RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 ZNF496Q96IT1 587 aaPredicted RBP17.03■□□□□ 0.32
SHISA5-211ENST00000460758 SRP68Q9UHB9 627 aaKnown RBP17.03■□□□□ 0.32
SHISA5-211ENST00000460758 YBX3P16989 372 aaKnown RBP eCLIP17.02■□□□□ 0.326e-10■□□□□ 9.8
SHISA5-211ENST00000460758 MCM10Q7L590 875 aa17.02■□□□□ 0.32
SHISA5-211ENST00000460758 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
SHISA5-211ENST00000460758 ZBTB1Q9Y2K1 713 aa17.02■□□□□ 0.32
SHISA5-211ENST00000460758 COL15A1P39059 1388 aa17.02■□□□□ 0.31
SHISA5-211ENST00000460758 NRXN2Q9P2S2 1712 aa17.01■□□□□ 0.31
SHISA5-211ENST00000460758 PXDNLA1KZ92 1463 aa17.01■□□□□ 0.31
SHISA5-211ENST00000460758 NLGN1Q8N2Q7 840 aa17.01■□□□□ 0.31
SHISA5-211ENST00000460758 PLEKHF1Q96S99 279 aa17.01■□□□□ 0.31
SHISA5-211ENST00000460758 KCNQ3O43525 872 aa17■□□□□ 0.31
SHISA5-211ENST00000460758 DCTN1Q14203 1278 aa17■□□□□ 0.31
SHISA5-211ENST00000460758 BTBD11A6QL63 1104 aa16.98■□□□□ 0.31
SHISA5-211ENST00000460758 FKBP8Q14318 412 aa16.98■□□□□ 0.31
SHISA5-211ENST00000460758 CCDC184Q52MB2 194 aa16.98■□□□□ 0.31
SHISA5-211ENST00000460758 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
SHISA5-211ENST00000460758 ARFGEF1Q9Y6D6 1849 aa16.98■□□□□ 0.31
SHISA5-211ENST00000460758 DLEC1Q9Y238 1755 aa16.97■□□□□ 0.31
SHISA5-211ENST00000460758 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
SHISA5-211ENST00000460758 DDR1Q08345 913 aa16.97■□□□□ 0.31
SHISA5-211ENST00000460758 USPL1Q5W0Q7 1092 aa16.97■□□□□ 0.31
SHISA5-211ENST00000460758 MIER1Q8N108 512 aa16.97■□□□□ 0.31
SHISA5-211ENST00000460758 FMNL2Q96PY5 1086 aa16.97■□□□□ 0.31
SHISA5-211ENST00000460758 CANXP27824 592 aaKnown RBP16.96■□□□□ 0.31
SHISA5-211ENST00000460758 WWC3Q9ULE0 1092 aa16.96■□□□□ 0.31
SHISA5-211ENST00000460758 STARD3NLO95772 234 aa16.95■□□□□ 0.3
SHISA5-211ENST00000460758 NFE2L2Q16236 605 aa16.95■□□□□ 0.3
SHISA5-211ENST00000460758 MRS2Q9HD23 443 aa16.95■□□□□ 0.3
SHISA5-211ENST00000460758 NARFQ9UHQ1 456 aa16.95■□□□□ 0.3
SHISA5-211ENST00000460758 PARP3Q9Y6F1 533 aa16.95■□□□□ 0.3
SHISA5-211ENST00000460758 ANKRD31Q8N7Z5 1873 aa16.95■□□□□ 0.3
SHISA5-211ENST00000460758 PRAMEF22A3QJZ6 481 aa16.94■□□□□ 0.3
SHISA5-211ENST00000460758 ZPR1O75312 459 aa16.94■□□□□ 0.3
SHISA5-211ENST00000460758 NEFMP07197 916 aa16.94■□□□□ 0.3
SHISA5-211ENST00000460758 EIF5P55010 431 aaKnown RBP16.94■□□□□ 0.3
SHISA5-211ENST00000460758 BCL2L12Q9HB09 334 aa16.94■□□□□ 0.3
SHISA5-211ENST00000460758 MAPK8IP3Q9UPT6 1336 aa16.94■□□□□ 0.3
SHISA5-211ENST00000460758 CCER2I3L3R5 266 aa16.93■□□□□ 0.3
SHISA5-211ENST00000460758 POLRMTO00411 1230 aaKnown RBP16.93■□□□□ 0.3
SHISA5-211ENST00000460758 TEX13AQ9BXU3 409 aaPredicted RBP16.93■□□□□ 0.3
SHISA5-211ENST00000460758 GRIN3BO60391 1043 aa16.92■□□□□ 0.3
SHISA5-211ENST00000460758 TM4SF1P30408 202 aa16.92■□□□□ 0.3
SHISA5-211ENST00000460758 THUMPD2Q9BTF0 503 aaKnown RBP16.92■□□□□ 0.3
SHISA5-211ENST00000460758 COL11A2P13942 1736 aaPredicted RBP16.91■□□□□ 0.3
SHISA5-211ENST00000460758 A1BGP04217 495 aa16.91■□□□□ 0.3
SHISA5-211ENST00000460758 NFIXQ14938 502 aa16.91■□□□□ 0.3
SHISA5-211ENST00000460758 TAF7Q15545 349 aaPredicted RBP16.91■□□□□ 0.3
SHISA5-211ENST00000460758 PNNQ9H307 717 aaKnown RBP16.91■□□□□ 0.3
SHISA5-211ENST00000460758 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
SHISA5-211ENST00000460758 IL6STP40189 918 aaPredicted RBP16.9■□□□□ 0.3
SHISA5-211ENST00000460758 TGFB2P61812 414 aa16.9■□□□□ 0.3
SHISA5-211ENST00000460758 ZNF784Q8NCA9 323 aaPredicted RBP16.9■□□□□ 0.3
SHISA5-211ENST00000460758 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
SHISA5-211ENST00000460758 ZNF330Q9Y3S2 320 aaPredicted RBP16.9■□□□□ 0.3
SHISA5-211ENST00000460758 A0A0G2JLW4 131 aa16.89■□□□□ 0.29
SHISA5-211ENST00000460758 SNRPA1P09661 255 aaKnown RBP16.89■□□□□ 0.29
SHISA5-211ENST00000460758 DPEP1P16444 411 aa16.89■□□□□ 0.29
SHISA5-211ENST00000460758 PIP4K2AP48426 406 aaPredicted RBP16.89■□□□□ 0.29
SHISA5-211ENST00000460758 WDR43Q15061 677 aaKnown RBP eCLIP16.89■□□□□ 0.29
SHISA5-211ENST00000460758 A0A087WZG4 1122 aa16.88■□□□□ 0.29
SHISA5-211ENST00000460758 TBC1D2BQ9UPU7 963 aa16.88■□□□□ 0.29
SHISA5-211ENST00000460758 NUP98P52948 1817 aa16.88■□□□□ 0.29
SHISA5-211ENST00000460758 CACNA1SQ13698 1873 aa16.88■□□□□ 0.29
SHISA5-211ENST00000460758 CARMIL3Q8ND23 1372 aa16.88■□□□□ 0.29
SHISA5-211ENST00000460758 KCNA3P22001 575 aa16.87■□□□□ 0.29
SHISA5-211ENST00000460758 CCDC146Q8IYE0 955 aa16.87■□□□□ 0.29
SHISA5-211ENST00000460758 PNISRQ8TF01 805 aaKnown RBP16.87■□□□□ 0.29
SHISA5-211ENST00000460758 CAMTA2O94983 1202 aa16.86■□□□□ 0.29
SHISA5-211ENST00000460758 TMPOP42166 694 aaKnown RBP16.86■□□□□ 0.29
SHISA5-211ENST00000460758 ADCY9O60503 1353 aa16.86■□□□□ 0.29
SHISA5-211ENST00000460758 SBF1O95248 1867 aa16.85■□□□□ 0.29
SHISA5-211ENST00000460758 NBPF26B4DH59 902 aa16.85■□□□□ 0.29
SHISA5-211ENST00000460758 SERPINB2P05120 415 aa16.85■□□□□ 0.29
SHISA5-211ENST00000460758 RIPK4P57078 832 aa16.85■□□□□ 0.29
SHISA5-211ENST00000460758 TBC1D9BQ66K14 1250 aa16.85■□□□□ 0.29
SHISA5-211ENST00000460758 NBPF10Q6P3W6 841 aaKnown RBP16.85■□□□□ 0.29
SHISA5-211ENST00000460758 BICDL1Q6ZP65 573 aa16.85■□□□□ 0.29
SHISA5-211ENST00000460758 NBPF15Q8N660 670 aa16.85■□□□□ 0.29
SHISA5-211ENST00000460758 ADAMTS8Q9UP79 889 aa16.85■□□□□ 0.29
SHISA5-211ENST00000460758 ARFGEF2Q9Y6D5 1785 aa16.84■□□□□ 0.29
SHISA5-211ENST00000460758 CHRNA5P30532 468 aa16.84■□□□□ 0.29
SHISA5-211ENST00000460758 EIF4A1P60842 406 aaKnown RBP16.84■□□□□ 0.29
SHISA5-211ENST00000460758 DZIP3Q86Y13 1208 aaKnown RBP16.84■□□□□ 0.29
SHISA5-211ENST00000460758 BCS1LQ9Y276 419 aa16.84■□□□□ 0.29
SHISA5-211ENST00000460758 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
SHISA5-211ENST00000460758 GIGYF1O75420 1035 aaPredicted RBP16.83■□□□□ 0.28
SHISA5-211ENST00000460758 ATP10DQ9P241 1426 aa16.83■□□□□ 0.28
SHISA5-211ENST00000460758 RUNDC1Q96C34 613 aa16.82■□□□□ 0.28
SHISA5-211ENST00000460758 CCDC88AQ3V6T2 1871 aa16.82■□□□□ 0.28
SHISA5-211ENST00000460758 LMOD3Q0VAK6 560 aa16.81■□□□□ 0.28
SHISA5-211ENST00000460758 NPM2Q86SE8 214 aaKnown RBP16.81■□□□□ 0.28
SHISA5-211ENST00000460758 FAM9BQ8IZU0 186 aa16.81■□□□□ 0.28
SHISA5-211ENST00000460758 ANKRD36CQ5JPF3 1778 aa16.81■□□□□ 0.28
SHISA5-211ENST00000460758 NEUROD2Q15784 382 aa16.8■□□□□ 0.28
SHISA5-211ENST00000460758 PIM2Q9P1W9 311 aa16.8■□□□□ 0.28
SHISA5-211ENST00000460758 TSPYL4Q9UJ04 414 aa16.8■□□□□ 0.28
SHISA5-211ENST00000460758 TRIM35Q9UPQ4 493 aa16.8■□□□□ 0.28
SHISA5-211ENST00000460758 TNRC6CQ9HCJ0 1690 aaKnown RBP16.8■□□□□ 0.28
SHISA5-211ENST00000460758 PRR5LQ6MZQ0 368 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms