RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 TMEM2Q9UHN6 1383 aa7.17□□□□□ -1.26
CNN3-204ENST00000461018 ARHGAP35Q9NRY4 1499 aa7.17□□□□□ -1.26
CNN3-204ENST00000461018 MBD5Q9P267 1494 aa7.17□□□□□ -1.26
CNN3-204ENST00000461018 IL27Q8NEV9 243 aa7.16□□□□□ -1.26
CNN3-204ENST00000461018 ZFP42Q96MM3 310 aa7.16□□□□□ -1.26
CNN3-204ENST00000461018 FMN1Q68DA7 1419 aa7.16□□□□□ -1.26
CNN3-204ENST00000461018 PLEKHG3A1L390 1219 aa7.15□□□□□ -1.26
CNN3-204ENST00000461018 SH3BP2P78314 561 aa7.15□□□□□ -1.26
CNN3-204ENST00000461018 SKIV2LQ15477 1246 aaKnown RBP7.15□□□□□ -1.26
CNN3-204ENST00000461018 HELBQ8NG08 1087 aaPredicted RBP7.15□□□□□ -1.26
CNN3-204ENST00000461018 MAP10Q9P2G4 905 aa7.15□□□□□ -1.26
CNN3-204ENST00000461018 TRPC5Q9UL62 973 aaPredicted RBP7.15□□□□□ -1.26
CNN3-204ENST00000461018 PNPLA6Q8IY17 1366 aa7.15□□□□□ -1.26
CNN3-204ENST00000461018 ATRNO75882 1429 aa7.15□□□□□ -1.27
CNN3-204ENST00000461018 ABCC3O15438 1527 aa7.15□□□□□ -1.27
CNN3-204ENST00000461018 NWD1Q149M9 1564 aa7.15□□□□□ -1.27
CNN3-204ENST00000461018 NHSL1Q5SYE7 1610 aa7.15□□□□□ -1.27
CNN3-204ENST00000461018 NKTRP30414 1462 aaKnown RBP7.14□□□□□ -1.27
CNN3-204ENST00000461018 BLMP54132 1417 aaPredicted RBP7.14□□□□□ -1.27
CNN3-204ENST00000461018 R3HDM1Q15032 1099 aaKnown RBP7.14□□□□□ -1.27
CNN3-204ENST00000461018 TUSC1Q2TAM9 212 aa7.14□□□□□ -1.27
CNN3-204ENST00000461018 SH3D19Q5HYK7 790 aa7.14□□□□□ -1.27
CNN3-204ENST00000461018 C14orf37Q86TY3 774 aa7.14□□□□□ -1.27
CNN3-204ENST00000461018 SETD5Q9C0A6 1442 aa7.14□□□□□ -1.27
CNN3-204ENST00000461018 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.14□□□□□ -1.27
CNN3-204ENST00000461018 PIK3C2BO00750 1634 aa7.13□□□□□ -1.27
CNN3-204ENST00000461018 RTEL1-TNFRSF6BF6WH68 1400 aa7.13□□□□□ -1.27
CNN3-204ENST00000461018 AGERQ15109 404 aa7.13□□□□□ -1.27
CNN3-204ENST00000461018 FNBP4Q8N3X1 1017 aaPredicted RBP7.13□□□□□ -1.27
CNN3-204ENST00000461018 ZNF784Q8NCA9 323 aaPredicted RBP7.13□□□□□ -1.27
CNN3-204ENST00000461018 VSIG8P0DPA2 414 aa7.12□□□□□ -1.27
CNN3-204ENST00000461018 ATF3P18847 181 aa7.12□□□□□ -1.27
CNN3-204ENST00000461018 CTDSPL2Q05D32 466 aa7.12□□□□□ -1.27
CNN3-204ENST00000461018 KCNMA1Q12791 1236 aa7.12□□□□□ -1.27
CNN3-204ENST00000461018 IDI1Q13907 227 aa7.12□□□□□ -1.27
CNN3-204ENST00000461018 SCARF1Q14162 830 aa7.12□□□□□ -1.27
CNN3-204ENST00000461018 ZNF511Q8NB15 262 aa7.12□□□□□ -1.27
CNN3-204ENST00000461018 LRRC59Q96AG4 307 aaKnown RBP7.12□□□□□ -1.27
CNN3-204ENST00000461018 C19orf44Q9H6X5 657 aa7.12□□□□□ -1.27
CNN3-204ENST00000461018 CHD2O14647 1828 aaKnown RBP7.12□□□□□ -1.27
CNN3-204ENST00000461018 PLEKHH2Q8IVE3 1493 aa7.11□□□□□ -1.27
CNN3-204ENST00000461018 EEA1Q15075 1411 aa7.11□□□□□ -1.27
CNN3-204ENST00000461018 BRWD3Q6RI45 1802 aa7.11□□□□□ -1.27
CNN3-204ENST00000461018 C1QTNF8P60827 252 aa7.11□□□□□ -1.27
CNN3-204ENST00000461018 ASXL1Q8IXJ9 1541 aa7.11□□□□□ -1.27
CNN3-204ENST00000461018 CEP152O94986 1710 aa7.1□□□□□ -1.27
CNN3-204ENST00000461018 CCNB3Q8WWL7 1395 aa7.1□□□□□ -1.27
CNN3-204ENST00000461018 AP1G2O75843 785 aa7.1□□□□□ -1.27
CNN3-204ENST00000461018 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
CNN3-204ENST00000461018 BRPF1P55201 1214 aaPredicted RBP7.1□□□□□ -1.27
CNN3-204ENST00000461018 MRPL14Q6P1L8 145 aaKnown RBP7.1□□□□□ -1.27
CNN3-204ENST00000461018 GJD4Q96KN9 370 aaPredicted RBP7.1□□□□□ -1.27
CNN3-204ENST00000461018 MROH1Q8NDA8 1641 aa7.09□□□□□ -1.27
CNN3-204ENST00000461018 PRKCSHP14314 528 aaPredicted RBP7.09□□□□□ -1.27
CNN3-204ENST00000461018 ARID5BQ14865 1188 aa7.09□□□□□ -1.27
CNN3-204ENST00000461018 KCTD17Q8N5Z5 321 aa7.09□□□□□ -1.27
CNN3-204ENST00000461018 FOXJ1Q92949 421 aa7.09□□□□□ -1.27
CNN3-204ENST00000461018 PCMTD1Q96MG8 357 aaPredicted RBP7.09□□□□□ -1.27
CNN3-204ENST00000461018 TLL2Q9Y6L7 1015 aa7.09□□□□□ -1.27
CNN3-204ENST00000461018 CAMTA1Q9Y6Y1 1673 aa7.09□□□□□ -1.27
CNN3-204ENST00000461018 UBTFP17480 764 aaKnown RBP7.08□□□□□ -1.28
CNN3-204ENST00000461018 NNTQ13423 1086 aa7.08□□□□□ -1.28
CNN3-204ENST00000461018 MPNDQ8N594 471 aa7.08□□□□□ -1.28
CNN3-204ENST00000461018 LRRN4Q8WUT4 740 aa7.08□□□□□ -1.28
CNN3-204ENST00000461018 PURBQ96QR8 312 aaKnown RBP7.08□□□□□ -1.28
CNN3-204ENST00000461018 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.08□□□□□ -1.28
CNN3-204ENST00000461018 CAMSAP2Q08AD1 1489 aa7.08□□□□□ -1.28
CNN3-204ENST00000461018 VARSP26640 1264 aaKnown RBP7.07□□□□□ -1.28
CNN3-204ENST00000461018 SF3B2Q13435 895 aaKnown RBP7.07□□□□□ -1.28
CNN3-204ENST00000461018 MST1RQ04912 1400 aa7.07□□□□□ -1.28
CNN3-204ENST00000461018 CASKIN1Q8WXD9 1431 aa7.07□□□□□ -1.28
CNN3-204ENST00000461018 GLI3P10071 1580 aa7.07□□□□□ -1.28
CNN3-204ENST00000461018 EFCAB6Q5THR3 1501 aa7.06□□□□□ -1.28
CNN3-204ENST00000461018 ADH1CP00326 375 aa7.06□□□□□ -1.28
CNN3-204ENST00000461018 FAM182BQ5T319 152 aa7.06□□□□□ -1.28
CNN3-204ENST00000461018 SEPT12Q8IYM1 358 aa7.06□□□□□ -1.28
CNN3-204ENST00000461018 TMEM151AQ8N4L1 468 aa7.06□□□□□ -1.28
CNN3-204ENST00000461018 ARMC2Q8NEN0 867 aa7.06□□□□□ -1.28
CNN3-204ENST00000461018 FAM174AQ8TBP5 190 aa7.06□□□□□ -1.28
CNN3-204ENST00000461018 PTPRUQ92729 1446 aa7.06□□□□□ -1.28
CNN3-204ENST00000461018 NCOA3Q9Y6Q9 1424 aa7.06□□□□□ -1.28
CNN3-204ENST00000461018 CCDC18Q5T9S5 1454 aa7.05□□□□□ -1.28
CNN3-204ENST00000461018 RALGAPBQ86X10 1494 aa7.05□□□□□ -1.28
CNN3-204ENST00000461018 MAGEB6P1A0A0J9YX57 407 aa7.05□□□□□ -1.28
CNN3-204ENST00000461018 TIMP2P16035 220 aa7.05□□□□□ -1.28
CNN3-204ENST00000461018 WDR4P57081 412 aaKnown RBP7.05□□□□□ -1.28
CNN3-204ENST00000461018 EZH2Q15910 746 aaKnown RBP7.05□□□□□ -1.28
CNN3-204ENST00000461018 BPHLQ86WA6 291 aaPredicted RBP7.05□□□□□ -1.28
CNN3-204ENST00000461018 TBX22Q9Y458 520 aa7.05□□□□□ -1.28
CNN3-204ENST00000461018 CEP350Q5VT06 3117 aa7.05□□□□□ -1.28
CNN3-204ENST00000461018 SOBPA7XYQ1 873 aa7.04□□□□□ -1.28
CNN3-204ENST00000461018 MAN1A2O60476 641 aa7.04□□□□□ -1.28
CNN3-204ENST00000461018 RFC5P40937 340 aa7.04□□□□□ -1.28
CNN3-204ENST00000461018 GSK3AP49840 483 aa7.04□□□□□ -1.28
CNN3-204ENST00000461018 NR6A1Q15406 480 aa7.04□□□□□ -1.28
CNN3-204ENST00000461018 NBPF14Q5TI25 921 aa7.04□□□□□ -1.28
CNN3-204ENST00000461018 PPP2R2DQ66LE6 453 aa7.04□□□□□ -1.28
CNN3-204ENST00000461018 CARD14Q9BXL6 1004 aa7.04□□□□□ -1.28
CNN3-204ENST00000461018 AMOTL2Q9Y2J4 779 aa7.04□□□□□ -1.28
CNN3-204ENST00000461018 UTRNP46939 3433 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms