RNA–Protein interactions for RNA: ENST00000460331.5

ZNF3-211, Transcript of zinc finger protein 3, humanhuman

TSL 4

Gene ZNF3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-211ENST00000460331 DDX21Q9NR30 783 aaKnown RBP eCLIP15.95■□□□□ 0.14
ZNF3-211ENST00000460331 HYPKQ9NX55 129 aa15.95■□□□□ 0.14
ZNF3-211ENST00000460331 ZNF831Q5JPB2 1677 aa15.95■□□□□ 0.14
ZNF3-211ENST00000460331 TCERG1O14776 1098 aaKnown RBP15.94■□□□□ 0.14
ZNF3-211ENST00000460331 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
ZNF3-211ENST00000460331 NPM2Q86SE8 214 aaKnown RBP15.94■□□□□ 0.14
ZNF3-211ENST00000460331 BCL2L13Q9BXK5 485 aa15.94■□□□□ 0.14
ZNF3-211ENST00000460331 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
ZNF3-211ENST00000460331 LAMB4A4D0S4 1761 aa15.93■□□□□ 0.14
ZNF3-211ENST00000460331 BCAR3O75815 825 aa15.93■□□□□ 0.14
ZNF3-211ENST00000460331 ITPK1Q13572 414 aa15.93■□□□□ 0.14
ZNF3-211ENST00000460331 TXNRD1Q16881 649 aa15.93■□□□□ 0.14
ZNF3-211ENST00000460331 RC3H1Q5TC82 1133 aaKnown RBP15.93■□□□□ 0.14
ZNF3-211ENST00000460331 LY75O60449 1722 aa15.93■□□□□ 0.14
ZNF3-211ENST00000460331 CICQ96RK0 1608 aaPredicted RBP15.93■□□□□ 0.14
ZNF3-211ENST00000460331 C5P01031 1676 aa15.92■□□□□ 0.14
ZNF3-211ENST00000460331 A1BGP04217 495 aa15.92■□□□□ 0.14
ZNF3-211ENST00000460331 CCDC87Q9NVE4 849 aa15.92■□□□□ 0.14
ZNF3-211ENST00000460331 SUPT16HQ9Y5B9 1047 aaKnown RBP15.92■□□□□ 0.14
ZNF3-211ENST00000460331 MS4A1P11836 297 aa15.91■□□□□ 0.14
ZNF3-211ENST00000460331 MYL6BP14649 208 aa15.91■□□□□ 0.14
ZNF3-211ENST00000460331 CRKLP46109 303 aaKnown RBP15.91■□□□□ 0.14
ZNF3-211ENST00000460331 ZKSCAN2Q63HK3 967 aa15.91■□□□□ 0.14
ZNF3-211ENST00000460331 ARHGAP45Q92619 1136 aa15.91■□□□□ 0.14
ZNF3-211ENST00000460331 FRAT1Q92837 279 aaPredicted RBP15.91■□□□□ 0.14
ZNF3-211ENST00000460331 PTPRCP08575 1304 aa15.91■□□□□ 0.14
ZNF3-211ENST00000460331 CNTNAP4Q9C0A0 1308 aa15.91■□□□□ 0.14
ZNF3-211ENST00000460331 TJP1Q07157 1748 aa15.91■□□□□ 0.14
ZNF3-211ENST00000460331 TNS1Q9HBL0 1735 aaKnown RBP15.91■□□□□ 0.14
ZNF3-211ENST00000460331 DDX58O95786 925 aaKnown RBP15.9■□□□□ 0.14
ZNF3-211ENST00000460331 IL6STP40189 918 aaPredicted RBP15.9■□□□□ 0.14
ZNF3-211ENST00000460331 PDIA6Q15084 440 aa15.9■□□□□ 0.14
ZNF3-211ENST00000460331 API5Q9BZZ5 524 aaKnown RBP15.9■□□□□ 0.14
ZNF3-211ENST00000460331 NOB1Q9ULX3 412 aaKnown RBP15.9■□□□□ 0.14
ZNF3-211ENST00000460331 RRP1P56182 461 aaKnown RBP15.89■□□□□ 0.13
ZNF3-211ENST00000460331 FLIIQ13045 1269 aa15.89■□□□□ 0.13
ZNF3-211ENST00000460331 LINC00116Q8NCU8 138 aa15.89■□□□□ 0.13
ZNF3-211ENST00000460331 CAMKK2Q96RR4 588 aa15.89■□□□□ 0.13
ZNF3-211ENST00000460331 RGPD3A6NKT7 1758 aaPredicted RBP15.89■□□□□ 0.13
ZNF3-211ENST00000460331 RGPD4Q7Z3J3 1758 aa15.89■□□□□ 0.13
ZNF3-211ENST00000460331 CACNA1FO60840 1977 aa15.89■□□□□ 0.13
ZNF3-211ENST00000460331 A0A087WZG4 1122 aa15.88■□□□□ 0.13
ZNF3-211ENST00000460331 NBPF26B4DH59 902 aa15.88■□□□□ 0.13
ZNF3-211ENST00000460331 KCNQ4P56696 695 aa15.88■□□□□ 0.13
ZNF3-211ENST00000460331 EN1Q05925 392 aaPredicted RBP15.88■□□□□ 0.13
ZNF3-211ENST00000460331 NBPF14Q5TI25 921 aa15.88■□□□□ 0.13
ZNF3-211ENST00000460331 NBPF10Q6P3W6 841 aaKnown RBP15.88■□□□□ 0.13
ZNF3-211ENST00000460331 INTS5Q6P9B9 1019 aaKnown RBP15.88■□□□□ 0.13
ZNF3-211ENST00000460331 PROM2Q8N271 834 aa15.88■□□□□ 0.13
ZNF3-211ENST00000460331 NBPF15Q8N660 670 aa15.88■□□□□ 0.13
ZNF3-211ENST00000460331 AK7Q96M32 723 aa15.88■□□□□ 0.13
ZNF3-211ENST00000460331 PHAXQ9H814 394 aaKnown RBP15.88■□□□□ 0.13
ZNF3-211ENST00000460331 LRRC4BQ9NT99 713 aa15.88■□□□□ 0.13
ZNF3-211ENST00000460331 ZBTB1Q9Y2K1 713 aa15.88■□□□□ 0.13
ZNF3-211ENST00000460331 RPS6KA4O75676 772 aa15.87■□□□□ 0.13
ZNF3-211ENST00000460331 ANXA1P04083 346 aa15.87■□□□□ 0.13
ZNF3-211ENST00000460331 AIMP1Q12904 312 aaKnown RBP15.87■□□□□ 0.13
ZNF3-211ENST00000460331 FKBP5Q13451 457 aaPredicted RBP15.87■□□□□ 0.13
ZNF3-211ENST00000460331 EZH2Q15910 746 aaKnown RBP15.87■□□□□ 0.13
ZNF3-211ENST00000460331 PROSER3Q2NL68 480 aa15.87■□□□□ 0.13
ZNF3-211ENST00000460331 ATF7IPQ6VMQ6 1270 aa15.87■□□□□ 0.13
ZNF3-211ENST00000460331 COPS6Q7L5N1 327 aa15.87■□□□□ 0.13
ZNF3-211ENST00000460331 RTCBQ9Y3I0 505 aaKnown RBP15.87■□□□□ 0.13
ZNF3-211ENST00000460331 ZNF330Q9Y3S2 320 aaPredicted RBP15.87■□□□□ 0.13
ZNF3-211ENST00000460331 RNF123Q5XPI4 1314 aa15.87■□□□□ 0.13
ZNF3-211ENST00000460331 PIP4K2AP48426 406 aaPredicted RBP15.86■□□□□ 0.13
ZNF3-211ENST00000460331 G2E3Q7L622 706 aa15.86■□□□□ 0.13
ZNF3-211ENST00000460331 XAGE3Q8WTP9 111 aa15.86■□□□□ 0.13
ZNF3-211ENST00000460331 COL5A3P25940 1745 aaPredicted RBP15.85■□□□□ 0.13
ZNF3-211ENST00000460331 GNPATO15228 680 aa15.85■□□□□ 0.13
ZNF3-211ENST00000460331 EIF5P55010 431 aaKnown RBP15.85■□□□□ 0.13
ZNF3-211ENST00000460331 PDE3AQ14432 1141 aa15.85■□□□□ 0.13
ZNF3-211ENST00000460331 KIF6Q6ZMV9 814 aa15.85■□□□□ 0.13
ZNF3-211ENST00000460331 ANKRD13DQ6ZTN6 518 aa15.85■□□□□ 0.13
ZNF3-211ENST00000460331 LRP10Q7Z4F1 713 aa15.85■□□□□ 0.13
ZNF3-211ENST00000460331 FTSJ3Q8IY81 847 aaKnown RBP15.85■□□□□ 0.13
ZNF3-211ENST00000460331 UPF1Q92900 1129 aaKnown RBP eCLIP15.85■□□□□ 0.13
ZNF3-211ENST00000460331 ARXQ96QS3 562 aa15.85■□□□□ 0.13
ZNF3-211ENST00000460331 PLIN1O60240 522 aa15.84■□□□□ 0.13
ZNF3-211ENST00000460331 NEFLP07196 543 aa15.84■□□□□ 0.13
ZNF3-211ENST00000460331 KSR2Q6VAB6 950 aa15.84■□□□□ 0.13
ZNF3-211ENST00000460331 RIC3Q7Z5B4 369 aa15.84■□□□□ 0.13
ZNF3-211ENST00000460331 DEFB132Q7Z7B7 95 aa15.84■□□□□ 0.13
ZNF3-211ENST00000460331 DZIP1LQ8IYY4 767 aaKnown RBP15.84■□□□□ 0.13
ZNF3-211ENST00000460331 TAF1LQ8IZX4 1826 aa15.84■□□□□ 0.13
ZNF3-211ENST00000460331 C4BP0C0L5 1744 aa15.83■□□□□ 0.13
ZNF3-211ENST00000460331 TRIM27P14373 513 aa15.83■□□□□ 0.12
ZNF3-211ENST00000460331 ADRA2BP18089 450 aa15.83■□□□□ 0.12
ZNF3-211ENST00000460331 TRAPPC3LQ5T215 181 aa15.83■□□□□ 0.12
ZNF3-211ENST00000460331 DZIP3Q86Y13 1208 aaKnown RBP15.83■□□□□ 0.12
ZNF3-211ENST00000460331 FLAD1Q8NFF5 587 aa15.83■□□□□ 0.12
ZNF3-211ENST00000460331 PLBD2Q8NHP8 589 aa15.83■□□□□ 0.12
ZNF3-211ENST00000460331 RREB1Q92766 1687 aa15.83■□□□□ 0.12
ZNF3-211ENST00000460331 PI4KAP2A4QPH2 592 aa15.82■□□□□ 0.12
ZNF3-211ENST00000460331 SSFA2P28290 1259 aa15.82■□□□□ 0.12
ZNF3-211ENST00000460331 NEXNQ0ZGT2 675 aa15.82■□□□□ 0.12
ZNF3-211ENST00000460331 PI4KAP1Q8N8J0 262 aa15.82■□□□□ 0.12
ZNF3-211ENST00000460331 DNAAF4Q8WXU2 420 aa15.82■□□□□ 0.12
ZNF3-211ENST00000460331 STK32BQ9NY57 414 aa15.82■□□□□ 0.12
ZNF3-211ENST00000460331 ERVV-1B6SEH8 477 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms