RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 TMPOP42166 694 aaKnown RBP18.81■□□□□ 0.6
THBS3-204ENST00000460050 RIPK4P57078 832 aa18.81■□□□□ 0.6
THBS3-204ENST00000460050 NLGN1Q8N2Q7 840 aa18.81■□□□□ 0.6
THBS3-204ENST00000460050 SRP68Q9UHB9 627 aaKnown RBP18.81■□□□□ 0.6
THBS3-204ENST00000460050 COL15A1P39059 1388 aa18.81■□□□□ 0.6
THBS3-204ENST00000460050 USP42Q9H9J4 1324 aaKnown RBP18.8■□□□□ 0.6
THBS3-204ENST00000460050 MMP10P09238 476 aa18.8■□□□□ 0.6
THBS3-204ENST00000460050 NLGN2Q8NFZ4 835 aa18.8■□□□□ 0.6
THBS3-204ENST00000460050 RUNDC1Q96C34 613 aa18.8■□□□□ 0.6
THBS3-204ENST00000460050 MIS18AQ9NYP9 233 aa18.8■□□□□ 0.6
THBS3-204ENST00000460050 KDM3BQ7LBC6 1761 aa18.8■□□□□ 0.6
THBS3-204ENST00000460050 CANXP27824 592 aaKnown RBP18.79■□□□□ 0.6
THBS3-204ENST00000460050 RRP7AQ9Y3A4 280 aaKnown RBP18.79■□□□□ 0.6
THBS3-204ENST00000460050 GOLGB1Q14789 3259 aaKnown RBP18.78■□□□□ 0.6
THBS3-204ENST00000460050 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
THBS3-204ENST00000460050 PNISRQ8TF01 805 aaKnown RBP18.78■□□□□ 0.6
THBS3-204ENST00000460050 PRAMEF22A3QJZ6 481 aa18.77■□□□□ 0.6
THBS3-204ENST00000460050 ANP32CO43423 234 aa18.77■□□□□ 0.6
THBS3-204ENST00000460050 SNRPA1P09661 255 aaKnown RBP18.77■□□□□ 0.6
THBS3-204ENST00000460050 CD2APQ9Y5K6 639 aa18.77■□□□□ 0.6
THBS3-204ENST00000460050 ZPR1O75312 459 aa18.76■□□□□ 0.59
THBS3-204ENST00000460050 EIF5P55010 431 aaKnown RBP18.76■□□□□ 0.59
THBS3-204ENST00000460050 FKBP8Q14318 412 aa18.76■□□□□ 0.59
THBS3-204ENST00000460050 NEUROD2Q15784 382 aa18.76■□□□□ 0.59
THBS3-204ENST00000460050 CCDC184Q52MB2 194 aa18.76■□□□□ 0.59
THBS3-204ENST00000460050 USP16Q9Y5T5 823 aa18.76■□□□□ 0.59
THBS3-204ENST00000460050 A1BGP04217 495 aa18.75■□□□□ 0.59
THBS3-204ENST00000460050 USPL1Q5W0Q7 1092 aa18.75■□□□□ 0.59
THBS3-204ENST00000460050 NARFQ9UHQ1 456 aa18.75■□□□□ 0.59
THBS3-204ENST00000460050 LAMB4A4D0S4 1761 aa18.74■□□□□ 0.59
THBS3-204ENST00000460050 ZNF330Q9Y3S2 320 aaPredicted RBP18.74■□□□□ 0.59
THBS3-204ENST00000460050 PARP3Q9Y6F1 533 aa18.74■□□□□ 0.59
THBS3-204ENST00000460050 UTRNP46939 3433 aa18.74■□□□□ 0.59
THBS3-204ENST00000460050 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
THBS3-204ENST00000460050 TSPYL4Q9UJ04 414 aa18.73■□□□□ 0.59
THBS3-204ENST00000460050 KIF13BQ9NQT8 1826 aa18.72■□□□□ 0.59
THBS3-204ENST00000460050 A0A087WZG4 1122 aa18.72■□□□□ 0.59
THBS3-204ENST00000460050 EIF4A1P60842 406 aaKnown RBP18.72■□□□□ 0.59
THBS3-204ENST00000460050 PELP1Q8IZL8 1130 aaKnown RBP18.72■□□□□ 0.59
THBS3-204ENST00000460050 TRIM35Q9UPQ4 493 aa18.72■□□□□ 0.59
THBS3-204ENST00000460050 C10orf71Q711Q0 1435 aa18.72■□□□□ 0.59
THBS3-204ENST00000460050 SCN7AQ01118 1682 aa18.72■□□□□ 0.59
THBS3-204ENST00000460050 PIP4K2AP48426 406 aaPredicted RBP18.71■□□□□ 0.59
THBS3-204ENST00000460050 DDR1Q08345 913 aa18.71■□□□□ 0.59
THBS3-204ENST00000460050 GPR162Q16538 588 aa18.71■□□□□ 0.59
THBS3-204ENST00000460050 BCL2L12Q9HB09 334 aa18.71■□□□□ 0.59
THBS3-204ENST00000460050 GIGYF1O75420 1035 aaPredicted RBP18.7■□□□□ 0.58
THBS3-204ENST00000460050 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
THBS3-204ENST00000460050 MRS2Q9HD23 443 aa18.7■□□□□ 0.58
THBS3-204ENST00000460050 APAF1O14727 1248 aa18.69■□□□□ 0.58
THBS3-204ENST00000460050 TM4SF1P30408 202 aa18.69■□□□□ 0.58
THBS3-204ENST00000460050 BABAM1Q9NWV8 329 aa18.69■□□□□ 0.58
THBS3-204ENST00000460050 TBC1D2BQ9UPU7 963 aa18.69■□□□□ 0.58
THBS3-204ENST00000460050 KIAA1551Q9HCM1 1747 aa18.69■□□□□ 0.58
THBS3-204ENST00000460050 POLRMTO00411 1230 aaKnown RBP18.68■□□□□ 0.58
THBS3-204ENST00000460050 NFIXQ14938 502 aa18.68■□□□□ 0.58
THBS3-204ENST00000460050 BCORQ6W2J9 1755 aa18.68■□□□□ 0.58
THBS3-204ENST00000460050 AFDNP55196 1824 aaKnown RBP18.67■□□□□ 0.58
THBS3-204ENST00000460050 PXDNLA1KZ92 1463 aa18.67■□□□□ 0.58
THBS3-204ENST00000460050 NBPF26B4DH59 902 aa18.67■□□□□ 0.58
THBS3-204ENST00000460050 NBPF10Q6P3W6 841 aaKnown RBP18.67■□□□□ 0.58
THBS3-204ENST00000460050 DZIP3Q86Y13 1208 aaKnown RBP18.67■□□□□ 0.58
THBS3-204ENST00000460050 NBPF15Q8N660 670 aa18.67■□□□□ 0.58
THBS3-204ENST00000460050 N4BP2Q86UW6 1770 aaPredicted RBP18.66■□□□□ 0.58
THBS3-204ENST00000460050 CAMTA2O94983 1202 aa18.66■□□□□ 0.58
THBS3-204ENST00000460050 YBX3P16989 372 aaKnown RBP eCLIP18.66■□□□□ 0.58
THBS3-204ENST00000460050 CHD4Q14839 1912 aa18.66■□□□□ 0.58
THBS3-204ENST00000460050 BICDL1Q6ZP65 573 aa18.65■□□□□ 0.58
THBS3-204ENST00000460050 WWC3Q9ULE0 1092 aa18.65■□□□□ 0.58
THBS3-204ENST00000460050 LAS1LQ9Y4W2 734 aaKnown RBP18.65■□□□□ 0.58
THBS3-204ENST00000460050 NRXN2Q9P2S2 1712 aa18.65■□□□□ 0.58
THBS3-204ENST00000460050 CHL1O00533 1208 aa18.64■□□□□ 0.57
THBS3-204ENST00000460050 YY1P25490 414 aa18.64■□□□□ 0.57
THBS3-204ENST00000460050 TGFB2P61812 414 aa18.64■□□□□ 0.57
THBS3-204ENST00000460050 TBC1D9BQ66K14 1250 aa18.64■□□□□ 0.57
THBS3-204ENST00000460050 A0A0G2JLW4 131 aa18.63■□□□□ 0.57
THBS3-204ENST00000460050 SERPINB2P05120 415 aa18.63■□□□□ 0.57
THBS3-204ENST00000460050 GRIN3BO60391 1043 aa18.61■□□□□ 0.57
THBS3-204ENST00000460050 DPEP1P16444 411 aa18.61■□□□□ 0.57
THBS3-204ENST00000460050 CFAP44Q96MT7 982 aa18.61■□□□□ 0.57
THBS3-204ENST00000460050 BRCA1P38398 1863 aaKnown RBP18.6■□□□□ 0.57
THBS3-204ENST00000460050 CARMIL3Q8ND23 1372 aa18.6■□□□□ 0.57
THBS3-204ENST00000460050 ERBB4Q15303 1308 aa18.6■□□□□ 0.57
THBS3-204ENST00000460050 MYL6BP14649 208 aa18.6■□□□□ 0.57
THBS3-204ENST00000460050 EIF2S2P20042 333 aaKnown RBP18.6■□□□□ 0.57
THBS3-204ENST00000460050 KRT24Q2M2I5 525 aa18.6■□□□□ 0.57
THBS3-204ENST00000460050 NGEFQ8N5V2 710 aa18.6■□□□□ 0.57
THBS3-204ENST00000460050 ZNF652Q9Y2D9 606 aa18.6■□□□□ 0.57
THBS3-204ENST00000460050 SENP3-EIF4A1A0A087X0R7 540 aa18.59■□□□□ 0.57
THBS3-204ENST00000460050 CALD1Q05682 793 aaKnown RBP18.59■□□□□ 0.57
THBS3-204ENST00000460050 CLEC4GQ6UXB4 293 aa18.59■□□□□ 0.57
THBS3-204ENST00000460050 SETDB2Q96T68 719 aa18.59■□□□□ 0.57
THBS3-204ENST00000460050 ZNF853P0CG23 659 aa18.58■□□□□ 0.56
THBS3-204ENST00000460050 MBIPQ9NS73 344 aa18.58■□□□□ 0.56
THBS3-204ENST00000460050 RGL2O15211 777 aa18.57■□□□□ 0.56
THBS3-204ENST00000460050 KCNA3P22001 575 aa18.57■□□□□ 0.56
THBS3-204ENST00000460050 CHRNA5P30532 468 aa18.57■□□□□ 0.56
THBS3-204ENST00000460050 GNAI1P63096 354 aa18.57■□□□□ 0.56
THBS3-204ENST00000460050 TTLL7Q6ZT98 887 aa18.57■□□□□ 0.56
THBS3-204ENST00000460050 IFT57Q9NWB7 429 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms