RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 USP26Q9BXU7 913 aa18.67■□□□□ 0.58
LMNB1-203ENST00000460265 PA2G4Q9UQ80 394 aaKnown RBP18.67■□□□□ 0.58
LMNB1-203ENST00000460265 KAT6BQ8WYB5 2073 aa18.67■□□□□ 0.58
LMNB1-203ENST00000460265 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
LMNB1-203ENST00000460265 TAOK2Q9UL54 1235 aa18.67■□□□□ 0.58
LMNB1-203ENST00000460265 DDX58O95786 925 aaKnown RBP18.66■□□□□ 0.58
LMNB1-203ENST00000460265 DBF4Q9UBU7 674 aaPredicted RBP18.66■□□□□ 0.58
LMNB1-203ENST00000460265 DTNBO60941 627 aa18.66■□□□□ 0.58
LMNB1-203ENST00000460265 G3BP1Q13283 466 aaKnown RBP eCLIP18.66■□□□□ 0.583e-6■■■■□ 20.2
LMNB1-203ENST00000460265 STRN4Q9NRL3 753 aa18.66■□□□□ 0.58
LMNB1-203ENST00000460265 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
LMNB1-203ENST00000460265 BBXQ8WY36 941 aaPredicted RBP18.66■□□□□ 0.58
LMNB1-203ENST00000460265 AMOTQ4VCS5 1084 aa18.65■□□□□ 0.58
LMNB1-203ENST00000460265 AKAP4Q5JQC9 854 aa18.65■□□□□ 0.58
LMNB1-203ENST00000460265 EIF4A1P60842 406 aaKnown RBP18.65■□□□□ 0.58
LMNB1-203ENST00000460265 GAS2L3Q86XJ1 694 aa18.65■□□□□ 0.58
LMNB1-203ENST00000460265 USP31Q70CQ4 1352 aa18.64■□□□□ 0.58
LMNB1-203ENST00000460265 SMAP1Q8IYB5 467 aaPredicted RBP18.64■□□□□ 0.57
LMNB1-203ENST00000460265 ZGPATQ8N5A5 531 aaKnown RBP18.64■□□□□ 0.57
LMNB1-203ENST00000460265 RHPN1Q8TCX5 695 aa18.64■□□□□ 0.57
LMNB1-203ENST00000460265 AXIN2Q9Y2T1 843 aa18.64■□□□□ 0.57
LMNB1-203ENST00000460265 SPG7Q9UQ90 795 aa18.64■□□□□ 0.57
LMNB1-203ENST00000460265 UQCRHLA0A096LP55 91 aa18.63■□□□□ 0.57
LMNB1-203ENST00000460265 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
LMNB1-203ENST00000460265 UQCRHP07919 91 aa18.63■□□□□ 0.57
LMNB1-203ENST00000460265 SNX21Q969T3 373 aa18.63■□□□□ 0.57
LMNB1-203ENST00000460265 CCDC8Q9H0W5 538 aaPredicted RBP18.63■□□□□ 0.57
LMNB1-203ENST00000460265 PTCD1O75127 700 aaKnown RBP18.63■□□□□ 0.57
LMNB1-203ENST00000460265 PRPF40AO75400 957 aaKnown RBP18.63■□□□□ 0.57
LMNB1-203ENST00000460265 CCDC173Q0VFZ6 552 aa18.63■□□□□ 0.57
LMNB1-203ENST00000460265 PROSER3Q2NL68 480 aa18.63■□□□□ 0.57
LMNB1-203ENST00000460265 CRB1P82279 1406 aa18.63■□□□□ 0.57
LMNB1-203ENST00000460265 NASPP49321 788 aaPredicted RBP18.62■□□□□ 0.57
LMNB1-203ENST00000460265 AACSQ86V21 672 aa18.62■□□□□ 0.57
LMNB1-203ENST00000460265 GPATCH3Q96I76 525 aa18.62■□□□□ 0.57
LMNB1-203ENST00000460265 EVA1CP58658 441 aa18.62■□□□□ 0.57
LMNB1-203ENST00000460265 KIF1BPQ96EK5 621 aa18.62■□□□□ 0.57
LMNB1-203ENST00000460265 TOM1L2Q6ZVM7 507 aa18.61■□□□□ 0.57
LMNB1-203ENST00000460265 ATP5J2-PTCD1G3V325 749 aa18.61■□□□□ 0.57
LMNB1-203ENST00000460265 UNC5CLQ8IV45 518 aa18.61■□□□□ 0.57
LMNB1-203ENST00000460265 C19orf44Q9H6X5 657 aa18.61■□□□□ 0.57
LMNB1-203ENST00000460265 NAP1L2Q9ULW6 460 aaPredicted RBP18.61■□□□□ 0.57
LMNB1-203ENST00000460265 CAVIN1Q6NZI2 390 aaKnown RBP18.61■□□□□ 0.57
LMNB1-203ENST00000460265 CNTROBQ8N137 903 aa18.61■□□□□ 0.57
LMNB1-203ENST00000460265 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
LMNB1-203ENST00000460265 CABP4P57796 275 aa18.6■□□□□ 0.57
LMNB1-203ENST00000460265 NUCB2P80303 420 aa18.6■□□□□ 0.57
LMNB1-203ENST00000460265 CHAMP1Q96JM3 812 aa18.6■□□□□ 0.57
LMNB1-203ENST00000460265 MYD88Q99836 296 aa18.6■□□□□ 0.57
LMNB1-203ENST00000460265 HSP90AB4PQ58FF6 505 aa18.59■□□□□ 0.57
LMNB1-203ENST00000460265 KLHDC4Q8TBB5 520 aa18.59■□□□□ 0.57
LMNB1-203ENST00000460265 BCL11BQ9C0K0 894 aaPredicted RBP18.59■□□□□ 0.57
LMNB1-203ENST00000460265 KIF2CQ99661 725 aa18.59■□□□□ 0.57
LMNB1-203ENST00000460265 ESYT1Q9BSJ8 1104 aa18.59■□□□□ 0.57
LMNB1-203ENST00000460265 COPS6Q7L5N1 327 aa18.58■□□□□ 0.57
LMNB1-203ENST00000460265 MTERF4Q7Z6M4 381 aaKnown RBP18.58■□□□□ 0.57
LMNB1-203ENST00000460265 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.57
LMNB1-203ENST00000460265 CEP170BQ9Y4F5 1589 aaPredicted RBP18.58■□□□□ 0.57
LMNB1-203ENST00000460265 PKP1Q13835 747 aa18.58■□□□□ 0.56
LMNB1-203ENST00000460265 ARHGEF25Q86VW2 580 aa18.58■□□□□ 0.56
LMNB1-203ENST00000460265 BOLA2Q9H3K6 86 aa18.58■□□□□ 0.56
LMNB1-203ENST00000460265 HDAC5Q9UQL6 1122 aa18.58■□□□□ 0.56
LMNB1-203ENST00000460265 CIZ1Q9ULV3 898 aaPredicted RBP18.58■□□□□ 0.56
LMNB1-203ENST00000460265 NRXN3Q9Y4C0 1643 aa18.57■□□□□ 0.56
LMNB1-203ENST00000460265 REREQ9P2R6 1566 aa18.57■□□□□ 0.56
LMNB1-203ENST00000460265 NEUROD6Q96NK8 337 aa18.57■□□□□ 0.56
LMNB1-203ENST00000460265 CHMLP26374 656 aa18.57■□□□□ 0.56
LMNB1-203ENST00000460265 PLCB2Q00722 1185 aa18.57■□□□□ 0.56
LMNB1-203ENST00000460265 XAGE3Q8WTP9 111 aa18.57■□□□□ 0.56
LMNB1-203ENST00000460265 SYTL4Q96C24 671 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-203ENST00000460265 CCDC85AQ96PX6 553 aaPredicted RBP18.57■□□□□ 0.56
LMNB1-203ENST00000460265 ITSN1Q15811 1721 aa18.56■□□□□ 0.56
LMNB1-203ENST00000460265 SKOR2Q2VWA4 1001 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-203ENST00000460265 SOS1Q07889 1333 aaPredicted RBP18.56■□□□□ 0.56
LMNB1-203ENST00000460265 TERF1P54274 439 aa18.55■□□□□ 0.56
LMNB1-203ENST00000460265 KSR2Q6VAB6 950 aa18.55■□□□□ 0.56
LMNB1-203ENST00000460265 FSD1Q9BTV5 496 aa18.55■□□□□ 0.56
LMNB1-203ENST00000460265 PALD1Q9ULE6 856 aa18.55■□□□□ 0.56
LMNB1-203ENST00000460265 GIGYF1O75420 1035 aaPredicted RBP18.55■□□□□ 0.56
LMNB1-203ENST00000460265 BAG4O95429 457 aaKnown RBP18.55■□□□□ 0.56
LMNB1-203ENST00000460265 KIF24Q5T7B8 1368 aa18.55■□□□□ 0.56
LMNB1-203ENST00000460265 ANKRD26Q9UPS8 1709 aa18.54■□□□□ 0.56
LMNB1-203ENST00000460265 KDRP35968 1356 aa18.54■□□□□ 0.56
LMNB1-203ENST00000460265 RAB11FIP3O75154 756 aa18.54■□□□□ 0.56
LMNB1-203ENST00000460265 RAB3GAP1Q15042 981 aa18.54■□□□□ 0.56
LMNB1-203ENST00000460265 TMX3Q96JJ7 454 aa18.54■□□□□ 0.56
LMNB1-203ENST00000460265 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
LMNB1-203ENST00000460265 CPA1P15085 419 aa18.54■□□□□ 0.56
LMNB1-203ENST00000460265 DNAJC2Q99543 621 aaKnown RBP18.54■□□□□ 0.56
LMNB1-203ENST00000460265 GDPD2Q9HCC8 539 aa18.54■□□□□ 0.56
LMNB1-203ENST00000460265 HYPKQ9NX55 129 aa18.54■□□□□ 0.56
LMNB1-203ENST00000460265 UBE3BQ7Z3V4 1068 aa18.53■□□□□ 0.56
LMNB1-203ENST00000460265 UBR1Q8IWV7 1749 aa18.53■□□□□ 0.56
LMNB1-203ENST00000460265 BEND3Q5T5X7 828 aa18.53■□□□□ 0.56
LMNB1-203ENST00000460265 RUFY2Q8WXA3 655 aa18.53■□□□□ 0.56
LMNB1-203ENST00000460265 ATP10DQ9P241 1426 aa18.52■□□□□ 0.56
LMNB1-203ENST00000460265 ZNF790Q6PG37 636 aa18.52■□□□□ 0.56
LMNB1-203ENST00000460265 IFNL2Q8IZJ0 200 aa18.52■□□□□ 0.56
LMNB1-203ENST00000460265 GRM8O00222 908 aa18.52■□□□□ 0.55
LMNB1-203ENST00000460265 ZNF496Q96IT1 587 aaPredicted RBP18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms