RNA–Protein interactions for RNA: ENST00000460132.5

PLOD3-208, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 3

Gene PLOD3, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-208ENST00000460132 MYBBP1AQ9BQG0 1328 aaKnown RBP19.39■□□□□ 0.69
PLOD3-208ENST00000460132 C4AP0C0L4 1744 aa19.39■□□□□ 0.69
PLOD3-208ENST00000460132 ZPR1O75312 459 aa19.38■□□□□ 0.69
PLOD3-208ENST00000460132 GOLGB1Q14789 3259 aaKnown RBP19.38■□□□□ 0.69
PLOD3-208ENST00000460132 USPL1Q5W0Q7 1092 aa19.38■□□□□ 0.69
PLOD3-208ENST00000460132 PNNQ9H307 717 aaKnown RBP19.38■□□□□ 0.69
PLOD3-208ENST00000460132 PARP3Q9Y6F1 533 aa19.38■□□□□ 0.69
PLOD3-208ENST00000460132 NFE2L2Q16236 605 aa19.37■□□□□ 0.69
PLOD3-208ENST00000460132 NARFQ9UHQ1 456 aa19.37■□□□□ 0.69
PLOD3-208ENST00000460132 COL15A1P39059 1388 aa19.36■□□□□ 0.69
PLOD3-208ENST00000460132 GRIN3BO60391 1043 aa19.36■□□□□ 0.69
PLOD3-208ENST00000460132 EIF5P55010 431 aaKnown RBP19.36■□□□□ 0.69
PLOD3-208ENST00000460132 TAF7Q15545 349 aaPredicted RBP19.36■□□□□ 0.69
PLOD3-208ENST00000460132 MAPK8IP3Q9UPT6 1336 aa19.35■□□□□ 0.69
PLOD3-208ENST00000460132 TM4SF1P30408 202 aa19.35■□□□□ 0.69
PLOD3-208ENST00000460132 DDR1Q08345 913 aa19.35■□□□□ 0.69
PLOD3-208ENST00000460132 MIS18AQ9NYP9 233 aa19.35■□□□□ 0.69
PLOD3-208ENST00000460132 WWC3Q9ULE0 1092 aa19.35■□□□□ 0.69
PLOD3-208ENST00000460132 PRAMEF22A3QJZ6 481 aa19.34■□□□□ 0.69
PLOD3-208ENST00000460132 A1BGP04217 495 aa19.34■□□□□ 0.69
PLOD3-208ENST00000460132 PRKRIP1Q9H875 184 aaPredicted RBP19.34■□□□□ 0.69
PLOD3-208ENST00000460132 BCL2L12Q9HB09 334 aa19.34■□□□□ 0.69
PLOD3-208ENST00000460132 USP16Q9Y5T5 823 aa19.34■□□□□ 0.69
PLOD3-208ENST00000460132 TGFB2P61812 414 aa19.33■□□□□ 0.68
PLOD3-208ENST00000460132 THUMPD2Q9BTF0 503 aaKnown RBP19.33■□□□□ 0.68
PLOD3-208ENST00000460132 C10orf71Q711Q0 1435 aa19.33■□□□□ 0.68
PLOD3-208ENST00000460132 A0A0G2JLW4 131 aa19.32■□□□□ 0.68
PLOD3-208ENST00000460132 POLRMTO00411 1230 aaKnown RBP19.32■□□□□ 0.68
PLOD3-208ENST00000460132 SNRPA1P09661 255 aaKnown RBP19.32■□□□□ 0.68
PLOD3-208ENST00000460132 A0A087WZG4 1122 aa19.31■□□□□ 0.68
PLOD3-208ENST00000460132 IL6STP40189 918 aaPredicted RBP19.31■□□□□ 0.68
PLOD3-208ENST00000460132 NFIXQ14938 502 aa19.31■□□□□ 0.68
PLOD3-208ENST00000460132 ZNF330Q9Y3S2 320 aaPredicted RBP19.31■□□□□ 0.68
PLOD3-208ENST00000460132 PXDNLA1KZ92 1463 aa19.3■□□□□ 0.68
PLOD3-208ENST00000460132 DPEP1P16444 411 aa19.3■□□□□ 0.68
PLOD3-208ENST00000460132 ZNF784Q8NCA9 323 aaPredicted RBP19.3■□□□□ 0.68
PLOD3-208ENST00000460132 TBC1D2BQ9UPU7 963 aa19.3■□□□□ 0.68
PLOD3-208ENST00000460132 PIP4K2AP48426 406 aaPredicted RBP19.29■□□□□ 0.68
PLOD3-208ENST00000460132 RIPK4P57078 832 aa19.29■□□□□ 0.68
PLOD3-208ENST00000460132 PNISRQ8TF01 805 aaKnown RBP19.29■□□□□ 0.68
PLOD3-208ENST00000460132 CHD4Q14839 1912 aa19.29■□□□□ 0.68
PLOD3-208ENST00000460132 DLG5Q8TDM6 1919 aa19.29■□□□□ 0.68
PLOD3-208ENST00000460132 KIF13BQ9NQT8 1826 aa19.28■□□□□ 0.68
PLOD3-208ENST00000460132 TMPOP42166 694 aaKnown RBP19.28■□□□□ 0.68
PLOD3-208ENST00000460132 CCDC146Q8IYE0 955 aa19.28■□□□□ 0.68
PLOD3-208ENST00000460132 WDR43Q15061 677 aaKnown RBP eCLIP19.27■□□□□ 0.68
PLOD3-208ENST00000460132 ADAMTS8Q9UP79 889 aa19.27■□□□□ 0.68
PLOD3-208ENST00000460132 KCNA3P22001 575 aa19.26■□□□□ 0.67
PLOD3-208ENST00000460132 BICDL1Q6ZP65 573 aa19.26■□□□□ 0.67
PLOD3-208ENST00000460132 NPM2Q86SE8 214 aaKnown RBP19.26■□□□□ 0.67
PLOD3-208ENST00000460132 KIAA1551Q9HCM1 1747 aa19.25■□□□□ 0.67
PLOD3-208ENST00000460132 NBPF26B4DH59 902 aa19.25■□□□□ 0.67
PLOD3-208ENST00000460132 SERPINB2P05120 415 aa19.25■□□□□ 0.67
PLOD3-208ENST00000460132 EIF4A1P60842 406 aaKnown RBP19.25■□□□□ 0.67
PLOD3-208ENST00000460132 TBC1D9BQ66K14 1250 aa19.25■□□□□ 0.67
PLOD3-208ENST00000460132 NBPF10Q6P3W6 841 aaKnown RBP19.25■□□□□ 0.67
PLOD3-208ENST00000460132 NBPF15Q8N660 670 aa19.25■□□□□ 0.67
PLOD3-208ENST00000460132 BCS1LQ9Y276 419 aa19.25■□□□□ 0.67
PLOD3-208ENST00000460132 RRP7AQ9Y3A4 280 aaKnown RBP19.25■□□□□ 0.67
PLOD3-208ENST00000460132 N4BP2Q86UW6 1770 aaPredicted RBP19.24■□□□□ 0.67
PLOD3-208ENST00000460132 CAMTA2O94983 1202 aa19.24■□□□□ 0.67
PLOD3-208ENST00000460132 DZIP3Q86Y13 1208 aaKnown RBP19.24■□□□□ 0.67
PLOD3-208ENST00000460132 RUNDC1Q96C34 613 aa19.24■□□□□ 0.67
PLOD3-208ENST00000460132 GIGYF1O75420 1035 aaPredicted RBP19.23■□□□□ 0.67
PLOD3-208ENST00000460132 CHRNA5P30532 468 aa19.23■□□□□ 0.67
PLOD3-208ENST00000460132 NEUROD2Q15784 382 aa19.23■□□□□ 0.67
PLOD3-208ENST00000460132 ZNF316A6NFI3 1004 aaPredicted RBP19.22■□□□□ 0.67
PLOD3-208ENST00000460132 LMOD3Q0VAK6 560 aa19.22■□□□□ 0.67
PLOD3-208ENST00000460132 PIM2Q9P1W9 311 aa19.22■□□□□ 0.67
PLOD3-208ENST00000460132 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
PLOD3-208ENST00000460132 KDM3BQ7LBC6 1761 aa19.2■□□□□ 0.66
PLOD3-208ENST00000460132 TRIM35Q9UPQ4 493 aa19.2■□□□□ 0.66
PLOD3-208ENST00000460132 DALRD3Q5D0E6 543 aaKnown RBP19.19■□□□□ 0.66
PLOD3-208ENST00000460132 SETDB2Q96T68 719 aa19.19■□□□□ 0.66
PLOD3-208ENST00000460132 NRXN2Q9P2S2 1712 aa19.18■□□□□ 0.66
PLOD3-208ENST00000460132 CLEC4GQ6UXB4 293 aa19.18■□□□□ 0.66
PLOD3-208ENST00000460132 ARHGAP27Q6ZUM4 889 aa19.18■□□□□ 0.66
PLOD3-208ENST00000460132 BABAM1Q9NWV8 329 aa19.18■□□□□ 0.66
PLOD3-208ENST00000460132 AFDNP55196 1824 aaKnown RBP19.18■□□□□ 0.66
PLOD3-208ENST00000460132 SCN7AQ01118 1682 aa19.17■□□□□ 0.66
PLOD3-208ENST00000460132 CCDC24Q8N4L8 307 aa19.17■□□□□ 0.66
PLOD3-208ENST00000460132 NGEFQ8N5V2 710 aa19.17■□□□□ 0.66
PLOD3-208ENST00000460132 CARMIL3Q8ND23 1372 aa19.17■□□□□ 0.66
PLOD3-208ENST00000460132 CCDC184Q52MB2 194 aa19.16■□□□□ 0.66
PLOD3-208ENST00000460132 PRR5LQ6MZQ0 368 aa19.16■□□□□ 0.66
PLOD3-208ENST00000460132 C2CD5Q86YS7 1000 aa19.16■□□□□ 0.66
PLOD3-208ENST00000460132 BRIP1Q9BX63 1249 aa19.15■□□□□ 0.66
PLOD3-208ENST00000460132 ZNF652Q9Y2D9 606 aa19.15■□□□□ 0.66
PLOD3-208ENST00000460132 BRCA1P38398 1863 aaKnown RBP19.15■□□□□ 0.66
PLOD3-208ENST00000460132 H0YIN7 160 aa19.14■□□□□ 0.65
PLOD3-208ENST00000460132 CHL1O00533 1208 aa19.14■□□□□ 0.65
PLOD3-208ENST00000460132 MYL6BP14649 208 aa19.14■□□□□ 0.65
PLOD3-208ENST00000460132 HLFQ16534 295 aa19.14■□□□□ 0.65
PLOD3-208ENST00000460132 LAS1LQ9Y4W2 734 aaKnown RBP19.14■□□□□ 0.65
PLOD3-208ENST00000460132 APAF1O14727 1248 aa19.13■□□□□ 0.65
PLOD3-208ENST00000460132 RGL2O15211 777 aa19.13■□□□□ 0.65
PLOD3-208ENST00000460132 CNBD1Q8NA66 436 aa19.13■□□□□ 0.65
PLOD3-208ENST00000460132 ADCY9O60503 1353 aa19.13■□□□□ 0.65
PLOD3-208ENST00000460132 ATP10DQ9P241 1426 aa19.13■□□□□ 0.65
PLOD3-208ENST00000460132 LAMB4A4D0S4 1761 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms