RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 DDX54Q8TDD1 881 aaKnown RBP7.45□□□□□ -1.22
HLA-DQA1-205ENST00000460633 NYXQ9GZU5 481 aa7.45□□□□□ -1.22
HLA-DQA1-205ENST00000460633 GRPEL1Q9HAV7 217 aa7.45□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CNNM1Q9NRU3 951 aa7.45□□□□□ -1.22
HLA-DQA1-205ENST00000460633 AMOTQ4VCS5 1084 aa7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 SCLT1Q96NL6 688 aa7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 IFIT2P09913 472 aaKnown RBP7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 TPD52L1Q16890 204 aaPredicted RBP7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 MTERF4Q7Z6M4 381 aaKnown RBP7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 VTI1AQ96AJ9 217 aa7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 API5Q9BZZ5 524 aaKnown RBP7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 NWD1Q149M9 1564 aa7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 ZNF592Q92610 1267 aa7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CABP1Q9NZU7 370 aa7.44□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CCDC173Q0VFZ6 552 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CRACR2BQ8N4Y2 399 aaPredicted RBP7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CABP5Q9NP86 173 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 NPC1L1Q9UHC9 1359 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 NEBLO76041 1014 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CCDC158Q5M9N0 1113 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 PDZRN3Q9UPQ7 1066 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 ESPNB1AK53 854 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CCDC39Q9UFE4 941 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 TRPC5Q9UL62 973 aaPredicted RBP7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 GLRX3O76003 335 aaKnown RBP7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 SPTY2D1Q68D10 685 aaPredicted RBP7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 SLC4A10Q6U841 1118 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 ZNF622Q969S3 477 aaKnown RBP eCLIP7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 ADAMTS8Q9UP79 889 aa7.43□□□□□ -1.22
HLA-DQA1-205ENST00000460633 GRM1Q13255 1194 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CAVIN4Q5BKX8 364 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CT47A1Q5JQC4 288 aaPredicted RBP7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 PPP1R42Q7Z4L9 355 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 GSTO1P78417 241 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CCDC70Q6NSX1 233 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 NFXL1Q6ZNB6 911 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 UTP14AQ9BVJ6 771 aaKnown RBP7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 ACEP12821 1306 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 PSMD1Q99460 953 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 HIP1O00291 1037 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 GNAI1P63096 354 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CAVIN1Q6NZI2 390 aaKnown RBP7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 LRSAM1Q6UWE0 723 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 WAPLQ7Z5K2 1190 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 RNF214Q8ND24 703 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 RNF216Q9NWF9 866 aaPredicted RBP7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 TFCP2L1Q9NZI6 479 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 ADAMTS13Q76LX8 1427 aa7.42□□□□□ -1.22
HLA-DQA1-205ENST00000460633 RALYLQ86SE5 291 aaKnown RBP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 DZIP1LQ8IYY4 767 aaKnown RBP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 THRAP3Q9Y2W1 955 aaKnown RBP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 NUCB2P80303 420 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CUL5Q93034 780 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 BLMP54132 1417 aaPredicted RBP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 SF3A1Q15459 793 aaKnown RBP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 DDX46Q7L014 1031 aaKnown RBP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 TSPYL2Q9H2G4 693 aaPredicted RBP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 SPC25Q9HBM1 224 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 HLA-DOAP06340 250 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 MCM4P33991 863 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 NBPF1Q3BBV0 1214 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 WDR78Q5VTH9 848 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 NSD3Q9BZ95 1437 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 ZNF335Q9H4Z2 1342 aaPredicted RBP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CPLX1O14810 134 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 PABPC4Q13310 644 aaKnown RBP eCLIP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CCDC30Q5VVM6 783 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 CCDC117Q8IWD4 279 aaPredicted RBP7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 DDX19BQ9UMR2 479 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 ATP6V1DQ9Y5K8 247 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 TNS3Q68CZ2 1445 aa7.41□□□□□ -1.22
HLA-DQA1-205ENST00000460633 METP08581 1390 aa7.4□□□□□ -1.22
HLA-DQA1-205ENST00000460633 ASXL1Q8IXJ9 1541 aa7.4□□□□□ -1.22
HLA-DQA1-205ENST00000460633 UQCRHLA0A096LP55 91 aa7.4□□□□□ -1.22
HLA-DQA1-205ENST00000460633 UQCRHP07919 91 aa7.4□□□□□ -1.22
HLA-DQA1-205ENST00000460633 EIF2S2P20042 333 aaKnown RBP7.4□□□□□ -1.22
HLA-DQA1-205ENST00000460633 GOLGA6L1Q8N7Z2 621 aa7.4□□□□□ -1.22
HLA-DQA1-205ENST00000460633 LNPKQ9C0E8 428 aa7.4□□□□□ -1.22
HLA-DQA1-205ENST00000460633 DIAPH3Q9NSV4 1193 aa7.4□□□□□ -1.22
HLA-DQA1-205ENST00000460633 PLEKHG2Q9H7P9 1386 aa7.4□□□□□ -1.22
HLA-DQA1-205ENST00000460633 GRIN3BO60391 1043 aa7.4□□□□□ -1.23
HLA-DQA1-205ENST00000460633 BICDL1Q6ZP65 573 aa7.4□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ZGPATQ8N5A5 531 aaKnown RBP7.4□□□□□ -1.23
HLA-DQA1-205ENST00000460633 TSPYL4Q9UJ04 414 aa7.4□□□□□ -1.23
HLA-DQA1-205ENST00000460633 POLR3AO14802 1390 aaPredicted RBP7.4□□□□□ -1.23
HLA-DQA1-205ENST00000460633 NCBP1Q09161 790 aaKnown RBP7.4□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CDK5RAP3Q96JB5 506 aa7.4□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CDC5LQ99459 802 aaKnown RBP7.4□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ZKSCAN1P17029 563 aaPredicted RBP7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 DDB1Q16531 1140 aa7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 FAM184AQ8NB25 1140 aa7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 LRRCC1Q9C099 1032 aa7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ADGRB2O60241 1585 aa7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ELL2O00472 640 aaPredicted RBP7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 BCAR3O75815 825 aa7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 IPO7O95373 1038 aaKnown RBP7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 LRRC45Q96CN5 670 aa7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CFAP65Q6ZU64 1925 aaKnown RBP7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 MTHFSP49914 203 aa7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 TRIM22Q8IYM9 498 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms