENST00000461539 PTPRCP08575 1304 aa12.44□□□□□ -0.42
C9orf78-203ENST00000461539 SIPA1L3O60292 1781 aaPredicted RBP12.44□□□□□ -0.42
C9orf78-203ENST00000461539 PHF14O94880 888 aa12.44□□□□□ -0.42
C9orf78-203ENST00000461539 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
C9orf78-203ENST00000461539 EIF5P55010 431 aaKnown RBP12.44□□□□□ -0.42
C9orf78-203ENST00000461539 ATF7IPQ6VMQ6 1270 aa12.44□□□□□ -0.42
C9orf78-203ENST00000461539 TTLL7Q6ZT98 887 aa12.44□□□□□ -0.42
C9orf78-203ENST00000461539 SMIM5Q71RC9 77 aa12.44□□□□□ -0.42
C9orf78-203ENST00000461539 API5Q9BZZ5 524 aaKnown RBP12.44□□□□□ -0.42
C9orf78-203ENST00000461539 A0A087WZG4 1122 aa12.43□□□□□ -0.42
C9orf78-203ENST00000461539 ZNF827Q17R98 1081 aa12.43□□□□□ -0.42
C9orf78-203ENST00000461539 KIF6Q6ZMV9 814 aa12.43□□□□□ -0.42
C9orf78-203ENST00000461539 DZIP3Q86Y13 1208 aaKnown RBP12.43□□□□□ -0.42
C9orf78-203ENST00000461539 ARHGAP45Q92619 1136 aa12.43□□□□□ -0.42
C9orf78-203ENST00000461539 CLUAP1Q96AJ1 413 aa12.43□□□□□ -0.42
C9orf78-203ENST00000461539 STK32BQ9NY57 414 aa12.43□□□□□ -0.42
C9orf78-203ENST00000461539 TFCP2L1Q9NZI6 479 aa12.43□□□□□ -0.42
C9orf78-203ENST00000461539 TBC1D2BQ9UPU7 963 aa12.43□□□□□ -0.42
C9orf78-203ENST00000461539 PI4KAP2A4QPH2 592 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 F6X3S4 739 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 TRIM27P14373 513 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 TRAPPC3LQ5T215 181 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 ANKRD13DQ6ZTN6 518 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 RIC3Q7Z5B4 369 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 FTSJ3Q8IY81 847 aaKnown RBP12.42□□□□□ -0.42
C9orf78-203ENST00000461539 DZIP1LQ8IYY4 767 aaKnown RBP12.42□□□□□ -0.42
C9orf78-203ENST00000461539 PI4KAP1Q8N8J0 262 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 AKT1S1Q96B36 256 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 TNNQ9UQP3 1299 aa12.42□□□□□ -0.42
C9orf78-203ENST00000461539 BTAF1O14981 1849 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.41□□□□□ -0.42
C9orf78-203ENST00000461539 MS4A1P11836 297 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 SLC4A10Q6U841 1118 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 KSR2Q6VAB6 950 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 AMIGO3Q86WK7 504 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 PLBD2Q8NHP8 589 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 DNAAF4Q8WXU2 420 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 ANO8Q9HCE9 1232 aaPredicted RBP12.41□□□□□ -0.42
C9orf78-203ENST00000461539 MAP3K2Q9Y2U5 619 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 ITGB4P16144 1822 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 COL15A1P39059 1388 aa12.41□□□□□ -0.42
C9orf78-203ENST00000461539 RNF123Q5XPI4 1314 aa12.4□□□□□ -0.42
C9orf78-203ENST00000461539 MSH5O43196 834 aa12.4□□□□□ -0.42
C9orf78-203ENST00000461539 ADRA2BP18089 450 aa12.4□□□□□ -0.42
C9orf78-203ENST00000461539 SSFA2P28290 1259 aa12.4□□□□□ -0.42
C9orf78-203ENST00000461539 RFC4P35249 363 aa12.4□□□□□ -0.42
C9orf78-203ENST00000461539 SLC15A2Q16348 729 aa12.4□□□□□ -0.42
C9orf78-203ENST00000461539 PANK1Q8TE04 598 aa12.4□□□□□ -0.42
C9orf78-203ENST00000461539 ARHGEF1Q92888 912 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms