RNA–Protein interactions for RNA: ENST00000461214.1

COL5A3-202, Transcript of collagen type V alpha 3 chain, humanhuman

TSL 3

Gene COL5A3, Length 828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-202ENST00000461214 QSER1Q2KHR3 1735 aa18.74■□□□□ 0.59
COL5A3-202ENST00000461214 E9PSI1 815 aa18.73■□□□□ 0.59
COL5A3-202ENST00000461214 SYTL4Q96C24 671 aaPredicted RBP18.73■□□□□ 0.59
COL5A3-202ENST00000461214 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
COL5A3-202ENST00000461214 MYH16Q9H6N6 1097 aa18.73■□□□□ 0.59
COL5A3-202ENST00000461214 BTBD11A6QL63 1104 aa18.72■□□□□ 0.59
COL5A3-202ENST00000461214 CHL1O00533 1208 aa18.72■□□□□ 0.59
COL5A3-202ENST00000461214 PIGBQ92521 554 aa18.72■□□□□ 0.59
COL5A3-202ENST00000461214 ADCY9O60503 1353 aa18.71■□□□□ 0.59
COL5A3-202ENST00000461214 TSPYL4Q9UJ04 414 aa18.71■□□□□ 0.59
COL5A3-202ENST00000461214 FANCIQ9NVI1 1328 aa18.71■□□□□ 0.59
COL5A3-202ENST00000461214 PALLDQ8WX93 1383 aa18.7■□□□□ 0.58
COL5A3-202ENST00000461214 C4BP0C0L5 1744 aa18.7■□□□□ 0.58
COL5A3-202ENST00000461214 APLP1P51693 650 aa18.7■□□□□ 0.58
COL5A3-202ENST00000461214 ZNF790Q6PG37 636 aa18.7■□□□□ 0.58
COL5A3-202ENST00000461214 UBR3Q6ZT12 1888 aa18.7■□□□□ 0.58
COL5A3-202ENST00000461214 TTC5Q8N0Z6 440 aa18.7■□□□□ 0.58
COL5A3-202ENST00000461214 SMARCC1Q92922 1105 aaPredicted RBP18.7■□□□□ 0.58
COL5A3-202ENST00000461214 SLFN5Q08AF3 891 aa18.69■□□□□ 0.58
COL5A3-202ENST00000461214 MBIPQ9NS73 344 aa18.69■□□□□ 0.58
COL5A3-202ENST00000461214 MYH14Q7Z406 1995 aaKnown RBP18.69■□□□□ 0.58
COL5A3-202ENST00000461214 HEG1Q9ULI3 1381 aa18.68■□□□□ 0.58
COL5A3-202ENST00000461214 KIF3CO14782 793 aa18.68■□□□□ 0.58
COL5A3-202ENST00000461214 COL23A1Q86Y22 540 aaPredicted RBP18.68■□□□□ 0.58
COL5A3-202ENST00000461214 LAS1LQ9Y4W2 734 aaKnown RBP18.68■□□□□ 0.58
COL5A3-202ENST00000461214 SOS1Q07889 1333 aaPredicted RBP18.68■□□□□ 0.58
COL5A3-202ENST00000461214 N4BP2Q86UW6 1770 aaPredicted RBP18.68■□□□□ 0.58
COL5A3-202ENST00000461214 C4AP0C0L4 1744 aa18.67■□□□□ 0.58
COL5A3-202ENST00000461214 TRMT2AQ8IZ69 625 aaKnown RBP18.67■□□□□ 0.58
COL5A3-202ENST00000461214 COL13A1Q5TAT6 717 aaPredicted RBP18.66■□□□□ 0.58
COL5A3-202ENST00000461214 SPINK5Q9NQ38 1064 aaPredicted RBP18.66■□□□□ 0.58
COL5A3-202ENST00000461214 ATG3Q9NT62 314 aa18.66■□□□□ 0.58
COL5A3-202ENST00000461214 CCNL1Q9UK58 526 aaPredicted RBP18.66■□□□□ 0.58
COL5A3-202ENST00000461214 ASAP1Q9ULH1 1129 aa18.66■□□□□ 0.58
COL5A3-202ENST00000461214 TSR2Q969E8 191 aaKnown RBP18.65■□□□□ 0.58
COL5A3-202ENST00000461214 FMNL2Q96PY5 1086 aa18.65■□□□□ 0.58
COL5A3-202ENST00000461214 BCORQ6W2J9 1755 aa18.65■□□□□ 0.58
COL5A3-202ENST00000461214 HOXB7P09629 217 aa18.64■□□□□ 0.57
COL5A3-202ENST00000461214 EIF4A1P60842 406 aaKnown RBP18.64■□□□□ 0.57
COL5A3-202ENST00000461214 SLC39A6Q13433 755 aa18.64■□□□□ 0.57
COL5A3-202ENST00000461214 DUSP27Q5VZP5 1158 aa18.64■□□□□ 0.57
COL5A3-202ENST00000461214 VSIG10Q8N0Z9 540 aa18.64■□□□□ 0.57
COL5A3-202ENST00000461214 DNAJC5GQ8N7S2 189 aa18.64■□□□□ 0.57
COL5A3-202ENST00000461214 CDCA7LQ96GN5 454 aa18.64■□□□□ 0.57
COL5A3-202ENST00000461214 CD2APQ9Y5K6 639 aa18.64■□□□□ 0.57
COL5A3-202ENST00000461214 MIS18AQ9NYP9 233 aa18.63■□□□□ 0.57
COL5A3-202ENST00000461214 ANKRD36CQ5JPF3 1778 aa18.63■□□□□ 0.57
COL5A3-202ENST00000461214 ZNF496Q96IT1 587 aaPredicted RBP18.62■□□□□ 0.57
COL5A3-202ENST00000461214 SCN7AQ01118 1682 aa18.62■□□□□ 0.57
COL5A3-202ENST00000461214 ARFGEF2Q9Y6D5 1785 aa18.61■□□□□ 0.57
COL5A3-202ENST00000461214 CT47B1P0C2W7 299 aaPredicted RBP18.61■□□□□ 0.57
COL5A3-202ENST00000461214 HMGB2P26583 209 aaKnown RBP18.61■□□□□ 0.57
COL5A3-202ENST00000461214 LOC102724428A0A0B4J2F2 783 aa18.6■□□□□ 0.57
COL5A3-202ENST00000461214 KCNQ3O43525 872 aa18.6■□□□□ 0.57
COL5A3-202ENST00000461214 SIK1P57059 783 aa18.6■□□□□ 0.57
COL5A3-202ENST00000461214 TNS4Q8IZW8 715 aa18.6■□□□□ 0.57
COL5A3-202ENST00000461214 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
COL5A3-202ENST00000461214 HTRA3P83110 453 aa18.59■□□□□ 0.57
COL5A3-202ENST00000461214 CHMP4AQ9BY43 222 aa18.59■□□□□ 0.57
COL5A3-202ENST00000461214 PTCD1O75127 700 aaKnown RBP18.58■□□□□ 0.56
COL5A3-202ENST00000461214 EXOSC9Q06265 439 aaKnown RBP18.58■□□□□ 0.56
COL5A3-202ENST00000461214 ZNF428Q96B54 188 aa18.58■□□□□ 0.56
COL5A3-202ENST00000461214 RBM42Q9BTD8 480 aaKnown RBP18.58■□□□□ 0.56
COL5A3-202ENST00000461214 TEX13AQ9BXU3 409 aaPredicted RBP18.58■□□□□ 0.56
COL5A3-202ENST00000461214 NUP98P52948 1817 aa18.58■□□□□ 0.56
COL5A3-202ENST00000461214 TOMM70O94826 608 aa18.57■□□□□ 0.56
COL5A3-202ENST00000461214 TWISTNBQ3B726 338 aaPredicted RBP18.57■□□□□ 0.56
COL5A3-202ENST00000461214 AFDNP55196 1824 aaKnown RBP18.57■□□□□ 0.56
COL5A3-202ENST00000461214 ERBB4Q15303 1308 aa18.56■□□□□ 0.56
COL5A3-202ENST00000461214 ATP6V1AP38606 617 aa18.55■□□□□ 0.56
COL5A3-202ENST00000461214 PRELPP51888 382 aa18.55■□□□□ 0.56
COL5A3-202ENST00000461214 KRT24Q2M2I5 525 aa18.55■□□□□ 0.56
COL5A3-202ENST00000461214 C8orf58Q8NAV2 365 aa18.55■□□□□ 0.56
COL5A3-202ENST00000461214 SLC4A9Q96Q91 983 aa18.55■□□□□ 0.56
COL5A3-202ENST00000461214 CNTNAP4Q9C0A0 1308 aa18.54■□□□□ 0.56
COL5A3-202ENST00000461214 TSPYL6Q8N831 410 aa18.53■□□□□ 0.56
COL5A3-202ENST00000461214 NMRK2Q9NPI5 230 aa18.53■□□□□ 0.56
COL5A3-202ENST00000461214 STARD3NLO95772 234 aa18.52■□□□□ 0.56
COL5A3-202ENST00000461214 HDGFL1Q5TGJ6 251 aa18.52■□□□□ 0.56
COL5A3-202ENST00000461214 DNAJC10Q8IXB1 793 aa18.52■□□□□ 0.56
COL5A3-202ENST00000461214 KLRG1Q96E93 195 aa18.52■□□□□ 0.56
COL5A3-202ENST00000461214 WDR90Q96KV7 1748 aa18.52■□□□□ 0.55
COL5A3-202ENST00000461214 VAMP4O75379 141 aa18.51■□□□□ 0.55
COL5A3-202ENST00000461214 PHF14O94880 888 aa18.51■□□□□ 0.55
COL5A3-202ENST00000461214 ITPK1Q13572 414 aa18.51■□□□□ 0.55
COL5A3-202ENST00000461214 CCDC30Q5VVM6 783 aa18.51■□□□□ 0.55
COL5A3-202ENST00000461214 SMIM5Q71RC9 77 aa18.51■□□□□ 0.55
COL5A3-202ENST00000461214 PRAMEF22A3QJZ6 481 aa18.5■□□□□ 0.55
COL5A3-202ENST00000461214 CYP19A1P11511 503 aaPredicted RBP18.5■□□□□ 0.55
COL5A3-202ENST00000461214 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
COL5A3-202ENST00000461214 FLAD1Q8NFF5 587 aa18.5■□□□□ 0.55
COL5A3-202ENST00000461214 ELL2O00472 640 aaPredicted RBP18.49■□□□□ 0.55
COL5A3-202ENST00000461214 C16orf71Q8IYS4 520 aaPredicted RBP18.49■□□□□ 0.55
COL5A3-202ENST00000461214 LINC00116Q8NCU8 138 aa18.49■□□□□ 0.55
COL5A3-202ENST00000461214 USP16Q9Y5T5 823 aa18.49■□□□□ 0.55
COL5A3-202ENST00000461214 CRKLP46109 303 aaKnown RBP18.48■□□□□ 0.55
COL5A3-202ENST00000461214 RC3H1Q5TC82 1133 aaKnown RBP18.48■□□□□ 0.55
COL5A3-202ENST00000461214 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
COL5A3-202ENST00000461214 CCDC87Q9NVE4 849 aa18.48■□□□□ 0.55
COL5A3-202ENST00000461214 DBF4Q9UBU7 674 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms