RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 TEAD4Q15561 434 aa9.38□□□□□ -0.91
CCDC50-203ENST00000460064 SLC27A3Q5K4L6 730 aa9.38□□□□□ -0.91
CCDC50-203ENST00000460064 PPARGC1BQ86YN6 1023 aaKnown RBP9.38□□□□□ -0.91
CCDC50-203ENST00000460064 MEIOBQ8N635 442 aa9.38□□□□□ -0.91
CCDC50-203ENST00000460064 HELQQ8TDG4 1101 aa9.38□□□□□ -0.91
CCDC50-203ENST00000460064 SAP130Q9H0E3 1048 aa9.38□□□□□ -0.91
CCDC50-203ENST00000460064 HCN4Q9Y3Q4 1203 aa9.38□□□□□ -0.91
CCDC50-203ENST00000460064 UPP2O95045 317 aa9.37□□□□□ -0.91
CCDC50-203ENST00000460064 L3MBTL2Q969R5 705 aa9.37□□□□□ -0.91
CCDC50-203ENST00000460064 NGLY1Q96IV0 654 aa9.37□□□□□ -0.91
CCDC50-203ENST00000460064 PDZRN3Q9UPQ7 1066 aa9.37□□□□□ -0.91
CCDC50-203ENST00000460064 PARP3Q9Y6F1 533 aa9.37□□□□□ -0.91
CCDC50-203ENST00000460064 FAM13AO94988 1023 aa9.36□□□□□ -0.91
CCDC50-203ENST00000460064 RANGAP1P46060 587 aaPredicted RBP9.36□□□□□ -0.91
CCDC50-203ENST00000460064 COX20Q5RI15 118 aa9.36□□□□□ -0.91
CCDC50-203ENST00000460064 INSM2Q96T92 566 aaPredicted RBP9.36□□□□□ -0.91
CCDC50-203ENST00000460064 NIFKQ9BYG3 293 aaKnown RBP9.36□□□□□ -0.91
CCDC50-203ENST00000460064 EML1O00423 815 aa9.35□□□□□ -0.91
CCDC50-203ENST00000460064 ECM1Q16610 540 aa9.35□□□□□ -0.91
CCDC50-203ENST00000460064 SH3PXD2AQ5TCZ1 1133 aa9.35□□□□□ -0.91
CCDC50-203ENST00000460064 ZDHHC1Q8WTX9 485 aa9.35□□□□□ -0.91
CCDC50-203ENST00000460064 GRIP2Q9C0E4 1043 aa9.35□□□□□ -0.91
CCDC50-203ENST00000460064 POLMQ9NP87 494 aaPredicted RBP9.35□□□□□ -0.91
CCDC50-203ENST00000460064 GPC1P35052 558 aa9.34□□□□□ -0.91
CCDC50-203ENST00000460064 RNF144AP50876 292 aaPredicted RBP9.34□□□□□ -0.91
CCDC50-203ENST00000460064 GNASQ5JWF2 1037 aa9.34□□□□□ -0.91
CCDC50-203ENST00000460064 ALDH16A1Q8IZ83 802 aa9.34□□□□□ -0.91
CCDC50-203ENST00000460064 LINC00528Q8N1L1 170 aa9.34□□□□□ -0.91
CCDC50-203ENST00000460064 RHBDD1Q8TEB9 315 aa9.34□□□□□ -0.91
CCDC50-203ENST00000460064 QTRT2Q9H974 415 aaKnown RBP9.34□□□□□ -0.91
CCDC50-203ENST00000460064 SPINT1O43278 529 aa9.33□□□□□ -0.92
CCDC50-203ENST00000460064 BMP2P12643 396 aa9.33□□□□□ -0.92
CCDC50-203ENST00000460064 ERCC3P19447 782 aa9.33□□□□□ -0.92
CCDC50-203ENST00000460064 MAPK1P28482 360 aa9.33□□□□□ -0.92
CCDC50-203ENST00000460064 AAMPQ13685 434 aa9.33□□□□□ -0.92
CCDC50-203ENST00000460064 POTEAQ6S8J7 498 aa9.33□□□□□ -0.92
CCDC50-203ENST00000460064 DNAJC14Q6Y2X3 702 aaPredicted RBP9.33□□□□□ -0.92
CCDC50-203ENST00000460064 STIM2Q9P246 746 aa9.33□□□□□ -0.92
CCDC50-203ENST00000460064 LRFN2Q9ULH4 789 aa9.33□□□□□ -0.92
CCDC50-203ENST00000460064 AMOTL2Q9Y2J4 779 aa9.33□□□□□ -0.92
CCDC50-203ENST00000460064 RGS20O76081 388 aa9.32□□□□□ -0.92
CCDC50-203ENST00000460064 NPR3P17342 541 aa9.32□□□□□ -0.92
CCDC50-203ENST00000460064 MPSTP25325 297 aa9.32□□□□□ -0.92
CCDC50-203ENST00000460064 RBM25P49756 843 aaKnown RBP9.32□□□□□ -0.92
CCDC50-203ENST00000460064 ARHGAP4P98171 946 aa9.32□□□□□ -0.92
CCDC50-203ENST00000460064 ZNF295-AS1Q8N0V1 137 aa9.32□□□□□ -0.92
CCDC50-203ENST00000460064 DCTN4Q9UJW0 460 aa9.32□□□□□ -0.92
CCDC50-203ENST00000460064 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
CCDC50-203ENST00000460064 BRD2P25440 801 aaKnown RBP9.31□□□□□ -0.92
CCDC50-203ENST00000460064 CTSOP43234 321 aaPredicted RBP9.31□□□□□ -0.92
CCDC50-203ENST00000460064 HIRAP54198 1017 aaPredicted RBP9.31□□□□□ -0.92
CCDC50-203ENST00000460064 C6orf118Q5T5N4 469 aa9.31□□□□□ -0.92
CCDC50-203ENST00000460064 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
CCDC50-203ENST00000460064 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
CCDC50-203ENST00000460064 MYO19Q96H55 970 aa9.31□□□□□ -0.92
CCDC50-203ENST00000460064 PHACTR1Q9C0D0 580 aa9.31□□□□□ -0.92
CCDC50-203ENST00000460064 ANKRD33BA6NCL7 494 aa9.3□□□□□ -0.92
CCDC50-203ENST00000460064 PHKA2P46019 1235 aa9.3□□□□□ -0.92
CCDC50-203ENST00000460064 C11orf91Q3C1V1 193 aa9.3□□□□□ -0.92
CCDC50-203ENST00000460064 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
CCDC50-203ENST00000460064 NOM1Q5C9Z4 860 aaKnown RBP9.3□□□□□ -0.92
CCDC50-203ENST00000460064 TNFRSF10BO14763 440 aa9.29□□□□□ -0.92
CCDC50-203ENST00000460064 PLA2G4AP47712 749 aa9.29□□□□□ -0.92
CCDC50-203ENST00000460064 POU4F2Q12837 409 aa9.29□□□□□ -0.92
CCDC50-203ENST00000460064 DGKZQ13574 1117 aa9.29□□□□□ -0.92
CCDC50-203ENST00000460064 RTN1Q16799 776 aa9.29□□□□□ -0.92
CCDC50-203ENST00000460064 ALKBH2Q6NS38 261 aa9.29□□□□□ -0.92
CCDC50-203ENST00000460064 MRPL14Q6P1L8 145 aaKnown RBP9.29□□□□□ -0.92
CCDC50-203ENST00000460064 PRICKLE2Q7Z3G6 844 aa9.29□□□□□ -0.92
CCDC50-203ENST00000460064 TXLNAP40222 546 aa9.28□□□□□ -0.92
CCDC50-203ENST00000460064 EIF1AXP47813 144 aaKnown RBP9.28□□□□□ -0.92
CCDC50-203ENST00000460064 SCARF1Q14162 830 aa9.28□□□□□ -0.92
CCDC50-203ENST00000460064 C1orf53Q5VUE5 145 aa9.28□□□□□ -0.92
CCDC50-203ENST00000460064 ZSCAN29Q8IWY8 852 aaPredicted RBP9.28□□□□□ -0.92
CCDC50-203ENST00000460064 KLK14Q9P0G3 267 aa9.28□□□□□ -0.92
CCDC50-203ENST00000460064 BRPF3Q9ULD4 1205 aa9.28□□□□□ -0.92
CCDC50-203ENST00000460064 SPATA31C2B4DYI2 1134 aa9.27□□□□□ -0.93
CCDC50-203ENST00000460064 ABTB2Q8N961 1025 aa9.27□□□□□ -0.93
CCDC50-203ENST00000460064 IFT43Q96FT9 208 aa9.27□□□□□ -0.93
CCDC50-203ENST00000460064 ZBTB39O15060 712 aa9.26□□□□□ -0.93
CCDC50-203ENST00000460064 NDUFB5O43674 189 aa9.26□□□□□ -0.93
CCDC50-203ENST00000460064 AVPP01185 164 aa9.26□□□□□ -0.93
CCDC50-203ENST00000460064 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
CCDC50-203ENST00000460064 LYSMD3Q7Z3D4 306 aa9.26□□□□□ -0.93
CCDC50-203ENST00000460064 TMC1Q8TDI8 760 aa9.26□□□□□ -0.93
CCDC50-203ENST00000460064 ASB16Q96NS5 453 aa9.26□□□□□ -0.93
CCDC50-203ENST00000460064 FIGNL2A6NMB9 653 aa9.25□□□□□ -0.93
CCDC50-203ENST00000460064 GFRA3O60609 400 aa9.25□□□□□ -0.93
CCDC50-203ENST00000460064 PKDCCQ504Y2 493 aa9.25□□□□□ -0.93
CCDC50-203ENST00000460064 RNF217Q8TC41 542 aa9.25□□□□□ -0.93
CCDC50-203ENST00000460064 RHPN1Q8TCX5 695 aa9.25□□□□□ -0.93
CCDC50-203ENST00000460064 CCDC87Q9NVE4 849 aa9.25□□□□□ -0.93
CCDC50-203ENST00000460064 TTLL8A6PVC2 850 aa9.24□□□□□ -0.93
CCDC50-203ENST00000460064 TATP17735 454 aaPredicted RBP9.24□□□□□ -0.93
CCDC50-203ENST00000460064 FAM26DQ5JW98 314 aa9.24□□□□□ -0.93
CCDC50-203ENST00000460064 NBPF10Q6P3W6 841 aaKnown RBP9.24□□□□□ -0.93
CCDC50-203ENST00000460064 ATCAYQ86WG3 371 aa9.24□□□□□ -0.93
CCDC50-203ENST00000460064 ETFBKMTQ8IXQ9 262 aa9.24□□□□□ -0.93
CCDC50-203ENST00000460064 BCL2L13Q9BXK5 485 aa9.24□□□□□ -0.93
CCDC50-203ENST00000460064 ZDHHC3Q9NYG2 299 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms